SIMILAR PATTERN OF AMINO ACIDS MAPPED TO '1yq9'
List of Similar Pattern of Amino Acids| DrReposER ID / Desc. | Hit PDBID |
Hit Macromolecule |
Res. Matches |
Interface | HETATM | RMSD | Dali Z-score |
Seq. Identity (%) |
View | Dock | |
|---|---|---|---|---|---|---|---|---|---|---|---|
| 1D4F_C_ADNC603_2 (S-ADENOSYLHOMOCYSTEINE HYDROLASE) |
1yq9 | PERIPLASMIC [NIFE]HYDROGENASE SMALLSUBUNIT (Desulfovibriogigas) | 4 / 5 | GLU A 22THR A 18HIS A 13LEU A 48 | None | 1.20A | 1d4fC-1yq9A:4.8 | 1d4fC-1yq9A:20.96 | |||
| 1FK9_A_EFZA999_1 (HIV-1 RT, A-CHAIN) |
1yq9 | PERIPLASMIC [NIFE]HYDROGENASE SMALLSUBUNIT (Desulfovibriogigas) | 5 / 10 | LEU A 60VAL A 87GLY A 88LEU A 12TYR A 44 | GOL A1272 (-4.0A)NoneGOL A1271 (-3.8A)NoneNone | 1.13A | 1fk9A-1yq9A:undetectable | 1fk9A-1yq9A:19.69 | |||
| 1FKO_A_EFZA999_1 (HIV-1 RT, A-CHAIN) |
1yq9 | PERIPLASMIC [NIFE]HYDROGENASE SMALLSUBUNIT (Desulfovibriogigas) | 5 / 10 | LEU A 60VAL A 87GLY A 88LEU A 12TYR A 44 | GOL A1272 (-4.0A)NoneGOL A1271 (-3.8A)NoneNone | 1.23A | 1fkoA-1yq9A:undetectable | 1fkoA-1yq9A:19.69 | |||
| 1FKP_A_NVPA999_1 (HIV-1 RT, A-CHAIN) |
1yq9 | PERIPLASMIC [NIFE]HYDROGENASE SMALLSUBUNIT (Desulfovibriogigas) | 5 / 11 | LEU A 60VAL A 87GLY A 88LEU A 12TYR A 44 | GOL A1272 (-4.0A)NoneGOL A1271 (-3.8A)NoneNone | 1.17A | 1fkpA-1yq9A:undetectable | 1fkpA-1yq9A:19.69 | |||
| 1IKV_A_EFZA2000_1 (POL POLYPROTEIN) |
1yq9 | PERIPLASMIC [NIFE]HYDROGENASE SMALLSUBUNIT (Desulfovibriogigas) | 5 / 9 | LEU A 60VAL A 87GLY A 88LEU A 12TYR A 44 | GOL A1272 (-4.0A)NoneGOL A1271 (-3.8A)NoneNone | 1.20A | 1ikvA-1yq9A:undetectable | 1ikvA-1yq9A:19.14 | |||
| 1JKH_A_EFZA999_1 (HIV-1 RT, A-CHAINHIV-1 RT, B-CHAIN) |
1yq9 | PERIPLASMIC [NIFE]HYDROGENASE SMALLSUBUNIT (Desulfovibriogigas) | 5 / 11 | LEU A 60VAL A 87GLY A 88LEU A 12TYR A 44 | GOL A1272 (-4.0A)NoneGOL A1271 (-3.8A)NoneNone | 1.18A | 1jkhA-1yq9A:undetectable1jkhB-1yq9A:undetectable | 1jkhA-1yq9A:19.441jkhB-1yq9A:19.18 | |||
| 1JLB_A_NVPA999_1 (HIV-1 RT A-CHAIN) |
1yq9 | PERIPLASMIC [NIFE]HYDROGENASE SMALLSUBUNIT (Desulfovibriogigas) | 5 / 8 | LEU A 60VAL A 87GLY A 88LEU A 12TYR A 44 | GOL A1272 (-4.0A)NoneGOL A1271 (-3.8A)NoneNone | 1.17A | 1jlbA-1yq9A:undetectable | 1jlbA-1yq9A:19.44 | |||
| 1KIA_B_SAMB1293_0 (GLYCINEN-METHYLTRANSFERASE) |
1yq9 | PERIPLASMIC [NIFE]HYDROGENASE SMALLSUBUNIT (Desulfovibriogigas) | 5 / 12 | ILE A 72GLY A 116VAL A 131ALA A 121GLY A 110 | NoneH2S A1268 ( 4.4A)NoneNoneSF4 A 267 ( 3.7A) | 1.17A | 1kiaB-1yq9A:undetectable | 1kiaB-1yq9A:22.39 | |||
| 1LW0_A_NVPA999_1 (HIV-1 REVERSETRANSCRIPTASE) |
1yq9 | PERIPLASMIC [NIFE]HYDROGENASE SMALLSUBUNIT (Desulfovibriogigas) | 5 / 10 | LEU A 60VAL A 87GLY A 88LEU A 12TYR A 44 | GOL A1272 (-4.0A)NoneGOL A1271 (-3.8A)NoneNone | 1.12A | 1lw0A-1yq9A:undetectable | 1lw0A-1yq9A:19.44 | |||
| 1LWC_A_NVPA999_1 (HIV-1 REVERSETRANSCRIPTASE) |
1yq9 | PERIPLASMIC [NIFE]HYDROGENASE SMALLSUBUNIT (Desulfovibriogigas) | 5 / 11 | LEU A 60VAL A 87GLY A 88LEU A 12TYR A 44 | GOL A1272 (-4.0A)NoneGOL A1271 (-3.8A)NoneNone | 1.13A | 1lwcA-1yq9A:undetectable | 1lwcA-1yq9A:19.25 | |||
| 1LWF_A_NVPA999_1 (HIV-1 REVERSETRANSCRIPTASE) |
1yq9 | PERIPLASMIC [NIFE]HYDROGENASE SMALLSUBUNIT (Desulfovibriogigas) | 5 / 9 | LEU A 60VAL A 87GLY A 88LEU A 12TYR A 44 | GOL A1272 (-4.0A)NoneGOL A1271 (-3.8A)NoneNone | 1.18A | 1lwfA-1yq9A:undetectable | 1lwfA-1yq9A:19.25 | |||
| 1VRT_A_NVPA999_1 (HIV-1 REVERSETRANSCRIPTASE) |
1yq9 | PERIPLASMIC [NIFE]HYDROGENASE SMALLSUBUNIT (Desulfovibriogigas) | 5 / 9 | LEU A 60VAL A 87GLY A 88LEU A 12TYR A 44 | GOL A1272 (-4.0A)NoneGOL A1271 (-3.8A)NoneNone | 1.16A | 1vrtA-1yq9A:undetectable | 1vrtA-1yq9A:19.44 | |||
| 1WG8_A_SAMA3142_0 (PREDICTEDS-ADENOSYLMETHIONINE-DEPENDENTMETHYLTRANSFERASE) |
1yq9 | PERIPLASMIC [NIFE]HYDROGENASE SMALLSUBUNIT (Desulfovibriogigas) | 5 / 12 | GLY A 74GLY A 75GLY A 130PHE A 155HIS A 13 | SF4 A 267 ( 4.9A)NoneNoneNoneNone | 1.04A | 1wg8A-1yq9A:undetectable | 1wg8A-1yq9A:23.55 | |||
| 1WG8_B_SAMB3141_0 (PREDICTEDS-ADENOSYLMETHIONINE-DEPENDENTMETHYLTRANSFERASE) |
1yq9 | PERIPLASMIC [NIFE]HYDROGENASE SMALLSUBUNIT (Desulfovibriogigas) | 5 / 12 | GLY A 74GLY A 75GLY A 130PHE A 155HIS A 13 | SF4 A 267 ( 4.9A)NoneNoneNoneNone | 0.99A | 1wg8B-1yq9A:undetectable | 1wg8B-1yq9A:23.55 | |||
| 2HND_A_NVPA999_1 (REVERSETRANSCRIPTASE/RIBONUCLEASE H) |
1yq9 | PERIPLASMIC [NIFE]HYDROGENASE SMALLSUBUNIT (Desulfovibriogigas) | 5 / 10 | LEU A 60VAL A 87GLY A 88LEU A 12TYR A 44 | GOL A1272 (-4.0A)NoneGOL A1271 (-3.8A)NoneNone | 1.14A | 2hndA-1yq9A:undetectable | 2hndA-1yq9A:19.69 | |||
| 2HNY_A_NVPA999_1 (REVERSETRANSCRIPTASE/RIBONUCLEASE H) |
1yq9 | PERIPLASMIC [NIFE]HYDROGENASE SMALLSUBUNIT (Desulfovibriogigas) | 5 / 10 | LEU A 60VAL A 87GLY A 88LEU A 12TYR A 44 | GOL A1272 (-4.0A)NoneGOL A1271 (-3.8A)NoneNone | 1.13A | 2hnyA-1yq9A:undetectable | 2hnyA-1yq9A:19.69 | |||
| 2Q63_A_1UNA1001_4 (PROTEASE RETROPEPSIN) |
1yq9 | PERIPLASMIC [NIFE]HYDROGENASE SMALLSUBUNIT (Desulfovibriogigas) | 3 / 3 | ASP A 256ASN A 253THR A 114 | None | 0.77A | 2q63B-1yq9A:undetectable | 2q63B-1yq9A:17.83 | |||
| 3AVP_A_MV2A313_1 (PANTOTHENATE KINASE) |
1yq9 | PERIPLASMIC [NIFE]HYDROGENASE SMALLSUBUNIT (Desulfovibriogigas) | 4 / 7 | VAL A 24HIS A 13LEU A 25ILE A 40 | None | 1.04A | 3avpA-1yq9A:undetectable | 3avpA-1yq9A:21.01 | |||
| 3ETE_A_H3PA552_1 (GLUTAMATEDEHYDROGENASE) |
1yq9 | PERIPLASMIC [NIFE]HYDROGENASE SMALLSUBUNIT (Desulfovibriogigas) | 4 / 6 | ILE A 95TYR A 93ILE A 72HIS A 13 | None | 1.03A | 3eteA-1yq9A:undetectable3eteE-1yq9A:undetectable | 3eteA-1yq9A:19.683eteE-1yq9A:19.68 | |||
| 3ETE_C_H3PC554_1 (GLUTAMATEDEHYDROGENASE) |
1yq9 | PERIPLASMIC [NIFE]HYDROGENASE SMALLSUBUNIT (Desulfovibriogigas) | 4 / 5 | ILE A 95TYR A 93ILE A 72HIS A 13 | None | 1.03A | 3eteB-1yq9A:undetectable3eteC-1yq9A:undetectable | 3eteB-1yq9A:19.683eteC-1yq9A:19.68 | |||
| 3ETE_F_H3PF552_1 (GLUTAMATEDEHYDROGENASE) |
1yq9 | PERIPLASMIC [NIFE]HYDROGENASE SMALLSUBUNIT (Desulfovibriogigas) | 4 / 7 | ILE A 72HIS A 13ILE A 95TYR A 93 | None | 1.03A | 3eteD-1yq9A:undetectable3eteF-1yq9A:undetectable | 3eteD-1yq9A:19.683eteF-1yq9A:19.68 | |||
| 3FXR_A_ASCA3001_0 (LYSR TYPE REGULATOROF TSAMBCD) |
1yq9 | PERIPLASMIC [NIFE]HYDROGENASE SMALLSUBUNIT (Desulfovibriogigas) | 5 / 8 | ALA A 142ILE A 143ASN A 144PRO A 176PRO A 168 | None | 1.27A | 3fxrA-1yq9A:undetectable | 3fxrA-1yq9A:22.15 | |||
| 3HVT_A_NVPA557_1 (HIV-1 REVERSETRANSCRIPTASE(SUBUNIT P66)) |
1yq9 | PERIPLASMIC [NIFE]HYDROGENASE SMALLSUBUNIT (Desulfovibriogigas) | 5 / 9 | LEU A 60VAL A 87GLY A 88LEU A 12TYR A 44 | GOL A1272 (-4.0A)NoneGOL A1271 (-3.8A)NoneNone | 1.22A | 3hvtA-1yq9A:undetectable | 3hvtA-1yq9A:19.07 | |||
| 3LP0_A_NVPA701_1 (REVERSETRANSCRIPTASE/RIBONUCLEASE H) |
1yq9 | PERIPLASMIC [NIFE]HYDROGENASE SMALLSUBUNIT (Desulfovibriogigas) | 5 / 9 | LEU A 60VAL A 87GLY A 88LEU A 12TYR A 44 | GOL A1272 (-4.0A)NoneGOL A1271 (-3.8A)NoneNone | 1.20A | 3lp0A-1yq9A:0.0 | 3lp0A-1yq9A:19.44 | |||
| 3LP1_A_NVPA701_1 (REVERSETRANSCRIPTASE/RIBONUCLEASE H) |
1yq9 | PERIPLASMIC [NIFE]HYDROGENASE SMALLSUBUNIT (Desulfovibriogigas) | 5 / 10 | LEU A 60VAL A 87GLY A 88LEU A 12TYR A 44 | GOL A1272 (-4.0A)NoneGOL A1271 (-3.8A)NoneNone | 1.17A | 3lp1A-1yq9A:undetectable | 3lp1A-1yq9A:19.44 | |||
| 3QIP_A_NVPA561_1 (REVERSE HIV-1REVERSETRANSCRIPTASE P66) |
1yq9 | PERIPLASMIC [NIFE]HYDROGENASE SMALLSUBUNIT (Desulfovibriogigas) | 5 / 10 | LEU A 60VAL A 87GLY A 88LEU A 12TYR A 44 | GOL A1272 (-4.0A)NoneGOL A1271 (-3.8A)NoneNone | 1.21A | 3qipA-1yq9A:0.0 | 3qipA-1yq9A:19.44 | |||
| 3TBG_C_RTZC2_1 (CYTOCHROME P450 2D6) |
1yq9 | PERIPLASMIC [NIFE]HYDROGENASE SMALLSUBUNIT (Desulfovibriogigas) | 5 / 10 | THR A 47LEU A 25THR A 27VAL A 32VAL A 9 | None | 1.20A | 3tbgC-1yq9A:undetectable | 3tbgC-1yq9A:21.09 | |||
| 4B3O_A_EFZA1557_1 (REVERSETRANSCRIPTASE/RIBONUCLEASE H) |
1yq9 | PERIPLASMIC [NIFE]HYDROGENASE SMALLSUBUNIT (Desulfovibriogigas) | 5 / 9 | LEU A 60VAL A 87GLY A 88LEU A 12TYR A 44 | GOL A1272 (-4.0A)NoneGOL A1271 (-3.8A)NoneNone | 1.25A | 4b3oA-1yq9A:0.0 | 4b3oA-1yq9A:19.44 | |||
| 5HBM_A_NVPA601_1 (REVERSETRANSCRIPTASE/RIBONUCLEASE H) |
1yq9 | PERIPLASMIC [NIFE]HYDROGENASE SMALLSUBUNIT (Desulfovibriogigas) | 5 / 11 | LEU A 60VAL A 87GLY A 88LEU A 12TYR A 44 | GOL A1272 (-4.0A)NoneGOL A1271 (-3.8A)NoneNone | 1.24A | 5hbmA-1yq9A:undetectable | 5hbmA-1yq9A:18.91 | |||
| 5I8F_A_ML1A211_1 (PHENOLIC OXIDATIVECOUPLING PROTEIN) |
1yq9 | PERIPLASMIC [NIFE]HYDROGENASE SMALLSUBUNIT (Desulfovibriogigas) | 4 / 6 | VAL A 99LYS A 102ALA A 103VAL A 10 | NoneGOL A1273 (-4.1A)NoneNone | 0.84A | 5i8fA-1yq9A:undetectable | 5i8fA-1yq9A:20.51 | |||
| 5IWU_A_ACTA402_0 (MACROLIDE2'-PHOSPHOTRANSFERASE II) |
1yq9 | PERIPLASMIC [NIFE]HYDROGENASE SMALLSUBUNIT (Desulfovibriogigas) | 4 / 6 | PHE A 155VAL A 156MET A 42ILE A 40 | None | 1.13A | 5iwuA-1yq9A:undetectable | 5iwuA-1yq9A:21.54 | |||
| 5JH7_B_6K9B503_0 (TUBULIN BETA-2BCHAIN) |
1yq9 | PERIPLASMIC [NIFE]HYDROGENASE SMALLSUBUNIT (Desulfovibriogigas) | 5 / 11 | VAL A 24SER A 21THR A 18GLU A 73LEU A 35 | NoneNoneNoneSF4 A 267 ( 4.9A)None | 1.26A | 5jh7B-1yq9A:3.2 | 5jh7B-1yq9A:19.52 | |||
| 5JH7_D_6K9D502_0 (TUBULIN BETA-2BCHAIN) |
1yq9 | PERIPLASMIC [NIFE]HYDROGENASE SMALLSUBUNIT (Desulfovibriogigas) | 5 / 11 | VAL A 24SER A 21THR A 18GLU A 73LEU A 35 | NoneNoneNoneSF4 A 267 ( 4.9A)None | 1.27A | 5jh7D-1yq9A:3.2 | 5jh7D-1yq9A:19.52 | |||
| 5OCS_A_ACTA402_0 (PUTATIVENADH-DEPENTDENTFLAVINOXIDOREDUCTASE) |
1yq9 | PERIPLASMIC [NIFE]HYDROGENASE SMALLSUBUNIT (Desulfovibriogigas) | 4 / 5 | CYH A 20ILE A 109HIS A 13HIS A 45 | SF4 A 267 (-2.3A)NoneNoneNone | 1.35A | 5ocsA-1yq9A:undetectable | 5ocsA-1yq9A:22.74 | |||
| 5OCS_A_ACTA402_0 (PUTATIVENADH-DEPENTDENTFLAVINOXIDOREDUCTASE) |
1yq9 | PERIPLASMIC [NIFE]HYDROGENASE SMALLSUBUNIT (Desulfovibriogigas) | 4 / 5 | CYH A 20ILE A 109HIS A 13TYR A 11 | SF4 A 267 (-2.3A)NoneNoneNone | 1.23A | 5ocsA-1yq9A:undetectable | 5ocsA-1yq9A:22.74 | |||
| 5YSI_A_NCAA1001_0 (UBIQUITINATING/DEUBIQUITINATING ENZYMESDEA) |
1yq9 | PERIPLASMIC [NIFE]HYDROGENASE SMALLSUBUNIT (Desulfovibriogigas) | 4 / 6 | ARG A 26SER A 23THR A 27VAL A 32 | None | 1.22A | 5ysiA-1yq9A:undetectable | 5ysiA-1yq9A:19.25 | |||
| 6BSI_A_EFZA601_1 (REVERSETRANSCRIPTASE P66SUBUNIT) |
1yq9 | PERIPLASMIC [NIFE]HYDROGENASE SMALLSUBUNIT (Desulfovibriogigas) | 5 / 10 | LEU A 60VAL A 87GLY A 88LEU A 12TYR A 44 | GOL A1272 (-4.0A)NoneGOL A1271 (-3.8A)NoneNone | 1.27A | 6bsiA-1yq9A:undetectable | 6bsiA-1yq9A:16.33 | |||
| 6BSJ_A_EFZA601_1 (REVERSETRANSCRIPTASE P66SUBUNIT) |
1yq9 | PERIPLASMIC [NIFE]HYDROGENASE SMALLSUBUNIT (Desulfovibriogigas) | 5 / 10 | LEU A 60VAL A 87GLY A 88LEU A 12TYR A 44 | GOL A1272 (-4.0A)NoneGOL A1271 (-3.8A)NoneNone | 1.20A | 6bsjA-1yq9A:undetectable | 6bsjA-1yq9A:16.33 | |||
| 6NJ9_K_SAMK500_0 (HISTONE-LYSINEN-METHYLTRANSFERASE,H3 LYSINE-79SPECIFIC) |
1yq9 | PERIPLASMIC [NIFE]HYDROGENASE SMALLSUBUNIT (Desulfovibriogigas) | 5 / 12 | PRO A 252GLY A 110GLY A 130GLY A 75ALA A 120 | NoneSF4 A 267 ( 3.7A)NoneNoneNone | 1.02A | 6nj9K-1yq9A:undetectable | 6nj9K-1yq9A:19.72 |