SIMILAR PATTERN OF AMINO ACIDS MAPPED TO '2avf'

List of Similar Pattern of Amino Acids

Hit pattern: 3D amino acid arrangements similar to known drug binding site

Query pattern: Residues from known binding site for annotated drug that match the hit pattern


(Click on the DrReposER ID to view details on interfaces and similar patterns of amino acids)
(Click on the view link on the last column to view superposed patterns of amino acids)
Filter list by:
DrReposER ID / Desc. Hit
PDBID
Hit
Macromolecule
Res.
Matches
Interface HETATM RMSD Dali
Z-score
Seq.
Identity (%)
View Dock
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
1OE1_A_CUA501_0
(DISSIMILATORY
COPPER-CONTAINING
NITRITE REDUCTASE)
2avf COPPER-CONTAINING
NITRITE REDUCTASE

(Achromobacter
cycloclastes)
4 / 4 HIS A  95
CYH A 136
HIS A 145
MET A 150
CU  A 501 (-3.2A)
CU  A 501 (-2.3A)
CU  A 501 (-3.2A)
CU  A 501 (-2.3A)
0.24A 1oe1A-2avfA:
50.4
1oe1A-2avfA:
69.60
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
1OE1_A_CUA502_0
(DISSIMILATORY
COPPER-CONTAINING
NITRITE REDUCTASE)
2avf COPPER-CONTAINING
NITRITE REDUCTASE

(Achromobacter
cycloclastes)
3 / 3 ASP A  98
HIS A 100
HIS A 135
CU  A 502 (-4.7A)
CU  A 502 ( 3.2A)
CU  A 502 ( 3.3A)
0.32A 1oe1A-2avfA:
50.4
1oe1A-2avfA:
69.60
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
1OE2_A_CUA501_0
(DISSIMILATORY
COPPER-CONTAINING
NITRITE REDUCTASE)
2avf COPPER-CONTAINING
NITRITE REDUCTASE

(Achromobacter
cycloclastes)
5 / 5 HIS A  95
CYH A 136
PRO A 138
HIS A 145
MET A 150
CU  A 501 (-3.2A)
CU  A 501 (-2.3A)
None
CU  A 501 (-3.2A)
CU  A 501 (-2.3A)
0.40A 1oe2A-2avfA:
50.6
1oe2A-2avfA:
69.30
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
1OE3_A_CUA501_0
(DISSIMILATORY
COPPER-CONTAINING
NITRITE REDUCTASE)
2avf COPPER-CONTAINING
NITRITE REDUCTASE

(Achromobacter
cycloclastes)
4 / 4 HIS A  95
CYH A 136
HIS A 145
MET A 150
CU  A 501 (-3.2A)
CU  A 501 (-2.3A)
CU  A 501 (-3.2A)
CU  A 501 (-2.3A)
0.25A 1oe3A-2avfA:
50.2
1oe3A-2avfA:
69.60
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
1OE3_A_CUA502_0
(DISSIMILATORY
COPPER-CONTAINING
NITRITE REDUCTASE)
2avf COPPER-CONTAINING
NITRITE REDUCTASE

(Achromobacter
cycloclastes)
3 / 3 ASP A  98
HIS A 100
HIS A 135
CU  A 502 (-4.7A)
CU  A 502 ( 3.2A)
CU  A 502 ( 3.3A)
0.33A 1oe3A-2avfA:
50.2
1oe3A-2avfA:
69.60
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1QU3_A_MRCA993_1
(ISOLEUCYL-TRNA
SYNTHETASE)
2avf COPPER-CONTAINING
NITRITE REDUCTASE

(Achromobacter
cycloclastes)
5 / 12 HIS A 100
HIS A 135
ASN A 151
GLN A 247
LYS A 269
CU  A 502 ( 3.2A)
CU  A 502 ( 3.3A)
None
None
None
1.29A 1qu3A-2avfA:
undetectable
1qu3A-2avfA:
15.68
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1QZR_B_CDXB901_1
(DNA TOPOISOMERASE II)
2avf COPPER-CONTAINING
NITRITE REDUCTASE

(Achromobacter
cycloclastes)
4 / 7 THR A 294
TYR A 293
TYR A 301
LEU A 256
None
1.12A 1qzrA-2avfA:
undetectable
1qzrA-2avfA:
21.30
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1QZR_B_CDXB901_2
(DNA TOPOISOMERASE II)
2avf COPPER-CONTAINING
NITRITE REDUCTASE

(Achromobacter
cycloclastes)
4 / 7 THR A 294
TYR A 293
TYR A 301
LEU A 256
None
1.13A 1qzrB-2avfA:
undetectable
1qzrB-2avfA:
21.30
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1RJD_C_SAMC803_1
(CARBOXY METHYL
TRANSFERASE FOR
PROTEIN PHOSPHATASE
2A CATALYTIC SUBUNIT)
2avf COPPER-CONTAINING
NITRITE REDUCTASE

(Achromobacter
cycloclastes)
4 / 6 TYR A 184
ASP A 182
ASN A 249
GLU A 204
None
1.31A 1rjdC-2avfA:
undetectable
1rjdC-2avfA:
21.28
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2FQD_A_CUA601_0
(BLUE COPPER OXIDASE
CUEO)
2avf COPPER-CONTAINING
NITRITE REDUCTASE

(Achromobacter
cycloclastes)
4 / 4 HIS A  95
CYH A 136
HIS A 145
MET A 150
CU  A 501 (-3.2A)
CU  A 501 (-2.3A)
CU  A 501 (-3.2A)
CU  A 501 (-2.3A)
0.69A 2fqdA-2avfA:
20.4
2fqdA-2avfA:
20.40
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2FQE_A_CUA601_0
(BLUE COPPER OXIDASE
CUEO)
2avf COPPER-CONTAINING
NITRITE REDUCTASE

(Achromobacter
cycloclastes)
4 / 4 HIS A  95
CYH A 136
HIS A 145
MET A 150
CU  A 501 (-3.2A)
CU  A 501 (-2.3A)
CU  A 501 (-3.2A)
CU  A 501 (-2.3A)
0.69A 2fqeA-2avfA:
20.5
2fqeA-2avfA:
20.40
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2FQF_A_CUA601_0
(BLUE COPPER OXIDASE
CUEO)
2avf COPPER-CONTAINING
NITRITE REDUCTASE

(Achromobacter
cycloclastes)
4 / 4 HIS A  95
CYH A 136
HIS A 145
MET A 150
CU  A 501 (-3.2A)
CU  A 501 (-2.3A)
CU  A 501 (-3.2A)
CU  A 501 (-2.3A)
0.68A 2fqfA-2avfA:
20.4
2fqfA-2avfA:
20.40
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2FQG_A_CUA601_0
(BLUE COPPER OXIDASE
CUEO)
2avf COPPER-CONTAINING
NITRITE REDUCTASE

(Achromobacter
cycloclastes)
4 / 4 HIS A  95
CYH A 136
HIS A 145
MET A 150
CU  A 501 (-3.2A)
CU  A 501 (-2.3A)
CU  A 501 (-3.2A)
CU  A 501 (-2.3A)
0.68A 2fqgA-2avfA:
20.4
2fqgA-2avfA:
20.40
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2KUH_A_HLTA150_1
(CALMODULIN)
2avf COPPER-CONTAINING
NITRITE REDUCTASE

(Achromobacter
cycloclastes)
4 / 6 LEU A  19
MET A  43
LEU A  83
MET A  73
None
1.17A 2kuhA-2avfA:
undetectable
2kuhA-2avfA:
11.53
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2OCU_A_TYLA3001_1
(LACTOTRANSFERRIN)
2avf COPPER-CONTAINING
NITRITE REDUCTASE

(Achromobacter
cycloclastes)
3 / 3 LEU A 170
TYR A 263
GLY A 261
None
0.59A 2ocuA-2avfA:
undetectable
2ocuA-2avfA:
24.36
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2Q6O_B_SAMB500_0
(HYPOTHETICAL PROTEIN)
2avf COPPER-CONTAINING
NITRITE REDUCTASE

(Achromobacter
cycloclastes)
4 / 6 ASP A  79
VAL A  39
PRO A  36
THR A  34
None
1.21A 2q6oB-2avfA:
undetectable
2q6oB-2avfA:
22.64
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
2XXG_A_CUA1337_0
(DISSIMILATORY
COPPER-CONTAINING
NITRITE REDUCTASE)
2avf COPPER-CONTAINING
NITRITE REDUCTASE

(Achromobacter
cycloclastes)
4 / 4 HIS A  95
CYH A 136
HIS A 145
MET A 150
CU  A 501 (-3.2A)
CU  A 501 (-2.3A)
CU  A 501 (-3.2A)
CU  A 501 (-2.3A)
0.26A 2xxgA-2avfA:
50.4
2xxgA-2avfA:
69.30
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
2XXG_A_CUA1338_0
(DISSIMILATORY
COPPER-CONTAINING
NITRITE REDUCTASE)
2avf COPPER-CONTAINING
NITRITE REDUCTASE

(Achromobacter
cycloclastes)
3 / 3 ASP A  98
HIS A 100
HIS A 135
CU  A 502 (-4.7A)
CU  A 502 ( 3.2A)
CU  A 502 ( 3.3A)
0.30A 2xxgA-2avfA:
50.4
2xxgA-2avfA:
69.30
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
2XXG_C_CUC1338_0
(DISSIMILATORY
COPPER-CONTAINING
NITRITE REDUCTASE)
2avf COPPER-CONTAINING
NITRITE REDUCTASE

(Achromobacter
cycloclastes)
5 / 5 HIS A  95
CYH A 136
PRO A 138
HIS A 145
MET A 150
CU  A 501 (-3.2A)
CU  A 501 (-2.3A)
None
CU  A 501 (-3.2A)
CU  A 501 (-2.3A)
0.37A 2xxgC-2avfA:
50.3
2xxgC-2avfA:
69.30
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
2XXG_C_CUC1339_0
(DISSIMILATORY
COPPER-CONTAINING
NITRITE REDUCTASE)
2avf COPPER-CONTAINING
NITRITE REDUCTASE

(Achromobacter
cycloclastes)
3 / 3 ASP A  98
HIS A 100
HIS A 135
CU  A 502 (-4.7A)
CU  A 502 ( 3.2A)
CU  A 502 ( 3.3A)
0.28A 2xxgC-2avfA:
50.3
2xxgC-2avfA:
69.30
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3APV_B_TP0B190_1
(ALPHA-1-ACID
GLYCOPROTEIN 2)
2avf COPPER-CONTAINING
NITRITE REDUCTASE

(Achromobacter
cycloclastes)
5 / 12 PHE A 320
TYR A 303
LEU A  72
HIS A 245
ALA A 291
None
1.47A 3apvB-2avfA:
undetectable
3apvB-2avfA:
20.91
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3HKU_A_TORA300_2
(CARBONIC ANHYDRASE 2)
2avf COPPER-CONTAINING
NITRITE REDUCTASE

(Achromobacter
cycloclastes)
3 / 3 GLU A 180
HIS A 245
THR A 252
None
0.77A 3hkuA-2avfA:
undetectable
3hkuA-2avfA:
25.30
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3IJD_B_C2FB314_1
(UNCHARACTERIZED
PROTEIN)
2avf COPPER-CONTAINING
NITRITE REDUCTASE

(Achromobacter
cycloclastes)
3 / 3 THR A  90
LYS A  16
GLU A  46
None
0.91A 3ijdB-2avfA:
undetectable
3ijdB-2avfA:
21.07
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4EF3_A_CUA1001_0
(BLUE COPPER OXIDASE
CUEO)
2avf COPPER-CONTAINING
NITRITE REDUCTASE

(Achromobacter
cycloclastes)
4 / 4 HIS A  95
CYH A 136
HIS A 145
MET A 150
CU  A 501 (-3.2A)
CU  A 501 (-2.3A)
CU  A 501 (-3.2A)
CU  A 501 (-2.3A)
0.66A 4ef3A-2avfA:
20.3
4ef3A-2avfA:
20.52
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4HVC_B_HFGB1602_1
(BIFUNCTIONAL
GLUTAMATE/PROLINE--T
RNA LIGASE)
2avf COPPER-CONTAINING
NITRITE REDUCTASE

(Achromobacter
cycloclastes)
4 / 5 HIS A  60
THR A  92
GLU A  47
HIS A 145
None
None
None
CU  A 501 (-3.2A)
1.21A 4hvcB-2avfA:
undetectable
4hvcB-2avfA:
19.85
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4R7I_A_STIA1001_2
(MACROPHAGE
COLONY-STIMULATING
FACTOR 1 RECEPTOR)
2avf COPPER-CONTAINING
NITRITE REDUCTASE

(Achromobacter
cycloclastes)
4 / 5 LEU A 256
VAL A 264
VAL A 244
TYR A 293
None
1.03A 4r7iA-2avfA:
undetectable
4r7iA-2avfA:
22.28
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5XIO_A_HFGA801_1
(PROLINE-TRNA
SYNTHETASE CLASS II
AARS (YBAK RNA
BINDING DOMAIN PLUS
TRNA SYNTHETASE))
2avf COPPER-CONTAINING
NITRITE REDUCTASE

(Achromobacter
cycloclastes)
3 / 3 THR A  92
GLU A  47
HIS A  60
None
0.87A 5xioA-2avfA:
undetectable
5xioA-2avfA:
19.84
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5XIQ_B_HFGB1002_1
(PROLYL-TRNA
SYNTHETASE (PRORS))
2avf COPPER-CONTAINING
NITRITE REDUCTASE

(Achromobacter
cycloclastes)
3 / 3 THR A  92
GLU A  47
HIS A  60
None
0.87A 5xiqB-2avfA:
undetectable
5xiqB-2avfA:
21.47
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5XIQ_D_HFGD1002_1
(PROLYL-TRNA
SYNTHETASE (PRORS))
2avf COPPER-CONTAINING
NITRITE REDUCTASE

(Achromobacter
cycloclastes)
3 / 3 THR A  92
GLU A  47
HIS A  60
None
0.88A 5xiqD-2avfA:
undetectable
5xiqD-2avfA:
21.47
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
6CI6_A_NBOA607_1
(SERUM ALBUMIN)
2avf COPPER-CONTAINING
NITRITE REDUCTASE

(Achromobacter
cycloclastes)
4 / 7 ALA A  61
LYS A  48
GLU A  46
LEU A  93
None
1.06A 6ci6A-2avfA:
undetectable
6ci6A-2avfA:
15.06