SIMILAR PATTERN OF AMINO ACIDS MAPPED TO '2ckb'

List of Similar Pattern of Amino Acids

Hit pattern: 3D amino acid arrangements similar to known drug binding site
Query pattern: Residues from known binding site for annotated drug that match the hit pattern

(Click on the DrReposER ID to view details on interfaces and similar patterns of amino acids)
(Click on the view link on the last column to view superposed patterns of amino acids)
Filter list by:
DrReposER ID / Desc. Hit
PDBID		 Hit
Macromolecule		 Res.
Matches		 Interface HETATM RMSD Dali
Z-score		 Seq.
Identity (%)		 View Dock
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1BDW_B_DVAB8_0
(GRAMICIDIN A)		 2ckb ALPHA, BETA T CELL
RECEPTOR
(Mus
musculus) 		3 / 3 VAL A 114
VAL A 112
TRP A  82
 None
 0.75A 1bdwA-2ckbA:
undetectable
1bdwB-2ckbA:
undetectable		 1bdwA-2ckbA:
6.29
1bdwB-2ckbA:
6.29
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1VIF_A_FOLA1_0
(DIHYDROFOLATE
REDUCTASE)		 2ckb ALPHA, BETA T CELL
RECEPTOR
(Mus
musculus) 		3 / 3 GLN A 119
ILE A 118
TYR A 117
 None
 0.70A 1vifA-2ckbA:
undetectable		 1vifA-2ckbA:
16.06
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3OU7_B_SAMB300_1
(SAM-DEPENDENT
METHYLTRANSFERASE)		 2ckb ALPHA, BETA T CELL
RECEPTOR
(Mus
musculus) 		3 / 3 TYR A 117
ASP A 147
ASP A 145
 None
 0.87A 3ou7B-2ckbA:
undetectable		 3ou7B-2ckbA:
21.01
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5LAK_I_BEZI1_0
(3CL PROTEASE
BEZ-TYR-TYR-ASN-ECC
PEPTIDE INHIBITOR)		 2ckb ALPHA, BETA T CELL
RECEPTOR
(Mus
musculus) 		3 / 3 SER A  51
TYR A  50
TYR A  49
 None
 0.62A 5lakA-2ckbA:
undetectable
5lakI-2ckbA:
undetectable		 5lakA-2ckbA:
20.90
5lakI-2ckbA:
2.23
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5LAK_J_BEZJ1_0
(3CL PROTEASE
BEZ-TYR-TYR-ASN-ECC
PEPTIDE INHIBITOR)		 2ckb ALPHA, BETA T CELL
RECEPTOR
(Mus
musculus) 		3 / 3 SER A  51
TYR A  50
TYR A  49
 None
 0.56A 5lakC-2ckbA:
undetectable
5lakJ-2ckbA:
undetectable		 5lakC-2ckbA:
20.90
5lakJ-2ckbA:
2.23