SIMILAR PATTERN OF AMINO ACIDS MAPPED TO '2d3i'

List of Similar Pattern of Amino Acids

Hit pattern: 3D amino acid arrangements similar to known drug binding site

Query pattern: Residues from known binding site for annotated drug that match the hit pattern


(Click on the DrReposER ID to view details on interfaces and similar patterns of amino acids)
(Click on the view link on the last column to view superposed patterns of amino acids)
Filter list by:
DrReposER ID / Desc. Hit
PDBID
Hit
Macromolecule
Res.
Matches
Interface HETATM RMSD Dali
Z-score
Seq.
Identity (%)
View Dock
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1C4D_A_DVAA6_0
(GRAMICIDIN A)
2d3i OVOTRANSFERRIN
(Gallus
gallus)
3 / 3 ALA A 462
VAL A 465
TRP A 464
BCT  A 690 (-3.2A)
None
None
0.85A 1c4dA-2d3iA:
undetectable
1c4dB-2d3iA:
undetectable
1c4dA-2d3iA:
4.57
1c4dB-2d3iA:
4.57
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1HK1_A_T44A3003_1
(SERUM ALBUMIN)
2d3i OVOTRANSFERRIN
(Gallus
gallus)
4 / 6 HIS A 250
LYS A  75
ALA A 254
VAL A 310
AL  A 687 ( 3.3A)
None
None
None
1.04A 1hk1A-2d3iA:
undetectable
1hk1A-2d3iA:
23.30
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1I9G_A_SAMA301_1
(HYPOTHETICAL PROTEIN
RV2118C)
2d3i OVOTRANSFERRIN
(Gallus
gallus)
3 / 3 GLU A  80
HIS A 250
ASP A 302
None
AL  A 687 ( 3.3A)
None
0.84A 1i9gA-2d3iA:
undetectable
1i9gA-2d3iA:
17.64
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1P93_B_DEXB2999_1
(GLUCOCORTICOID
RECEPTOR)
2d3i OVOTRANSFERRIN
(Gallus
gallus)
5 / 12 MET A 331
GLY A  62
GLN A  63
LEU A 119
ARG A 184
None
1.43A 1p93B-2d3iA:
undetectable
1p93B-2d3iA:
17.78
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1S9Q_B_CHDB500_0
(ESTROGEN-RELATED
RECEPTOR GAMMA)
2d3i OVOTRANSFERRIN
(Gallus
gallus)
4 / 4 LEU A 668
VAL A 664
ILE A 665
TRP A 464
None
1.43A 1s9qB-2d3iA:
0.2
1s9qB-2d3iA:
16.57
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1UWH_B_BAXB1723_2
(B-RAF PROTO-ONCOGENE
SERINE/THREONINE-PRO
TEIN KINASE)
2d3i OVOTRANSFERRIN
(Gallus
gallus)
5 / 6 ILE A 384
VAL A 392
VAL A 589
ILE A 665
ILE A 466
None
1.41A 1uwhB-2d3iA:
undetectable
1uwhB-2d3iA:
16.26
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1Y0X_X_T44X500_1
(THYROID HORMONE
RECEPTOR BETA-1)
2d3i OVOTRANSFERRIN
(Gallus
gallus)
5 / 12 ILE A  77
ALA A 254
ARG A 255
ARG A   8
ILE A  32
None
1.41A 1y0xX-2d3iA:
undetectable
1y0xX-2d3iA:
16.03
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1YAJ_A_BEZA11_0
(CES1 PROTEIN)
2d3i OVOTRANSFERRIN
(Gallus
gallus)
4 / 4 LEU A 267
SER A  58
LEU A  23
LEU A 284
None
1.14A 1yajA-2d3iA:
undetectable
1yajA-2d3iA:
20.37
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2AVD_B_SAMB601_1
(CATECHOL-O-METHYLTRA
NSFERASE)
2d3i OVOTRANSFERRIN
(Gallus
gallus)
3 / 3 SER A 630
GLU A 413
ASP A 395
None
None
AL  A 689 ( 3.0A)
0.87A 2avdB-2d3iA:
undetectable
2avdB-2d3iA:
14.97
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2EJ3_C_GBNC1414_1
(BRANCHED-CHAIN AMINO
ACID
AMINOTRANSFERASE)
2d3i OVOTRANSFERRIN
(Gallus
gallus)
5 / 8 TYR A 431
GLY A 523
GLY A 463
THR A 461
ALA A 462
AL  A 689 ( 4.2A)
None
BCT  A 690 (-3.9A)
BCT  A 690 (-4.3A)
BCT  A 690 (-3.2A)
1.33A 2ej3C-2d3iA:
undetectable
2ej3C-2d3iA:
16.28
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2NV4_A_ACTA148_0
(UPF0066 PROTEIN
AF_0241)
2d3i OVOTRANSFERRIN
(Gallus
gallus)
3 / 3 VAL A 152
GLU A 149
GLU A 167
None
0.78A 2nv4A-2d3iA:
undetectable
2nv4A-2d3iA:
10.63
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2PO5_B_CHDB501_0
(FERROCHELATASE,
MITOCHONDRIAL)
2d3i OVOTRANSFERRIN
(Gallus
gallus)
5 / 11 LEU A 528
LEU A 531
LEU A 569
VAL A 443
VAL A 578
None
1.36A 2po5B-2d3iA:
2.6
2po5B-2d3iA:
20.74
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2QD4_B_CHDB928_0
(FERROCHELATASE)
2d3i OVOTRANSFERRIN
(Gallus
gallus)
5 / 12 LEU A 528
LEU A 531
LEU A 569
VAL A 443
VAL A 578
None
1.39A 2qd4B-2d3iA:
undetectable
2qd4B-2d3iA:
20.79
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2QXS_A_RALA600_1
(ESTROGEN RECEPTOR)
2d3i OVOTRANSFERRIN
(Gallus
gallus)
5 / 12 THR A 372
ALA A 349
GLU A 354
LEU A 636
ILE A 604
None
1.14A 2qxsA-2d3iA:
undetectable
2qxsA-2d3iA:
17.29
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2QXS_B_RALB600_1
(ESTROGEN RECEPTOR)
2d3i OVOTRANSFERRIN
(Gallus
gallus)
5 / 12 THR A 372
ALA A 349
GLU A 354
LEU A 636
ILE A 604
None
1.13A 2qxsB-2d3iA:
undetectable
2qxsB-2d3iA:
17.29
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2R2V_D_ACTD37_0
(GCN4 LEUCINE ZIPPER)
2d3i OVOTRANSFERRIN
(Gallus
gallus)
3 / 3 LYS A 603
ARG A 597
VAL A 596
None
1.11A 2r2vC-2d3iA:
undetectable
2r2vD-2d3iA:
undetectable
2r2vC-2d3iA:
6.76
2r2vD-2d3iA:
6.76
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2YA7_C_ZMRC1776_2
(NEURAMINIDASE A)
2d3i OVOTRANSFERRIN
(Gallus
gallus)
4 / 6 ARG A 614
ASP A 368
ILE A 345
GLN A 346
None
1.42A 2ya7C-2d3iA:
undetectable
2ya7C-2d3iA:
22.41
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2YVL_C_SAMC604_0
(HYPOTHETICAL PROTEIN)
2d3i OVOTRANSFERRIN
(Gallus
gallus)
5 / 12 ILE A 127
GLY A 124
ALA A  94
VAL A 161
ASP A  60
None
BCT  A 688 (-3.8A)
None
None
AL  A 687 ( 2.9A)
0.93A 2yvlC-2d3iA:
undetectable
2yvlC-2d3iA:
17.91
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3ETE_C_H3PC552_1
(GLUTAMATE
DEHYDROGENASE)
2d3i OVOTRANSFERRIN
(Gallus
gallus)
3 / 3 TYR A 324
TYR A  92
GLY A  62
None
AL  A 687 ( 4.1A)
None
0.73A 3eteB-2d3iA:
undetectable
3eteD-2d3iA:
undetectable
3eteF-2d3iA:
undetectable
3eteB-2d3iA:
20.79
3eteD-2d3iA:
20.79
3eteF-2d3iA:
20.79
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3FPJ_A_SAMA301_1
(PUTATIVE
UNCHARACTERIZED
PROTEIN)
2d3i OVOTRANSFERRIN
(Gallus
gallus)
4 / 6 TYR A  92
GLY A  62
GLU A  66
GLU A 149
AL  A 687 ( 4.1A)
None
None
None
1.00A 3fpjA-2d3iA:
undetectable
3fpjA-2d3iA:
18.26
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3KP6_B_SALB3004_1
(TRANSCRIPTIONAL
REGULATOR TCAR)
2d3i OVOTRANSFERRIN
(Gallus
gallus)
4 / 5 ILE A 471
PHE A 484
ASP A 481
GLU A 482
None
1.15A 3kp6A-2d3iA:
0.0
3kp6B-2d3iA:
undetectable
3kp6A-2d3iA:
12.01
3kp6B-2d3iA:
12.01
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3TM4_A_SAMA401_0
(TRNA (GUANINE
N2-)-METHYLTRANSFERA
SE TRM14)
2d3i OVOTRANSFERRIN
(Gallus
gallus)
5 / 12 ALA A 538
HIS A 455
GLY A 526
ALA A 555
LEU A 561
None
1.21A 3tm4A-2d3iA:
2.6
3tm4A-2d3iA:
19.69
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3TM4_B_SAMB401_0
(TRNA (GUANINE
N2-)-METHYLTRANSFERA
SE TRM14)
2d3i OVOTRANSFERRIN
(Gallus
gallus)
5 / 12 ALA A 538
HIS A 455
GLY A 526
ALA A 555
LEU A 561
None
1.22A 3tm4B-2d3iA:
2.5
3tm4B-2d3iA:
19.69
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3WEN_A_ACRA1001_1
(ALPHA-GLUCOSIDASE)
2d3i OVOTRANSFERRIN
(Gallus
gallus)
5 / 12 ALA A  94
ILE A 138
TRP A 125
PHE A 207
HIS A 116
None
1.33A 3wenA-2d3iA:
undetectable
3wenA-2d3iA:
20.17
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4DXU_A_ACAA711_1
(LACTOTRANSFERRIN)
2d3i OVOTRANSFERRIN
(Gallus
gallus)
4 / 6 GLY A 469
VAL A 664
GLY A 397
TYR A 400
None
0.75A 4dxuA-2d3iA:
50.5
4dxuA-2d3iA:
28.17
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4G77_A_TLFA711_0
(LACTOTRANSFERRIN)
2d3i OVOTRANSFERRIN
(Gallus
gallus)
4 / 7 ILE A 127
ALA A 245
TYR A 324
ALA A 327
None
0.43A 4g77A-2d3iA:
51.0
4g77A-2d3iA:
28.59
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4M48_A_21BA704_1
(TRANSPORTER)
2d3i OVOTRANSFERRIN
(Gallus
gallus)
4 / 8 PHE A 155
VAL A 205
ASP A 204
ALA A  96
None
0.91A 4m48A-2d3iA:
undetectable
4m48A-2d3iA:
22.34
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4M5M_A_DX4A401_0
(2-AMINO-4-HYDROXY-6-
HYDROXYMETHYLDIHYDRO
PTERIDINE
PYROPHOSPHOKINASE)
2d3i OVOTRANSFERRIN
(Gallus
gallus)
4 / 8 GLY A 136
LEU A 109
ARG A 135
PHE A 155
None
1.18A 4m5mA-2d3iA:
undetectable
4m5mA-2d3iA:
12.97
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4PCL_A_SAMA301_0
(O-METHYLTRANSFERASE
FAMILY PROTEIN)
2d3i OVOTRANSFERRIN
(Gallus
gallus)
5 / 12 ALA A 245
GLU A  80
ALA A  79
ALA A 248
TYR A 319
None
1.15A 4pclA-2d3iA:
undetectable
4pclA-2d3iA:
14.45
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4YHA_F_MZMF302_1
(ALPHA-CARBONIC
ANHYDRASE)
2d3i OVOTRANSFERRIN
(Gallus
gallus)
5 / 10 ASP A 108
ASN A 107
VAL A 106
LEU A 132
THR A 131
None
1.43A 4yhaF-2d3iA:
undetectable
4yhaF-2d3iA:
14.39
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4ZE1_A_X2NA602_1
(LANOSTEROL 14-ALPHA
DEMETHYLASE)
2d3i OVOTRANSFERRIN
(Gallus
gallus)
5 / 12 GLY A 685
LEU A 307
PHE A 285
GLY A 275
THR A  89
None
1.12A 4ze1A-2d3iA:
undetectable
4ze1A-2d3iA:
20.19
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5A06_D_SORD1341_0
(ALDOSE-ALDOSE
OXIDOREDUCTASE)
2d3i OVOTRANSFERRIN
(Gallus
gallus)
4 / 6 LYS A 624
GLU A 621
GLY A 619
GLY A 616
None
0.98A 5a06D-2d3iA:
undetectable
5a06D-2d3iA:
21.58
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5ESK_A_1YNA701_1
(LANOSTEROL 14-ALPHA
DEMETHYLASE)
2d3i OVOTRANSFERRIN
(Gallus
gallus)
5 / 12 GLY A 685
LEU A 307
PHE A 285
GLY A 275
THR A  89
None
1.14A 5eskA-2d3iA:
undetectable
5eskA-2d3iA:
20.19
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5FSA_A_X2NA590_2
(CYP51 VARIANT1)
2d3i OVOTRANSFERRIN
(Gallus
gallus)
3 / 3 PRO A  76
ILE A 305
SER A 316
None
0.80A 5fsaA-2d3iA:
undetectable
5fsaA-2d3iA:
21.55
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5HFJ_E_SAME301_0
(ADENINE SPECIFIC DNA
METHYLTRANSFERASE
(DPNA))
2d3i OVOTRANSFERRIN
(Gallus
gallus)
5 / 12 ALA A 217
ASP A 292
GLY A 193
SER A 189
TYR A 188
None
1.28A 5hfjE-2d3iA:
undetectable
5hfjE-2d3iA:
17.01
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5IKT_A_TLFA601_1
(PROSTAGLANDIN G/H
SYNTHASE 2)
2d3i OVOTRANSFERRIN
(Gallus
gallus)
3 / 3 LEU A  69
TYR A 325
SER A 316
None
0.86A 5iktA-2d3iA:
undetectable
5iktA-2d3iA:
21.22
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5KBW_B_RBFB201_1
(RIBOFLAVIN
TRANSPORTER RIBU)
2d3i OVOTRANSFERRIN
(Gallus
gallus)
5 / 12 ASP A 572
GLY A 573
ASN A 444
ALA A 437
LYS A 451
None
1.39A 5kbwB-2d3iA:
undetectable
5kbwB-2d3iA:
14.12
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5KVA_A_SAMA301_1
(CAFFEOYL-COA
O-METHYLTRANSFERASE)
2d3i OVOTRANSFERRIN
(Gallus
gallus)
3 / 3 THR A 211
SER A 303
ASP A  60
None
None
AL  A 687 ( 2.9A)
0.79A 5kvaA-2d3iA:
undetectable
5kvaA-2d3iA:
15.60
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5KVA_B_SAMB301_1
(CAFFEOYL-COA
O-METHYLTRANSFERASE)
2d3i OVOTRANSFERRIN
(Gallus
gallus)
3 / 3 THR A 211
SER A 303
ASP A  60
None
None
AL  A 687 ( 2.9A)
0.82A 5kvaB-2d3iA:
undetectable
5kvaB-2d3iA:
15.60
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5UC1_B_486B801_2
(GLUCOCORTICOID
RECEPTOR)
2d3i OVOTRANSFERRIN
(Gallus
gallus)
5 / 12 GLY A  62
GLY A  61
GLN A  63
LEU A 119
ARG A 184
None
1.04A 5uc1B-2d3iA:
undetectable
5uc1B-2d3iA:
7.62
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5VKQ_B_PCFB1804_0
(NO MECHANORECEPTOR
POTENTIAL C ISOFORM
L)
2d3i OVOTRANSFERRIN
(Gallus
gallus)
5 / 8 LEU A 267
LEU A  59
VAL A 252
ILE A   7
LEU A  34
None
1.26A 5vkqB-2d3iA:
undetectable
5vkqC-2d3iA:
undetectable
5vkqB-2d3iA:
16.96
5vkqC-2d3iA:
16.96
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5Z6J_A_FOLA201_1
(DIHYDROFOLATE
REDUCTASE)
2d3i OVOTRANSFERRIN
(Gallus
gallus)
3 / 3 MET A 679
ASP A 315
ARG A 597
None
1.20A 5z6jA-2d3iA:
undetectable
5z6jA-2d3iA:
12.68
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5Z6K_A_FOLA201_1
(DIHYDROFOLATE
REDUCTASE)
2d3i OVOTRANSFERRIN
(Gallus
gallus)
3 / 3 MET A 679
ASP A 315
ARG A 597
None
1.20A 5z6kA-2d3iA:
undetectable
5z6kA-2d3iA:
12.68
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
6AWO_A_SREA701_1
(SODIUM-DEPENDENT
SEROTONIN
TRANSPORTER)
2d3i OVOTRANSFERRIN
(Gallus
gallus)
5 / 9 ASP A 481
ALA A 457
PHE A 484
GLY A 487
GLY A 491
None
1.28A 6awoA-2d3iA:
undetectable
6awoA-2d3iA:
21.16
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
6AWQ_A_SREA701_1
(SODIUM-DEPENDENT
SEROTONIN
TRANSPORTER)
2d3i OVOTRANSFERRIN
(Gallus
gallus)
5 / 9 ASP A 481
ALA A 457
PHE A 484
GLY A 487
GLY A 491
None
1.29A 6awqA-2d3iA:
undetectable
6awqA-2d3iA:
21.16