SIMILAR PATTERN OF AMINO ACIDS MAPPED TO '2d8d'

List of Similar Pattern of Amino Acids

Hit pattern: 3D amino acid arrangements similar to known drug binding site
Query pattern: Residues from known binding site for annotated drug that match the hit pattern

(Click on the DrReposER ID to view details on interfaces and similar patterns of amino acids)
(Click on the view link on the last column to view superposed patterns of amino acids)

Filter list by:

	DrReposER ID / Desc.	Hit PDBID	Hit Macromolecule	Res. Matches	Interface	HETATM	RMSD	Dali Z-score	Seq. Identity (%)
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.	3REM_A_SALA301_1 (SALICYLATE BIOSYNTHESIS PROTEIN PCHB)	2d8d	PHOSPHO-2-DEHYDRO-3- DEOXYHEPTONATE ALDOLASE/CHORISMATE MUTASE (Thermus thermophilus)	4 / 8	ARG A 26 VAL A 30 ARG A 49 MET A 53	None None CL A 91 (-4.0A) CL A 91 ( 4.2A)	0.80A	3remA-2d8dA: 9.1	3remA-2d8dA: 26.47
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.	3REM_B_SALB301_1 (SALICYLATE BIOSYNTHESIS PROTEIN PCHB)	2d8d	PHOSPHO-2-DEHYDRO-3- DEOXYHEPTONATE ALDOLASE/CHORISMATE MUTASE (Thermus thermophilus)	4 / 8	ARG A 26 VAL A 30 ARG A 49 MET A 53	None None CL A 91 (-4.0A) CL A 91 ( 4.2A)	0.84A	3remB-2d8dA: 9.0	3remB-2d8dA: 26.47
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.	4A3U_A_ACTA1358_0 (NADH:FLAVIN OXIDOREDUCTASE/NADH OXIDASE)	2d8d	PHOSPHO-2-DEHYDRO-3- DEOXYHEPTONATE ALDOLASE/CHORISMATE MUTASE (Thermus thermophilus)	5 / 9	ALA A 80 ILE A 77 GLY A 27 VAL A 30 SER A 81	None	1.39A	4a3uA-2d8dA: undetectable	4a3uA-2d8dA: 14.73
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.	4Z3O_F_MFXF101_1 (DNA TOPOISOMERASE 4 SUBUNIT B,PARE30-PARC55 FUSED TOPO IV FROM S. PNEUMONIAE E-SITE DNA)	2d8d	PHOSPHO-2-DEHYDRO-3- DEOXYHEPTONATE ALDOLASE/CHORISMATE MUTASE (Thermus thermophilus)	4 / 5	ARG A 26 ARG A 71 GLU A 68 SER A 81	None	1.22A	4z3oA-2d8dA: undetectable 4z3oB-2d8dA: undetectable	4z3oA-2d8dA: 9.38 4z3oB-2d8dA: 9.38

[["DrReposER ID","Desc.","Hit PDB","Hit molecule","Hit organism","Res. no.","Interface","HETATM","RMSD","Z-score","Seq ID"],["3REM_A_SALA301_1","SALICYLATE BIOSYNTHESIS PROTEIN PCHB","2d8d","PHOSPHO-2-DEHYDRO-3-DEOXYHEPTONATE ALDOLASE\/CHORISMATE MUTASE","Thermus thermophilus",4,"ARG A  26;VAL A  30;ARG A  49;MET A  53","None;None; CL A  91 (-4.0A); CL A  91 ( 4.2A)","0.80A","3remA-2d8dA:9.1","3remA-2d8dA:26.47"],["3REM_B_SALB301_1","SALICYLATE BIOSYNTHESIS PROTEIN PCHB","2d8d","PHOSPHO-2-DEHYDRO-3-DEOXYHEPTONATE ALDOLASE\/CHORISMATE MUTASE","Thermus thermophilus",4,"ARG A  26;VAL A  30;ARG A  49;MET A  53","None;None; CL A  91 (-4.0A); CL A  91 ( 4.2A)","0.84A","3remB-2d8dA:9.0","3remB-2d8dA:26.47"],["4A3U_A_ACTA1358_0","NADH:FLAVIN OXIDOREDUCTASE\/NADH OXIDASE","2d8d","PHOSPHO-2-DEHYDRO-3-DEOXYHEPTONATE ALDOLASE\/CHORISMATE MUTASE","Thermus thermophilus",5,"ALA A  80;ILE A  77;GLY A  27;VAL A  30;SER A  81","None","1.39A","4a3uA-2d8dA:undetectable","4a3uA-2d8dA:14.73"],["4Z3O_F_MFXF101_1","DNA TOPOISOMERASE 4 SUBUNIT B,PARE30-PARC55 FUSED TOPO IV FROM S. PNEUMONIAE;DNA TOPOISOMERASE 4 SUBUNIT B,PARE30-PARC55 FUSED TOPO IV FROM S. PNEUMONIAE;E-SITE DNA","2d8d","PHOSPHO-2-DEHYDRO-3-DEOXYHEPTONATE ALDOLASE\/CHORISMATE MUTASE","Thermus thermophilus",4,"ARG A  26;ARG A  71;GLU A  68;SER A  81","None","1.22A","4z3oA-2d8dA:undetectable;4z3oB-2d8dA:undetectable","4z3oA-2d8dA:9.38;4z3oB-2d8dA:9.38"]]