SIMILAR PATTERN OF AMINO ACIDS MAPPED TO '2gbs'

List of Similar Pattern of Amino Acids

Hit pattern: 3D amino acid arrangements similar to known drug binding site
Query pattern: Residues from known binding site for annotated drug that match the hit pattern

(Click on the DrReposER ID to view details on interfaces and similar patterns of amino acids)
(Click on the view link on the last column to view superposed patterns of amino acids)
Filter list by:
DrReposER ID / Desc. Hit
PDBID		 Hit
Macromolecule		 Res.
Matches		 Interface HETATM RMSD Dali
Z-score		 Seq.
Identity (%)		 View Dock
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4K50_E_ACTE504_0
(RNA POLYMERASE
3D-POL)		 2gbs HYPOTHETICAL PROTEIN
RPA0253
(Rhodopseudomonas
palustris) 		3 / 3 VAL A  19
GLY A  22
LYS A  87
 None
 0.76A 4k50E-2gbsA:
undetectable		 4k50E-2gbsA:
13.91
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5CDN_G_EVPG2101_1
(DNA GYRASE SUBUNIT A
DNA GYRASE SUBUNIT
B,DNA GYRASE SUBUNIT
B)		 2gbs HYPOTHETICAL PROTEIN
RPA0253
(Rhodopseudomonas
palustris) 		4 / 6 SER A   8
GLU A   9
GLY A  25
ASP A  85
 None
 0.79A 5cdnA-2gbsA:
undetectable
5cdnB-2gbsA:
undetectable		 5cdnA-2gbsA:
14.78
5cdnB-2gbsA:
20.21
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5CDN_N_EVPN2101_1
(DNA GYRASE SUBUNIT A
DNA GYRASE SUBUNIT
B,DNA GYRASE SUBUNIT
B)		 2gbs HYPOTHETICAL PROTEIN
RPA0253
(Rhodopseudomonas
palustris) 		4 / 6 SER A   8
GLU A   9
GLY A  25
ASP A  85
 None
 0.79A 5cdnR-2gbsA:
undetectable
5cdnS-2gbsA:
undetectable		 5cdnR-2gbsA:
14.78
5cdnS-2gbsA:
20.21