SIMILAR PATTERN OF AMINO ACIDS MAPPED TO '2hkl'

List of Similar Pattern of Amino Acids

Hit pattern: 3D amino acid arrangements similar to known drug binding site
Query pattern: Residues from known binding site for annotated drug that match the hit pattern

(Click on the DrReposER ID to view details on interfaces and similar patterns of amino acids)
(Click on the view link on the last column to view superposed patterns of amino acids)
Filter list by:
DrReposER ID / Desc. Hit
PDBID		 Hit
Macromolecule		 Res.
Matches		 Interface HETATM RMSD Dali
Z-score		 Seq.
Identity (%)		 View Dock
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3AI8_B_HNQB255_1
(CATHEPSIN B)		 2hkl L,D-TRANSPEPTIDASE
(Enterococcus
faecium) 		4 / 6 GLN A 426
GLY A 438
HIS A 421
TRP A 425
 None
None
SO4  A   1 (-4.1A)
None
 1.48A 3ai8B-2hklA:
undetectable		 3ai8B-2hklA:
20.51
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
6AK3_B_P2EB1201_1
(PROSTAGLANDIN E2
RECEPTOR EP3
SUBTYPE,SOLUBLE
CYTOCHROME B562)		 2hkl L,D-TRANSPEPTIDASE
(Enterococcus
faecium) 		4 / 5 PRO A 378
VAL A 418
GLY A 430
VAL A 347
 None
 0.89A 6ak3B-2hklA:
undetectable		 6ak3B-2hklA:
16.82
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
6CDU_G_EY4G502_0
(CHIMERIC ALPHA1GABAA
RECEPTOR)		 2hkl L,D-TRANSPEPTIDASE
(Enterococcus
faecium) 		4 / 8 PRO A 378
ILE A 345
THR A 461
TYR A 383
 None
 1.06A 6cduG-2hklA:
undetectable
6cduH-2hklA:
undetectable		 6cduG-2hklA:
21.82
6cduH-2hklA:
21.82
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
6MN5_A_LLLA301_0
(AMINOGLYCOSIDE
N(3)-ACETYLTRANSFERA
SE, AAC(3)-IVA)		 2hkl L,D-TRANSPEPTIDASE
(Enterococcus
faecium) 		4 / 6 TYR A 357
GLU A 346
ASP A 348
GLU A 350
 None
 1.50A 6mn5A-2hklA:
undetectable		 6mn5A-2hklA:
18.39
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
6MN5_C_LLLC301_0
(AMINOGLYCOSIDE
N(3)-ACETYLTRANSFERA
SE, AAC(3)-IVA)		 2hkl L,D-TRANSPEPTIDASE
(Enterococcus
faecium) 		4 / 6 TYR A 357
GLU A 346
ASP A 348
GLU A 350
 None
 1.22A 6mn5C-2hklA:
undetectable		 6mn5C-2hklA:
18.39