SIMILAR PATTERN OF AMINO ACIDS MAPPED TO '2jpd'

List of Similar Pattern of Amino Acids

Hit pattern: 3D amino acid arrangements similar to known drug binding site

Query pattern: Residues from known binding site for annotated drug that match the hit pattern


(Click on the DrReposER ID to view details on interfaces and similar patterns of amino acids)
(Click on the view link on the last column to view superposed patterns of amino acids)
Filter list by:
DrReposER ID / Desc. Hit
PDBID
Hit
Macromolecule
Res.
Matches
Interface HETATM RMSD Dali
Z-score
Seq.
Identity (%)
View Dock
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3OU6_A_SAMA300_0
(SAM-DEPENDENT
METHYLTRANSFERASE)
2jpd DNA EXCISION REPAIR
PROTEIN ERCC-1

(Homo
sapiens)
5 / 12 LEU A 209
TYR A 212
GLY A 133
LEU A 139
ALA A 165
None
1.14A 3ou6A-2jpdA:
undetectable
3ou6A-2jpdA:
21.76
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3OU6_B_SAMB300_0
(SAM-DEPENDENT
METHYLTRANSFERASE)
2jpd DNA EXCISION REPAIR
PROTEIN ERCC-1

(Homo
sapiens)
5 / 12 LEU A 209
TYR A 212
GLY A 133
LEU A 139
ALA A 165
None
1.08A 3ou6B-2jpdA:
undetectable
3ou6B-2jpdA:
21.76
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3W9T_B_W9TB513_1
(HEMOLYTIC LECTIN
CEL-III)
2jpd DNA EXCISION REPAIR
PROTEIN ERCC-1

(Homo
sapiens)
4 / 6 CYH A 194
THR A 195
CYH A 189
ILE A 153
None
1.49A 3w9tB-2jpdA:
undetectable
3w9tB-2jpdA:
15.12
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5IKR_A_ID8A601_1
(PROSTAGLANDIN G/H
SYNTHASE 2)
2jpd DNA EXCISION REPAIR
PROTEIN ERCC-1

(Homo
sapiens)
5 / 12 VAL A 171
LEU A 141
SER A 142
ALA A 181
LEU A 182
None
1.00A 5ikrA-2jpdA:
undetectable
5ikrA-2jpdA:
13.57
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5JVZ_B_FLPB601_1
(PROSTAGLANDIN G/H
SYNTHASE 2)
2jpd DNA EXCISION REPAIR
PROTEIN ERCC-1

(Homo
sapiens)
5 / 12 VAL A 171
LEU A 141
SER A 142
ALA A 181
LEU A 182
None
1.09A 5jvzB-2jpdA:
undetectable
5jvzB-2jpdA:
13.04