SIMILAR PATTERN OF AMINO ACIDS MAPPED TO '2kbn'

List of Similar Pattern of Amino Acids

Hit pattern: 3D amino acid arrangements similar to known drug binding site
Query pattern: Residues from known binding site for annotated drug that match the hit pattern

(Click on the DrReposER ID to view details on interfaces and similar patterns of amino acids)
(Click on the view link on the last column to view superposed patterns of amino acids)
Filter list by:
DrReposER ID / Desc. Hit
PDBID		 Hit
Macromolecule		 Res.
Matches		 Interface HETATM RMSD Dali
Z-score		 Seq.
Identity (%)		 View Dock
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1GMK_C_DVAC8_0
(GRAMICIDIN A)		 2kbn CONSERVED PROTEIN
(Methanosarcina
mazei) 		3 / 4 VAL A  72
TRP A  53
TRP A  17
 None
 1.42A 1gmkC-2kbnA:
undetectable
1gmkD-2kbnA:
undetectable		 1gmkC-2kbnA:
18.52
1gmkD-2kbnA:
18.52
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2QD5_A_CHDA702_0
(FERROCHELATASE)		 2kbn CONSERVED PROTEIN
(Methanosarcina
mazei) 		3 / 3 LEU A  58
PRO A  59
ARG A  70
 None
 0.42A 2qd5A-2kbnA:
undetectable		 2qd5A-2kbnA:
15.28
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4KLR_B_CHDB504_0
(FERROCHELATASE,
MITOCHONDRIAL)		 2kbn CONSERVED PROTEIN
(Methanosarcina
mazei) 		3 / 3 LEU A  58
PRO A  59
ARG A  70
 None
 0.67A 4klrB-2kbnA:
undetectable		 4klrB-2kbnA:
14.32
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
6CDU_G_EY4G501_0
(CHIMERIC ALPHA1GABAA
RECEPTOR)		 2kbn CONSERVED PROTEIN
(Methanosarcina
mazei) 		4 / 7 GLN A  84
VAL A  83
ILE A  11
THR A   6
 None
 1.00A 6cduF-2kbnA:
undetectable
6cduG-2kbnA:
undetectable		 6cduF-2kbnA:
17.34
6cduG-2kbnA:
17.34