SIMILAR PATTERN OF AMINO ACIDS MAPPED TO '2knb'

List of Similar Pattern of Amino Acids

Hit pattern: 3D amino acid arrangements similar to known drug binding site
Query pattern: Residues from known binding site for annotated drug that match the hit pattern

(Click on the DrReposER ID to view details on interfaces and similar patterns of amino acids)
(Click on the view link on the last column to view superposed patterns of amino acids)
Filter list by:
DrReposER ID / Desc. Hit
PDBID		 Hit
Macromolecule		 Res.
Matches		 Interface HETATM RMSD Dali
Z-score		 Seq.
Identity (%)		 View Dock
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1IWI_A_CAMA418_0
(CYTOCHROME P450-CAM)		 2knb E3 UBIQUITIN-PROTEIN
LIGASE PARKIN
(Rattus
norvegicus) 		4 / 8 THR A  21
VAL A  29
VAL A  67
VAL A   5
 None
 0.86A 1iwiA-2knbA:
undetectable		 1iwiA-2knbA:
11.86
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1T86_A_CAMA1422_0
(CYTOCHROME P450-CAM)		 2knb E3 UBIQUITIN-PROTEIN
LIGASE PARKIN
(Rattus
norvegicus) 		4 / 8 THR A  21
VAL A  29
VAL A  67
VAL A   5
 None
 0.88A 1t86A-2knbA:
undetectable		 1t86A-2knbA:
11.65
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2Z97_A_CAMA422_0
(CYTOCHROME P450-CAM)		 2knb E3 UBIQUITIN-PROTEIN
LIGASE PARKIN
(Rattus
norvegicus) 		4 / 6 THR A  21
VAL A  29
VAL A  67
VAL A   5
 None
 0.91A 2z97A-2knbA:
undetectable		 2z97A-2knbA:
11.86
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2ZUJ_A_CAMA422_0
(CAMPHOR
5-MONOOXYGENASE)		 2knb E3 UBIQUITIN-PROTEIN
LIGASE PARKIN
(Rattus
norvegicus) 		4 / 8 THR A  21
VAL A  29
VAL A  67
VAL A   5
 None
 0.88A 2zujA-2knbA:
undetectable		 2zujA-2knbA:
12.35
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4GC9_A_SAMA401_0
(DIMETHYLADENOSINE
TRANSFERASE 1,
MITOCHONDRIAL)		 2knb E3 UBIQUITIN-PROTEIN
LIGASE PARKIN
(Rattus
norvegicus) 		5 / 12 GLN A  25
LEU A  54
VAL A  15
LEU A  26
VAL A  29
 None
 0.98A 4gc9A-2knbA:
undetectable		 4gc9A-2knbA:
15.74
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4L4B_A_CAMA502_0
(CAMPHOR
5-MONOOXYGENASE)		 2knb E3 UBIQUITIN-PROTEIN
LIGASE PARKIN
(Rattus
norvegicus) 		4 / 8 THR A  21
VAL A  29
VAL A  67
VAL A   5
 None
 0.84A 4l4bA-2knbA:
undetectable		 4l4bA-2knbA:
11.62