SIMILAR PATTERN OF AMINO ACIDS MAPPED TO '2ksn'

List of Similar Pattern of Amino Acids

Hit pattern: 3D amino acid arrangements similar to known drug binding site
Query pattern: Residues from known binding site for annotated drug that match the hit pattern

(Click on the DrReposER ID to view details on interfaces and similar patterns of amino acids)
(Click on the view link on the last column to view superposed patterns of amino acids)
Filter list by:
DrReposER ID / Desc. Hit
PDBID		 Hit
Macromolecule		 Res.
Matches		 Interface HETATM RMSD Dali
Z-score		 Seq.
Identity (%)		 View Dock
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1G5Y_C_9CRC502_1
(RETINOIC ACID
RECEPTOR RXR-ALPHA)		 2ksn UBIQUITIN
DOMAIN-CONTAINING
PROTEIN 2
(Homo
sapiens) 		5 / 10 ALA A  77
LEU A 118
LEU A 100
ALA A 104
ILE A  93
 None
 1.22A 1g5yC-2ksnA:
undetectable		 1g5yC-2ksnA:
20.83
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1GAH_A_ACRA497_2
(GLUCOAMYLASE-471)		 2ksn UBIQUITIN
DOMAIN-CONTAINING
PROTEIN 2
(Homo
sapiens) 		4 / 6 ALA A 104
SER A  41
ARG A 115
LEU A 100
 None
 1.17A 1gahA-2ksnA:
undetectable		 1gahA-2ksnA:
13.38