SIMILAR PATTERN OF AMINO ACIDS MAPPED TO '2kwb'

List of Similar Pattern of Amino Acids

Hit pattern: 3D amino acid arrangements similar to known drug binding site
Query pattern: Residues from known binding site for annotated drug that match the hit pattern

(Click on the DrReposER ID to view details on interfaces and similar patterns of amino acids)
(Click on the view link on the last column to view superposed patterns of amino acids)
Filter list by:
DrReposER ID / Desc. Hit
PDBID		 Hit
Macromolecule		 Res.
Matches		 Interface HETATM RMSD Dali
Z-score		 Seq.
Identity (%)		 View Dock
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1KQE_A_DVAA6_0
(MINI-GRAMICIDIN A)		 2kwb TRANSLATIONALLY-CONT
ROLLED TUMOR PROTEIN
HOMOLOG
(Caenorhabditis
elegans) 		3 / 3 ALA A 129
VAL A 124
TRP A 123
 None
 0.86A 1kqeA-2kwbA:
undetectable
1kqeE-2kwbA:
undetectable		 1kqeA-2kwbA:
6.67
1kqeE-2kwbA:
6.67
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1KQE_B_DVAB6_0
(MINI-GRAMICIDIN A)		 2kwb TRANSLATIONALLY-CONT
ROLLED TUMOR PROTEIN
HOMOLOG
(Caenorhabditis
elegans) 		3 / 3 ALA A 129
VAL A 124
TRP A 123
 None
 0.84A 1kqeB-2kwbA:
undetectable
1kqeD-2kwbA:
undetectable		 1kqeB-2kwbA:
6.67
1kqeD-2kwbA:
6.67
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1KQE_D_DVAD6_0
(MINI-GRAMICIDIN A)		 2kwb TRANSLATIONALLY-CONT
ROLLED TUMOR PROTEIN
HOMOLOG
(Caenorhabditis
elegans) 		3 / 3 TRP A 123
ALA A 129
VAL A 124
 None
 0.85A 1kqeB-2kwbA:
undetectable
1kqeD-2kwbA:
undetectable		 1kqeB-2kwbA:
6.67
1kqeD-2kwbA:
6.67
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1KQE_E_DVAE6_0
(MINI-GRAMICIDIN A)		 2kwb TRANSLATIONALLY-CONT
ROLLED TUMOR PROTEIN
HOMOLOG
(Caenorhabditis
elegans) 		3 / 3 TRP A 123
ALA A 129
VAL A 124
 None
 0.84A 1kqeA-2kwbA:
undetectable
1kqeE-2kwbA:
undetectable		 1kqeA-2kwbA:
6.67
1kqeE-2kwbA:
6.67
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5YCP_A_BRLA501_0
(PEROXISOME
PROLIFERATOR-ACTIVAT
ED RECEPTOR GAMMA)		 2kwb TRANSLATIONALLY-CONT
ROLLED TUMOR PROTEIN
HOMOLOG
(Caenorhabditis
elegans) 		5 / 12 LEU A   2
ILE A 177
HIS A  74
LEU A  76
LEU A 169
 None
 1.23A 5ycpA-2kwbA:
undetectable		 5ycpA-2kwbA:
18.52