SIMILAR PATTERN OF AMINO ACIDS MAPPED TO '2kym'

List of Similar Pattern of Amino Acids

Hit pattern: 3D amino acid arrangements similar to known drug binding site
Query pattern: Residues from known binding site for annotated drug that match the hit pattern

(Click on the DrReposER ID to view details on interfaces and similar patterns of amino acids)
(Click on the view link on the last column to view superposed patterns of amino acids)
Filter list by:
DrReposER ID / Desc. Hit
PDBID		 Hit
Macromolecule		 Res.
Matches		 Interface HETATM RMSD Dali
Z-score		 Seq.
Identity (%)		 View Dock
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1Y0X_X_T44X500_2
(THYROID HORMONE
RECEPTOR BETA-1)		 2kym BUD EMERGENCE
PROTEIN 1
(Lodderomyces
elongisporus) 		4 / 5 ILE A  42
SER A  21
LEU A  26
ASN A  25
 None
 1.07A 1y0xX-2kymA:
undetectable		 1y0xX-2kymA:
15.44
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5M54_E_TA1E502_1
(TUBULIN BETA-2B
CHAIN)		 2kym BUD EMERGENCE
PROTEIN 1
(Lodderomyces
elongisporus) 		5 / 12 VAL A  20
ASP A  19
ALA A  39
ARG A  43
GLY A  45
 None
 1.17A 5m54E-2kymA:
undetectable		 5m54E-2kymA:
13.38
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5NKN_A_LOCA201_2
(NEUTROPHIL
GELATINASE-ASSOCIATE
D LIPOCALIN)		 2kym BUD EMERGENCE
PROTEIN 1
(Lodderomyces
elongisporus) 		3 / 3 VAL A  77
LYS A  85
MET A  -2
 None
 1.00A 5nknA-2kymA:
undetectable		 5nknA-2kymA:
18.70