SIMILAR PATTERN OF AMINO ACIDS MAPPED TO '2l80'

List of Similar Pattern of Amino Acids

Hit pattern: 3D amino acid arrangements similar to known drug binding site

Query pattern: Residues from known binding site for annotated drug that match the hit pattern


(Click on the DrReposER ID to view details on interfaces and similar patterns of amino acids)
(Click on the view link on the last column to view superposed patterns of amino acids)
Filter list by:
DrReposER ID / Desc. Hit
PDBID
Hit
Macromolecule
Res.
Matches
Interface HETATM RMSD Dali
Z-score
Seq.
Identity (%)
View Dock
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1EKJ_E_ACTE3005_0
(BETA-CARBONIC
ANHYDRASE)
2l80 UBIQUITIN
CARBOXYL-TERMINAL
HYDROLASE 13

(Homo
sapiens)
4 / 7 CYH A  24
HIS A  57
GLY A  54
GLY A  53
ZN  A 124 (-2.2A)
ZN  A 124 (-3.1A)
ZN  A 124 ( 4.1A)
None
0.94A 1ekjE-2l80A:
undetectable
1ekjF-2l80A:
undetectable
1ekjE-2l80A:
20.00
1ekjF-2l80A:
20.00
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4K50_A_ACTA505_0
(RNA POLYMERASE
3D-POL)
2l80 UBIQUITIN
CARBOXYL-TERMINAL
HYDROLASE 13

(Homo
sapiens)
3 / 3 CYH A  44
ASN A  55
LYS A  46
ZN  A 124 (-2.2A)
None
None
1.20A 4k50A-2l80A:
undetectable
4k50A-2l80A:
14.91
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4X1K_D_LOCD502_1
(TUBULIN ALPHA CHAIN
TUBULIN BETA CHAIN)
2l80 UBIQUITIN
CARBOXYL-TERMINAL
HYDROLASE 13

(Homo
sapiens)
4 / 4 ASN A  36
SER A  85
ALA A  70
VAL A  71
None
1.01A 4x1kC-2l80A:
undetectable
4x1kC-2l80A:
13.01
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5NM5_B_LOCB502_1
(TUBULIN ALPHA-1B
CHAIN
TUBULIN BETA-2B
CHAIN)
2l80 UBIQUITIN
CARBOXYL-TERMINAL
HYDROLASE 13

(Homo
sapiens)
4 / 4 ASN A  36
SER A  85
ALA A  70
VAL A  71
None
1.06A 5nm5A-2l80A:
undetectable
5nm5A-2l80A:
13.01