SIMILAR PATTERN OF AMINO ACIDS MAPPED TO '2lts'

List of Similar Pattern of Amino Acids

Hit pattern: 3D amino acid arrangements similar to known drug binding site
Query pattern: Residues from known binding site for annotated drug that match the hit pattern

(Click on the DrReposER ID to view details on interfaces and similar patterns of amino acids)
(Click on the view link on the last column to view superposed patterns of amino acids)
Filter list by:
DrReposER ID / Desc. Hit
PDBID		 Hit
Macromolecule		 Res.
Matches		 Interface HETATM RMSD Dali
Z-score		 Seq.
Identity (%)		 View Dock
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1WMQ_A_HISA2001_0
(HUT OPERON POSITIVE
REGULATORY PROTEIN)		 2lts PROTEIN RDE-4
(Caenorhabditis
elegans) 		4 / 6 ARG A 211
ILE A 213
GLY A 212
ALA A 224
 None
 0.98A 1wmqA-2ltsA:
undetectable		 1wmqA-2ltsA:
20.00
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1WMQ_B_HISB1001_0
(HUT OPERON POSITIVE
REGULATORY PROTEIN)		 2lts PROTEIN RDE-4
(Caenorhabditis
elegans) 		4 / 6 ARG A 211
ILE A 213
GLY A 212
ALA A 224
 None
 0.98A 1wmqB-2ltsA:
undetectable		 1wmqB-2ltsA:
20.00
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1WPU_A_HISA2001_0
(HUT OPERON POSITIVE
REGULATORY PROTEIN)		 2lts PROTEIN RDE-4
(Caenorhabditis
elegans) 		4 / 6 ARG A 211
ILE A 213
GLY A 212
ALA A 224
 None
 0.95A 1wpuA-2ltsA:
undetectable		 1wpuA-2ltsA:
20.00
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1WPU_B_HISB1001_0
(HUT OPERON POSITIVE
REGULATORY PROTEIN)		 2lts PROTEIN RDE-4
(Caenorhabditis
elegans) 		4 / 6 ARG A 211
ILE A 213
GLY A 212
ALA A 224
 None
 0.96A 1wpuB-2ltsA:
undetectable		 1wpuB-2ltsA:
20.00
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1WRQ_A_HISA2001_0
(HUT OPERON POSITIVE
REGULATORY PROTEIN)		 2lts PROTEIN RDE-4
(Caenorhabditis
elegans) 		4 / 6 ARG A 211
ILE A 213
GLY A 212
ALA A 224
 None
 1.00A 1wrqA-2ltsA:
undetectable		 1wrqA-2ltsA:
20.00
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1WRQ_B_HISB1001_0
(HUT OPERON POSITIVE
REGULATORY PROTEIN)		 2lts PROTEIN RDE-4
(Caenorhabditis
elegans) 		4 / 6 ARG A 211
ILE A 213
GLY A 212
ALA A 224
 None
 1.01A 1wrqB-2ltsA:
undetectable		 1wrqB-2ltsA:
20.00
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3TX2_A_BEZA251_0
(PROBABLE
6-PHOSPHOGLUCONOLACT
ONASE)		 2lts PROTEIN RDE-4
(Caenorhabditis
elegans) 		4 / 7 LYS A 173
ALA A 225
TRP A 170
TRP A 226
 None
 1.26A 3tx2A-2ltsA:
undetectable		 3tx2A-2ltsA:
19.70