SIMILAR PATTERN OF AMINO ACIDS MAPPED TO '2mk5'

List of Similar Pattern of Amino Acids

Hit pattern: 3D amino acid arrangements similar to known drug binding site
Query pattern: Residues from known binding site for annotated drug that match the hit pattern

(Click on the DrReposER ID to view details on interfaces and similar patterns of amino acids)
(Click on the view link on the last column to view superposed patterns of amino acids)
Filter list by:
DrReposER ID / Desc. Hit
PDBID		 Hit
Macromolecule		 Res.
Matches		 Interface HETATM RMSD Dali
Z-score		 Seq.
Identity (%)		 View Dock
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1BDW_B_DVAB6_0
(GRAMICIDIN A)		 2mk5 ENDOLYSIN
(Staphylococcus
virus
G15) 		3 / 3 TRP A  45
ALA A  92
VAL A 117
 None
 0.86A 1bdwA-2mk5A:
undetectable
1bdwB-2mk5A:
undetectable		 1bdwA-2mk5A:
5.47
1bdwB-2mk5A:
5.47
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3SO9_A_017A100_1
(HIV-1 PROTEASE)		 2mk5 ENDOLYSIN
(Staphylococcus
virus
G15) 		5 / 8 ASN A 105
GLY A 104
ALA A 101
GLY A  98
THR A  62
 None
 1.46A 3so9A-2mk5A:
undetectable		 3so9A-2mk5A:
21.58
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3TGV_B_BEZB1_0
(HEME-BINDING PROTEIN
HUTZ)		 2mk5 ENDOLYSIN
(Staphylococcus
virus
G15) 		4 / 6 GLN A  41
TYR A  42
PHE A  68
PRO A  67
 None
 1.29A 3tgvB-2mk5A:
undetectable		 3tgvB-2mk5A:
18.92
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3TGV_D_BEZD1_0
(HEME-BINDING PROTEIN
HUTZ)		 2mk5 ENDOLYSIN
(Staphylococcus
virus
G15) 		4 / 6 GLN A  41
TYR A  42
PHE A  68
PRO A  67
 None
 1.29A 3tgvD-2mk5A:
undetectable		 3tgvD-2mk5A:
18.92