SIMILAR PATTERN OF AMINO ACIDS MAPPED TO '2n76'

List of Similar Pattern of Amino Acids

Hit pattern: 3D amino acid arrangements similar to known drug binding site
Query pattern: Residues from known binding site for annotated drug that match the hit pattern

(Click on the DrReposER ID to view details on interfaces and similar patterns of amino acids)
(Click on the view link on the last column to view superposed patterns of amino acids)

Filter list by:

	DrReposER ID / Desc.	Hit PDBID	Hit Macromolecule	Res. Matches	Interface	HETATM	RMSD	Dali Z-score	Seq. Identity (%)	View	Dock
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.	1D4Y_A_TPVA501_2 (PROTEIN (HIV-1 PROTEASE))	2n76	DE NOVO DESIGNED PROTEIN LFR1 (synthetic construct)	5 / 8	LEU A 55 ALA A 18 GLY A 51 VAL A 8 ILE A 10	None	1.48A	1d4yB-2n76A: undetectable	1d4yB-2n76A: 21.43
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.	2HYY_A_STIA600_2 (PROTO-ONCOGENE TYROSINE-PROTEIN KINASE ABL1)	2n76	DE NOVO DESIGNED PROTEIN LFR1 (synthetic construct)	4 / 6	LEU A 82 VAL A 59 VAL A 8 ILE A 26	None	0.91A	2hyyA-2n76A: undetectable	2hyyA-2n76A: 17.67
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.	5KB6_A_ADNA401_1 (ADENOSINE KINASE)	2n76	DE NOVO DESIGNED PROTEIN LFR1 (synthetic construct)	6 / 12	THR A 97 VAL A 6 ILE A 42 ALA A 61 ALA A 67 ILE A 70	None	1.46A	5kb6A-2n76A: undetectable	5kb6A-2n76A: 16.62
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.	5ONL_A_010A302_0 (YNDL)	2n76	DE NOVO DESIGNED PROTEIN LFR1 (synthetic construct)	4 / 5	GLU A 76 LYS A 72 GLU A 75 GLU A 79	None	0.84A	5onlA-2n76A: 0.3	5onlA-2n76A: 23.70
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.	6HRJ_A_010A302_0 (YNDL)	2n76	DE NOVO DESIGNED PROTEIN LFR1 (synthetic construct)	4 / 5	GLU A 76 LYS A 72 GLU A 75 GLU A 79	None	0.85A	6hrjA-2n76A: 0.4	6hrjA-2n76A: 22.52

[["DrReposER ID","Desc.","Hit PDB","Hit molecule","Hit organism","Res. no.","Interface","HETATM","RMSD","Z-score","Seq ID"],["1D4Y_A_TPVA501_2","PROTEIN (HIV-1 PROTEASE);PROTEIN (HIV-1 PROTEASE)","2n76","DE NOVO DESIGNED PROTEIN LFR1","synthetic construct",5,"LEU A  55;ALA A  18;GLY A  51;VAL A   8;ILE A  10","None","1.48A","1d4yB-2n76A:undetectable","1d4yB-2n76A:21.43"],["2HYY_A_STIA600_2","PROTO-ONCOGENE TYROSINE-PROTEIN KINASE ABL1","2n76","DE NOVO DESIGNED PROTEIN LFR1","synthetic construct",4,"LEU A  82;VAL A  59;VAL A   8;ILE A  26","None","0.91A","2hyyA-2n76A:undetectable","2hyyA-2n76A:17.67"],["5KB6_A_ADNA401_1","ADENOSINE KINASE","2n76","DE NOVO DESIGNED PROTEIN LFR1","synthetic construct",6,"THR A  97;VAL A   6;ILE A  42;ALA A  61;ALA A  67;ILE A  70","None","1.46A","5kb6A-2n76A:undetectable","5kb6A-2n76A:16.62"],["5ONL_A_010A302_0","YNDL","2n76","DE NOVO DESIGNED PROTEIN LFR1","synthetic construct",4,"GLU A  76;LYS A  72;GLU A  75;GLU A  79","None","0.84A","5onlA-2n76A:0.3","5onlA-2n76A:23.70"],["6HRJ_A_010A302_0","YNDL","2n76","DE NOVO DESIGNED PROTEIN LFR1","synthetic construct",4,"GLU A  76;LYS A  72;GLU A  75;GLU A  79","None","0.85A","6hrjA-2n76A:0.4","6hrjA-2n76A:22.52"]]