SIMILAR PATTERN OF AMINO ACIDS MAPPED TO '2nlw'

List of Similar Pattern of Amino Acids

Hit pattern: 3D amino acid arrangements similar to known drug binding site

Query pattern: Residues from known binding site for annotated drug that match the hit pattern


(Click on the DrReposER ID to view details on interfaces and similar patterns of amino acids)
(Click on the view link on the last column to view superposed patterns of amino acids)
Filter list by:
DrReposER ID / Desc. Hit
PDBID
Hit
Macromolecule
Res.
Matches
Interface HETATM RMSD Dali
Z-score
Seq.
Identity (%)
View Dock
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2EIN_J_CHDJ60_0
(CYTOCHROME C OXIDASE
POLYPEPTIDE
VIIA-HEART
CYTOCHROME C OXIDASE
SUBUNIT 1)
2nlw EUKARYOTIC
TRANSLATION
INITIATION FACTOR 3
SUBUNIT 9

(Homo
sapiens)
4 / 8 ILE A  38
PHE A  42
THR A  91
LEU A  86
None
0.88A 2einA-2nlwA:
undetectable
2einJ-2nlwA:
undetectable
2einA-2nlwA:
12.55
2einJ-2nlwA:
20.00
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3ABK_J_CHDJ60_0
(CYTOCHROME C OXIDASE
POLYPEPTIDE 7A1
CYTOCHROME C OXIDASE
SUBUNIT 1)
2nlw EUKARYOTIC
TRANSLATION
INITIATION FACTOR 3
SUBUNIT 9

(Homo
sapiens)
4 / 8 ILE A  38
PHE A  42
THR A  91
LEU A  86
None
0.94A 3abkA-2nlwA:
undetectable
3abkJ-2nlwA:
undetectable
3abkA-2nlwA:
12.55
3abkJ-2nlwA:
20.00