SIMILAR PATTERN OF AMINO ACIDS MAPPED TO '2nm1'

List of Similar Pattern of Amino Acids

Hit pattern: 3D amino acid arrangements similar to known drug binding site
Query pattern: Residues from known binding site for annotated drug that match the hit pattern

(Click on the DrReposER ID to view details on interfaces and similar patterns of amino acids)
(Click on the view link on the last column to view superposed patterns of amino acids)
Filter list by:
DrReposER ID / Desc. Hit
PDBID		 Hit
Macromolecule		 Res.
Matches		 Interface HETATM RMSD Dali
Z-score		 Seq.
Identity (%)		 View Dock
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1HSH_C_MK1C402_1
(HIV-II PROTEASE)		 2nm1 BOTULINUM NEUROTOXIN
TYPE B
(Clostridium
botulinum) 		5 / 12 ARG A 869
ASP A 877
GLY A 882
ALA A 883
ILE A1040
 None
 0.94A 1hshC-2nm1A:
undetectable		 1hshC-2nm1A:
12.16
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
1I1E_A_DM2A3001_1
(BOTULINUM NEUROTOXIN
TYPE B)		 2nm1 BOTULINUM NEUROTOXIN
TYPE B
(Clostridium
botulinum) 		6 / 9 GLU A1189
GLU A1190
GLY A1239
SER A1260
TRP A1262
TYR A1263
 None
 0.79A 1i1eA-2nm1A:
37.5		 1i1eA-2nm1A:
100.00
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
1I1E_A_DM2A3001_1
(BOTULINUM NEUROTOXIN
TYPE B)		 2nm1 BOTULINUM NEUROTOXIN
TYPE B
(Clostridium
botulinum) 		5 / 9 GLU A1190
GLY A1239
HIS A1241
ARG A1242
TRP A1262
 None
 0.94A 1i1eA-2nm1A:
37.5		 1i1eA-2nm1A:
100.00
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
1I1E_A_DM2A3001_1
(BOTULINUM NEUROTOXIN
TYPE B)		 2nm1 BOTULINUM NEUROTOXIN
TYPE B
(Clostridium
botulinum) 		6 / 9 GLU A1190
GLY A1239
HIS A1241
SER A1260
TRP A1262
TYR A1263
 None
 0.63A 1i1eA-2nm1A:
37.5		 1i1eA-2nm1A:
100.00
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
1I1E_A_DM2A3001_1
(BOTULINUM NEUROTOXIN
TYPE B)		 2nm1 BOTULINUM NEUROTOXIN
TYPE B
(Clostridium
botulinum) 		5 / 9 GLU A1190
HIS A1241
ARG A1242
CYH A1258
TRP A1262
 None
 1.18A 1i1eA-2nm1A:
37.5		 1i1eA-2nm1A:
100.00
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1YKI_A_NFZA1219_1
(OXYGEN-INSENSITIVE
NAD(P)H
NITROREDUCTASE)		 2nm1 BOTULINUM NEUROTOXIN
TYPE B
(Clostridium
botulinum) 		4 / 8 ASN A1000
GLU A1287
GLY A1288
PHE A1053
 None
 0.74A 1ykiA-2nm1A:
undetectable
1ykiB-2nm1A:
undetectable		 1ykiA-2nm1A:
17.01
1ykiB-2nm1A:
17.01
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1YKI_B_NFZB2219_1
(OXYGEN-INSENSITIVE
NAD(P)H
NITROREDUCTASE)		 2nm1 BOTULINUM NEUROTOXIN
TYPE B
(Clostridium
botulinum) 		4 / 8 PHE A1053
ASN A1000
GLU A1287
GLY A1288
 None
 0.76A 1ykiA-2nm1A:
undetectable
1ykiB-2nm1A:
undetectable		 1ykiA-2nm1A:
17.01
1ykiB-2nm1A:
17.01
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1YKI_C_NFZC3219_1
(OXYGEN-INSENSITIVE
NAD(P)H
NITROREDUCTASE)		 2nm1 BOTULINUM NEUROTOXIN
TYPE B
(Clostridium
botulinum) 		4 / 8 ASN A1000
GLU A1287
GLY A1288
PHE A1053
 None
 0.75A 1ykiC-2nm1A:
undetectable
1ykiD-2nm1A:
undetectable		 1ykiC-2nm1A:
17.01
1ykiD-2nm1A:
17.01
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1YKI_D_NFZD4219_1
(OXYGEN-INSENSITIVE
NAD(P)H
NITROREDUCTASE)		 2nm1 BOTULINUM NEUROTOXIN
TYPE B
(Clostridium
botulinum) 		4 / 8 PHE A1053
ASN A1000
GLU A1287
GLY A1288
 None
 0.77A 1ykiC-2nm1A:
undetectable
1ykiD-2nm1A:
undetectable		 1ykiC-2nm1A:
17.01
1ykiD-2nm1A:
17.01
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2B60_B_RITB100_2
(GAG-POL POLYPROTEIN)		 2nm1 BOTULINUM NEUROTOXIN
TYPE B
(Clostridium
botulinum) 		5 / 11 ARG A 869
ASP A 877
GLY A 882
ALA A 883
ILE A1040
 None
 0.94A 2b60B-2nm1A:
undetectable		 2b60B-2nm1A:
13.27
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2PIW_A_T3A933_1
(ANDROGEN RECEPTOR)		 2nm1 BOTULINUM NEUROTOXIN
TYPE B
(Clostridium
botulinum) 		5 / 10 ILE A 946
GLU A 993
ASN A 990
TYR A 989
GLU A 988
 None
 1.32A 2piwA-2nm1A:
undetectable		 2piwA-2nm1A:
19.68
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2PLW_A_SAMA203_1
(RIBOSOMAL RNA
METHYLTRANSFERASE,
PUTATIVE)		 2nm1 BOTULINUM NEUROTOXIN
TYPE B
(Clostridium
botulinum) 		3 / 3 SER A 903
ASP A1047
ASP A1049
 None
 0.55A 2plwA-2nm1A:
undetectable		 2plwA-2nm1A:
20.14
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2PRG_A_BRLA1_2
(PEROXISOME
PROLIFERATOR
ACTIVATED RECEPTOR
GAMMA)		 2nm1 BOTULINUM NEUROTOXIN
TYPE B
(Clostridium
botulinum) 		3 / 3 ILE A 952
ILE A 934
LEU A 875
 None
 0.53A 2prgA-2nm1A:
undetectable		 2prgA-2nm1A:
20.32
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2W98_B_P1ZB1358_1
(PROSTAGLANDIN
REDUCTASE 2)		 2nm1 BOTULINUM NEUROTOXIN
TYPE B
(Clostridium
botulinum) 		4 / 6 ASP A1165
TYR A1166
TYR A1168
LEU A1169
 None
 1.10A 2w98A-2nm1A:
undetectable
2w98B-2nm1A:
undetectable		 2w98A-2nm1A:
21.67
2w98B-2nm1A:
21.67
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2W98_B_P1ZB1358_1
(PROSTAGLANDIN
REDUCTASE 2)		 2nm1 BOTULINUM NEUROTOXIN
TYPE B
(Clostridium
botulinum) 		4 / 6 TYR A1183
TYR A1181
PHE A1257
LEU A1195
 None
 1.04A 2w98A-2nm1A:
undetectable
2w98B-2nm1A:
undetectable		 2w98A-2nm1A:
21.67
2w98B-2nm1A:
21.67
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3U9F_K_CLMK221_1
(CHLORAMPHENICOL
ACETYLTRANSFERASE)		 2nm1 BOTULINUM NEUROTOXIN
TYPE B
(Clostridium
botulinum) 		3 / 3 PHE A1243
CYH A1258
HIS A1241
 None
 1.28A 3u9fL-2nm1A:
undetectable		 3u9fL-2nm1A:
17.69
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4C9N_A_CAMA1419_0
(CYTOCHROME P450)		 2nm1 BOTULINUM NEUROTOXIN
TYPE B
(Clostridium
botulinum) 		4 / 8 TYR A1213
LEU A1224
LEU A1237
GLY A1236
 None
 0.88A 4c9nA-2nm1A:
undetectable		 4c9nA-2nm1A:
22.18
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4F8Y_C_VK3C202_1
(NADPH QUINONE
OXIDOREDUCTASE)		 2nm1 BOTULINUM NEUROTOXIN
TYPE B
(Clostridium
botulinum) 		4 / 7 TYR A1140
LEU A1139
ASN A1000
TYR A 937
 None
 1.26A 4f8yC-2nm1A:
undetectable
4f8yD-2nm1A:
undetectable		 4f8yC-2nm1A:
16.89
4f8yD-2nm1A:
16.89
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4NTX_A_AMRA509_1
(ACID-SENSING ION
CHANNEL 1
BASIC PHOSPHOLIPASE
A2 HOMOLOG TX-BETA)		 2nm1 BOTULINUM NEUROTOXIN
TYPE B
(Clostridium
botulinum) 		4 / 6 GLU A 997
ASP A1214
GLU A1212
ASN A1279
 None
 1.18A 4ntxA-2nm1A:
undetectable
4ntxC-2nm1A:
undetectable		 4ntxA-2nm1A:
20.83
4ntxC-2nm1A:
14.12
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4O1E_A_C2FA3000_0
(DIHYDROPTEROATE
SYNTHASE DHPS)		 2nm1 BOTULINUM NEUROTOXIN
TYPE B
(Clostridium
botulinum) 		5 / 12 ASN A1000
ILE A 952
LEU A1044
GLY A 968
ASN A 990
 None
 1.09A 4o1eA-2nm1A:
undetectable		 4o1eA-2nm1A:
19.41
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4O1E_B_C2FB4000_0
(DIHYDROPTEROATE
SYNTHASE DHPS)		 2nm1 BOTULINUM NEUROTOXIN
TYPE B
(Clostridium
botulinum) 		5 / 12 ASN A1000
ILE A 952
LEU A1044
GLY A 968
ASN A 990
 None
 1.09A 4o1eB-2nm1A:
undetectable		 4o1eB-2nm1A:
19.41
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5CSW_A_P06A801_2
(SERINE/THREONINE-PRO
TEIN KINASE B-RAF)		 2nm1 BOTULINUM NEUROTOXIN
TYPE B
(Clostridium
botulinum) 		3 / 3 PHE A 899
ILE A 909
ASP A 889
 None
 0.65A 5cswA-2nm1A:
undetectable		 5cswA-2nm1A:
21.17
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5CSW_B_P06B801_2
(SERINE/THREONINE-PRO
TEIN KINASE B-RAF)		 2nm1 BOTULINUM NEUROTOXIN
TYPE B
(Clostridium
botulinum) 		3 / 3 PHE A 899
ILE A 909
ASP A 889
 None
 0.68A 5cswB-2nm1A:
undetectable		 5cswB-2nm1A:
21.17
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5HW8_A_FK5A201_1
(FK506-BINDING
PROTEIN 1)		 2nm1 BOTULINUM NEUROTOXIN
TYPE B
(Clostridium
botulinum) 		5 / 11 PHE A 926
ILE A 953
ILE A 971
ILE A1031
ILE A1028
 None
 1.10A 5hw8A-2nm1A:
undetectable
5hw8D-2nm1A:
undetectable		 5hw8A-2nm1A:
13.68
5hw8D-2nm1A:
13.68