SIMILAR PATTERN OF AMINO ACIDS MAPPED TO '2num'

List of Similar Pattern of Amino Acids

Hit pattern: 3D amino acid arrangements similar to known drug binding site
Query pattern: Residues from known binding site for annotated drug that match the hit pattern

(Click on the DrReposER ID to view details on interfaces and similar patterns of amino acids)
(Click on the view link on the last column to view superposed patterns of amino acids)
Filter list by:
DrReposER ID / Desc. Hit
PDBID		 Hit
Macromolecule		 Res.
Matches		 Interface HETATM RMSD Dali
Z-score		 Seq.
Identity (%)		 View Dock
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1TLS_A_C2FA266_0
(THYMIDYLATE SYNTHASE)		 2num UBIQUINOL-CYTOCHROME
C REDUCTASE
IRON-SULFUR SUBUNIT
(Rhodobacter
sphaeroides) 		5 / 12 SER A 154
ILE A 162
GLY A 160
PHE A 156
ALA A  98
 FES  A 200 (-3.1A)
None
None
None
None
 0.98A 1tlsA-2numA:
undetectable		 1tlsA-2numA:
19.12
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1TLS_B_C2FB266_0
(THYMIDYLATE SYNTHASE)		 2num UBIQUINOL-CYTOCHROME
C REDUCTASE
IRON-SULFUR SUBUNIT
(Rhodobacter
sphaeroides) 		5 / 12 SER A 154
ILE A 162
GLY A 160
PHE A 156
ALA A  98
 FES  A 200 (-3.1A)
None
None
None
None
 1.06A 1tlsB-2numA:
undetectable		 1tlsB-2numA:
19.12
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1U18_B_HSMB402_1
(NITROPHORIN 1)		 2num UBIQUINOL-CYTOCHROME
C REDUCTASE
IRON-SULFUR SUBUNIT
(Rhodobacter
sphaeroides) 		4 / 5 ASP A 117
GLU A 121
LEU A 123
LEU A 116
 None
 1.17A 1u18B-2numA:
undetectable		 1u18B-2numA:
19.10
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2OXT_A_SAMA300_0
(NUCLEOSIDE-2'-O-METH
YLTRANSFERASE)		 2num UBIQUINOL-CYTOCHROME
C REDUCTASE
IRON-SULFUR SUBUNIT
(Rhodobacter
sphaeroides) 		5 / 12 GLY A 120
THR A 115
LEU A 116
GLU A 121
ASP A  81
 None
 0.99A 2oxtA-2numA:
undetectable		 2oxtA-2numA:
21.07
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3MBG_A_ACTA500_0
(FAD-LINKED
SULFHYDRYL OXIDASE
ALR)		 2num UBIQUINOL-CYTOCHROME
C REDUCTASE
IRON-SULFUR SUBUNIT
(Rhodobacter
sphaeroides) 		4 / 4 ALA A 167
HIS A 131
HIS A 152
PRO A 166
 None
FES  A 200 (-3.2A)
FES  A 200 (-3.2A)
FES  A 200 ( 4.7A)
 1.32A 3mbgA-2numA:
undetectable		 3mbgA-2numA:
18.30
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3MBG_C_ACTC900_0
(FAD-LINKED
SULFHYDRYL OXIDASE
ALR)		 2num UBIQUINOL-CYTOCHROME
C REDUCTASE
IRON-SULFUR SUBUNIT
(Rhodobacter
sphaeroides) 		4 / 4 ALA A 167
HIS A 131
HIS A 152
PRO A 166
 None
FES  A 200 (-3.2A)
FES  A 200 (-3.2A)
FES  A 200 ( 4.7A)
 1.32A 3mbgC-2numA:
undetectable		 3mbgC-2numA:
18.30
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4FOX_D_D16D301_1
(THYMIDYLATE SYNTHASE)		 2num UBIQUINOL-CYTOCHROME
C REDUCTASE
IRON-SULFUR SUBUNIT
(Rhodobacter
sphaeroides) 		5 / 12 SER A 154
ILE A 162
GLY A 160
PHE A 156
ALA A  98
 FES  A 200 (-3.1A)
None
None
None
None
 0.97A 4foxD-2numA:
undetectable		 4foxD-2numA:
19.69
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4ICL_A_T27A601_1
(REVERSE
TRANSCRIPTASE/RIBONU
CLEASE H)		 2num UBIQUINOL-CYTOCHROME
C REDUCTASE
IRON-SULFUR SUBUNIT
(Rhodobacter
sphaeroides) 		5 / 12 PRO A 174
LEU A 186
VAL A  54
VAL A  65
PHE A 178
 None
 1.48A 4iclA-2numA:
undetectable		 4iclA-2numA:
12.03
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4KFB_A_T27A607_1
(REVERSE
TRANSCRIPTASE/RIBONU
CLEASE H,
EXORIBONUCLEA P66 RT)		 2num UBIQUINOL-CYTOCHROME
C REDUCTASE
IRON-SULFUR SUBUNIT
(Rhodobacter
sphaeroides) 		5 / 12 PRO A 174
LEU A 186
VAL A  54
VAL A  65
PHE A 178
 None
 1.47A 4kfbA-2numA:
undetectable		 4kfbA-2numA:
12.03
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4R3A_A_RBFA402_2
(BLUE-LIGHT-ACTIVATED
HISTIDINE KINASE 2)		 2num UBIQUINOL-CYTOCHROME
C REDUCTASE
IRON-SULFUR SUBUNIT
(Rhodobacter
sphaeroides) 		4 / 8 GLU A 121
VAL A 124
LEU A 123
GLY A  85
 None
 0.90A 4r3aA-2numA:
undetectable		 4r3aA-2numA:
20.18
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5CYM_A_T27A601_1
(HIV-1 REVERSE
TRANSCRIPTASE, P66
SUBUNIT)		 2num UBIQUINOL-CYTOCHROME
C REDUCTASE
IRON-SULFUR SUBUNIT
(Rhodobacter
sphaeroides) 		5 / 12 PRO A 174
LEU A 186
VAL A  54
VAL A  65
PHE A 178
 None
 1.49A 5cymA-2numA:
undetectable		 5cymA-2numA:
12.03
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
6ELI_A_T27A701_1
(REVERSE
TRANSCRIPTASE)		 2num UBIQUINOL-CYTOCHROME
C REDUCTASE
IRON-SULFUR SUBUNIT
(Rhodobacter
sphaeroides) 		5 / 12 PRO A 174
LEU A 186
VAL A  54
VAL A  65
PHE A 178
 None
 1.49A 6eliA-2numA:
undetectable		 6eliA-2numA:
20.83