SIMILAR PATTERN OF AMINO ACIDS MAPPED TO '2ocb'

List of Similar Pattern of Amino Acids

Hit pattern: 3D amino acid arrangements similar to known drug binding site
Query pattern: Residues from known binding site for annotated drug that match the hit pattern

(Click on the DrReposER ID to view details on interfaces and similar patterns of amino acids)
(Click on the view link on the last column to view superposed patterns of amino acids)
Filter list by:
DrReposER ID / Desc. Hit
PDBID		 Hit
Macromolecule		 Res.
Matches		 Interface HETATM RMSD Dali
Z-score		 Seq.
Identity (%)		 View Dock
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1E7A_A_PFLA4002_1
(SERUM ALBUMIN)		 2ocb RAS-RELATED PROTEIN
RAB-9B
(Homo
sapiens) 		3 / 3 PHE A  32
LEU A  23
SER A 154
 GNP  A 201 (-4.2A)
None
GNP  A 201 (-3.5A)
 0.81A 1e7aA-2ocbA:
undetectable		 1e7aA-2ocbA:
16.16
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2B25_A_SAMA601_0
(HYPOTHETICAL PROTEIN)		 2ocb RAS-RELATED PROTEIN
RAB-9B
(Homo
sapiens) 		5 / 12 THR A  39
GLY A  19
GLY A  17
GLY A  65
ASP A 127
 MG  A 202 ( 3.2A)
GNP  A 201 (-3.5A)
GNP  A 201 (-3.8A)
GNP  A 201 (-3.2A)
GNP  A 201 (-3.0A)
 0.95A 2b25A-2ocbA:
2.2		 2b25A-2ocbA:
20.23
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4EYR_B_RITB301_2
(HIV-1 PROTEASE)		 2ocb RAS-RELATED PROTEIN
RAB-9B
(Homo
sapiens) 		4 / 8 GLY A  79
ALA A  80
ASP A  81
THR A  63
 None
 0.75A 4eyrB-2ocbA:
undetectable		 4eyrB-2ocbA:
19.55