SIMILAR PATTERN OF AMINO ACIDS MAPPED TO '2odm'

List of Similar Pattern of Amino Acids

Hit pattern: 3D amino acid arrangements similar to known drug binding site
Query pattern: Residues from known binding site for annotated drug that match the hit pattern

(Click on the DrReposER ID to view details on interfaces and similar patterns of amino acids)
(Click on the view link on the last column to view superposed patterns of amino acids)

Filter list by:

	DrReposER ID / Desc.	Hit PDBID	Hit Macromolecule	Res. Matches	Interface	HETATM	RMSD	Dali Z-score	Seq. Identity (%)	View	Dock
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.	2Q72_A_IXXA801_1 (TRANSPORTER)	2odm	UPF0358 PROTEIN MW0995 (Staphylococcus aureus)	5 / 11	LEU A 12 ILE A 73 ALA A 59 LEU A 52 ASP A 18	None	1.21A	2q72A-2odmA: undetectable	2q72A-2odmA: 10.81
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.	4W5N_A_IPHA902_0 (PROTEIN ARGONAUTE-2)	2odm	UPF0358 PROTEIN MW0995 (Staphylococcus aureus)	4 / 6	LEU A 25 ILE A 26 LEU A 45 TYR A 41	None	0.93A	4w5nA-2odmA: undetectable	4w5nA-2odmA: 7.85
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.	5UHB_C_RFPC1201_2 (DNA-DIRECTED RNA POLYMERASE SUBUNIT BETA)	2odm	UPF0358 PROTEIN MW0995 (Staphylococcus aureus)	3 / 3	PHE A 50 ASP A 46 LEU A 23	None	0.62A	5uhbC-2odmA: undetectable	5uhbC-2odmA: 6.56
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.	5UHC_C_RFPC1201_2 (DNA-DIRECTED RNA POLYMERASE SUBUNIT BETA)	2odm	UPF0358 PROTEIN MW0995 (Staphylococcus aureus)	3 / 3	PHE A 50 ASP A 46 LEU A 23	None	0.58A	5uhcC-2odmA: undetectable	5uhcC-2odmA: 6.56
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.	5UHC_C_RFPC1201_2 (DNA-DIRECTED RNA POLYMERASE SUBUNIT BETA)	2odm	UPF0358 PROTEIN MW0995 (Staphylococcus aureus)	3 / 3	PHE A 50 ASP A 46 LEU A 75	None	0.76A	5uhcC-2odmA: undetectable	5uhcC-2odmA: 6.56

[["DrReposER ID","Desc.","Hit PDB","Hit molecule","Hit organism","Res. no.","Interface","HETATM","RMSD","Z-score","Seq ID"],["2Q72_A_IXXA801_1","TRANSPORTER","2odm","UPF0358 PROTEIN MW0995","Staphylococcus aureus",5,"LEU A  12;ILE A  73;ALA A  59;LEU A  52;ASP A  18","None","1.21A","2q72A-2odmA:undetectable","2q72A-2odmA:10.81"],["4W5N_A_IPHA902_0","PROTEIN ARGONAUTE-2","2odm","UPF0358 PROTEIN MW0995","Staphylococcus aureus",4,"LEU A  25;ILE A  26;LEU A  45;TYR A  41","None","0.93A","4w5nA-2odmA:undetectable","4w5nA-2odmA:7.85"],["5UHB_C_RFPC1201_2","DNA-DIRECTED RNA POLYMERASE SUBUNIT BETA","2odm","UPF0358 PROTEIN MW0995","Staphylococcus aureus",3,"PHE A  50;ASP A  46;LEU A  23","None","0.62A","5uhbC-2odmA:undetectable","5uhbC-2odmA:6.56"],["5UHC_C_RFPC1201_2","DNA-DIRECTED RNA POLYMERASE SUBUNIT BETA","2odm","UPF0358 PROTEIN MW0995","Staphylococcus aureus",3,"PHE A  50;ASP A  46;LEU A  23","None","0.58A","5uhcC-2odmA:undetectable","5uhcC-2odmA:6.56"],["5UHC_C_RFPC1201_2","DNA-DIRECTED RNA POLYMERASE SUBUNIT BETA","2odm","UPF0358 PROTEIN MW0995","Staphylococcus aureus",3,"PHE A  50;ASP A  46;LEU A  75","None","0.76A","5uhcC-2odmA:undetectable","5uhcC-2odmA:6.56"]]