SIMILAR PATTERN OF AMINO ACIDS MAPPED TO '2oka'

List of Similar Pattern of Amino Acids

Hit pattern: 3D amino acid arrangements similar to known drug binding site
Query pattern: Residues from known binding site for annotated drug that match the hit pattern

(Click on the DrReposER ID to view details on interfaces and similar patterns of amino acids)
(Click on the view link on the last column to view superposed patterns of amino acids)

Filter list by:

	DrReposER ID / Desc.	Hit PDBID	Hit Macromolecule	Res. Matches	Interface	HETATM	RMSD	Dali Z-score	Seq. Identity (%)	View	Dock
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.	1EIZ_A_SAMA301_1 (FTSJ)	2oka	HYPOTHETICAL PROTEIN (Pseudomonas aeruginosa)	3 / 3	ASP A 83 ASP A 35 ASP A 87	None	0.72A	1eizA-2okaA: undetectable	1eizA-2okaA: 19.13
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.	1EJ0_A_SAMA301_1 (FTSJ)	2oka	HYPOTHETICAL PROTEIN (Pseudomonas aeruginosa)	3 / 3	ASP A 83 ASP A 35 ASP A 87	None	0.75A	1ej0A-2okaA: undetectable	1ej0A-2okaA: 19.13
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.	3DOU_A_SAMA1_1 (RIBOSOMAL RNA LARGE SUBUNIT METHYLTRANSFERASE J)	2oka	HYPOTHETICAL PROTEIN (Pseudomonas aeruginosa)	3 / 3	ASP A 83 ASP A 35 ASP A 87	None	0.66A	3douA-2okaA: undetectable	3douA-2okaA: 18.65
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.	4FP9_D_SAMD401_1 (METHYLTRANSFERASE NSUN4)	2oka	HYPOTHETICAL PROTEIN (Pseudomonas aeruginosa)	3 / 3	ASP A 83 ARG A 86 ASP A 35	None	0.88A	4fp9D-2okaA: undetectable	4fp9D-2okaA: 16.15
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.	4K4Y_E_ACTE503_0 (RNA-DEPENDENT RNA POLYMERASE)	2oka	HYPOTHETICAL PROTEIN (Pseudomonas aeruginosa)	4 / 4	LYS A 75 LEU A 74 GLU A 28 LEU A 25	None	1.43A	4k4yE-2okaA: undetectable	4k4yE-2okaA: 13.35

[["DrReposER ID","Desc.","Hit PDB","Hit molecule","Hit organism","Res. no.","Interface","HETATM","RMSD","Z-score","Seq ID"],["1EIZ_A_SAMA301_1","FTSJ","2oka","HYPOTHETICAL PROTEIN","Pseudomonas aeruginosa",3,"ASP A  83;ASP A  35;ASP A  87","None","0.72A","1eizA-2okaA:undetectable","1eizA-2okaA:19.13"],["1EJ0_A_SAMA301_1","FTSJ","2oka","HYPOTHETICAL PROTEIN","Pseudomonas aeruginosa",3,"ASP A  83;ASP A  35;ASP A  87","None","0.75A","1ej0A-2okaA:undetectable","1ej0A-2okaA:19.13"],["3DOU_A_SAMA1_1","RIBOSOMAL RNA LARGE SUBUNIT METHYLTRANSFERASE J","2oka","HYPOTHETICAL PROTEIN","Pseudomonas aeruginosa",3,"ASP A  83;ASP A  35;ASP A  87","None","0.66A","3douA-2okaA:undetectable","3douA-2okaA:18.65"],["4FP9_D_SAMD401_1","METHYLTRANSFERASE NSUN4","2oka","HYPOTHETICAL PROTEIN","Pseudomonas aeruginosa",3,"ASP A  83;ARG A  86;ASP A  35","None","0.88A","4fp9D-2okaA:undetectable","4fp9D-2okaA:16.15"],["4K4Y_E_ACTE503_0","RNA-DEPENDENT RNA POLYMERASE","2oka","HYPOTHETICAL PROTEIN","Pseudomonas aeruginosa",4,"LYS A  75;LEU A  74;GLU A  28;LEU A  25","None","1.43A","4k4yE-2okaA:undetectable","4k4yE-2okaA:13.35"]]