SIMILAR PATTERN OF AMINO ACIDS MAPPED TO '2oqk'

List of Similar Pattern of Amino Acids

Hit pattern: 3D amino acid arrangements similar to known drug binding site

Query pattern: Residues from known binding site for annotated drug that match the hit pattern


(Click on the DrReposER ID to view details on interfaces and similar patterns of amino acids)
(Click on the view link on the last column to view superposed patterns of amino acids)
Filter list by:
DrReposER ID / Desc. Hit
PDBID
Hit
Macromolecule
Res.
Matches
Interface HETATM RMSD Dali
Z-score
Seq.
Identity (%)
View Dock
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5AYF_A_C7HA402_1
(HISTONE-LYSINE
N-METHYLTRANSFERASE
SETD7)
2oqk PUTATIVE TRANSLATION
INITIATION FACTOR
EIF-1A

(Cryptosporidium
parvum)
4 / 5 GLY A 107
TYR A  95
TYR A  35
GLY A  36
None
0.83A 5ayfA-2oqkA:
undetectable
5ayfA-2oqkA:
19.16
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5KC4_E_RBFE201_2
(RIBOFLAVIN
TRANSPORTER RIBU)
2oqk PUTATIVE TRANSLATION
INITIATION FACTOR
EIF-1A

(Cryptosporidium
parvum)
3 / 3 LYS A  88
ASP A  86
ILE A  91
None
0.68A 5kc4E-2oqkA:
undetectable
5kc4E-2oqkA:
19.57
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
6DWD_D_GLYD713_0
(DEOXYNUCLEOSIDE
TRIPHOSPHATE
TRIPHOSPHOHYDROLASE
SAMHD1)
2oqk PUTATIVE TRANSLATION
INITIATION FACTOR
EIF-1A

(Cryptosporidium
parvum)
3 / 3 ARG A  46
HIS A  60
ARG A  82
SO4  A 201 (-3.9A)
SO4  A 201 (-4.4A)
SO4  A 201 (-3.0A)
0.67A 6dwdD-2oqkA:
undetectable
6dwdD-2oqkA:
12.31