SIMILAR PATTERN OF AMINO ACIDS MAPPED TO '2q1w'

List of Similar Pattern of Amino Acids

Hit pattern: 3D amino acid arrangements similar to known drug binding site
Query pattern: Residues from known binding site for annotated drug that match the hit pattern

(Click on the DrReposER ID to view details on interfaces and similar patterns of amino acids)
(Click on the view link on the last column to view superposed patterns of amino acids)
Filter list by:
DrReposER ID / Desc. Hit
PDBID		 Hit
Macromolecule		 Res.
Matches		 Interface HETATM RMSD Dali
Z-score		 Seq.
Identity (%)		 View Dock
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1GTN_E_TRPE81_0
(TRP RNA-BINDING
ATTENUATION PROTEIN)		 2q1w PUTATIVE NUCLEOTIDE
SUGAR EPIMERASE/
DEHYDRATASE
(Bordetella
bronchiseptica) 		4 / 6 THR A 211
GLY A  14
THR A  76
ILE A   9
 None
None
NAD  A 501 (-4.5A)
None
 0.88A 1gtnD-2q1wA:
undetectable
1gtnE-2q1wA:
undetectable		 1gtnD-2q1wA:
18.01
1gtnE-2q1wA:
18.01
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1MMT_A_H4BA1426_1
(PHENYLALANINE-4-HYDR
OXYLASE)		 2q1w PUTATIVE NUCLEOTIDE
SUGAR EPIMERASE/
DEHYDRATASE
(Bordetella
bronchiseptica) 		5 / 11 VAL A 215
LEU A  20
LEU A  21
LEU A  48
THR A 211
 None
 1.32A 1mmtA-2q1wA:
undetectable		 1mmtA-2q1wA:
22.04
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2UYQ_A_SAMA1311_0
(HYPOTHETICAL PROTEIN
ML2640)		 2q1w PUTATIVE NUCLEOTIDE
SUGAR EPIMERASE/
DEHYDRATASE
(Bordetella
bronchiseptica) 		5 / 7 ALA A  18
GLY A  14
ASP A  26
LEU A  22
ARG A  24
 None
 1.42A 2uyqA-2q1wA:
4.9		 2uyqA-2q1wA:
24.72
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3EEY_J_SAMJ300_0
(PUTATIVE RRNA
METHYLASE)		 2q1w PUTATIVE NUCLEOTIDE
SUGAR EPIMERASE/
DEHYDRATASE
(Bordetella
bronchiseptica) 		5 / 12 GLY A  37
ASP A  32
ILE A  31
GLY A  30
THR A  76
 NAD  A 501 (-2.9A)
NAD  A 501 (-2.8A)
NAD  A 501 ( 4.8A)
None
NAD  A 501 (-4.5A)
 1.10A 3eeyJ-2q1wA:
7.4		 3eeyJ-2q1wA:
21.96
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3U9F_D_CLMD221_0
(CHLORAMPHENICOL
ACETYLTRANSFERASE)		 2q1w PUTATIVE NUCLEOTIDE
SUGAR EPIMERASE/
DEHYDRATASE
(Bordetella
bronchiseptica) 		5 / 12 THR A  76
PHE A 115
LEU A  21
VAL A   4
ALA A 214
 NAD  A 501 (-4.5A)
None
None
None
None
 1.14A 3u9fD-2q1wA:
undetectable
3u9fE-2q1wA:
undetectable		 3u9fD-2q1wA:
19.15
3u9fE-2q1wA:
19.15
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4E1V_E_URFE1301_1
(URIDINE
PHOSPHORYLASE)		 2q1w PUTATIVE NUCLEOTIDE
SUGAR EPIMERASE/
DEHYDRATASE
(Bordetella
bronchiseptica) 		4 / 8 THR A  92
GLY A  97
ILE A  55
VAL A 100
 NAD  A 501 (-2.9A)
None
NAD  A 501 (-3.9A)
None
 0.99A 4e1vE-2q1wA:
2.4		 4e1vE-2q1wA:
22.35
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5AJQ_A_DB8A800_2
(SERINE/THREONINE-PRO
TEIN KINASE 10)		 2q1w PUTATIVE NUCLEOTIDE
SUGAR EPIMERASE/
DEHYDRATASE
(Bordetella
bronchiseptica) 		4 / 4 VAL A  95
ILE A  55
ASN A  62
VAL A 101
 None
NAD  A 501 (-3.9A)
None
None
 1.34A 5ajqA-2q1wA:
undetectable		 5ajqA-2q1wA:
23.93
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5M50_B_TA1B502_1
(TUBULIN BETA-2B
CHAIN)		 2q1w PUTATIVE NUCLEOTIDE
SUGAR EPIMERASE/
DEHYDRATASE
(Bordetella
bronchiseptica) 		5 / 12 VAL A 215
ASP A 216
ARG A  24
GLY A  25
LEU A  22
 None
 1.44A 5m50B-2q1wA:
6.6		 5m50B-2q1wA:
22.69
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5N9X_A_THRA601_0
(ADENYLATION DOMAIN)		 2q1w PUTATIVE NUCLEOTIDE
SUGAR EPIMERASE/
DEHYDRATASE
(Bordetella
bronchiseptica) 		4 / 7 PHE A 276
ASP A 275
GLY A 221
HIS A 220
 None
 1.03A 5n9xA-2q1wA:
undetectable		 5n9xA-2q1wA:
22.04