SIMILAR PATTERN OF AMINO ACIDS MAPPED TO '2rcd'

List of Similar Pattern of Amino Acids

Hit pattern: 3D amino acid arrangements similar to known drug binding site
Query pattern: Residues from known binding site for annotated drug that match the hit pattern

(Click on the DrReposER ID to view details on interfaces and similar patterns of amino acids)
(Click on the view link on the last column to view superposed patterns of amino acids)
Filter list by:
DrReposER ID / Desc. Hit
PDBID		 Hit
Macromolecule		 Res.
Matches		 Interface HETATM RMSD Dali
Z-score		 Seq.
Identity (%)		 View Dock
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1BDW_B_DVAB8_0
(GRAMICIDIN A)		 2rcd UNCHARACTERIZED
PROTEIN
(Pectobacterium
atrosepticum) 		3 / 3 VAL A  89
VAL A  79
TRP A 109
 None
 0.68A 1bdwA-2rcdA:
undetectable
1bdwB-2rcdA:
undetectable		 1bdwA-2rcdA:
8.93
1bdwB-2rcdA:
8.93
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1E7B_B_HLTB4002_1
(SERUM ALBUMIN)		 2rcd UNCHARACTERIZED
PROTEIN
(Pectobacterium
atrosepticum) 		4 / 4 ARG A  21
ALA A  25
ALA A  32
GLU A  36
 None
 1.24A 1e7bB-2rcdA:
undetectable		 1e7bB-2rcdA:
11.11
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4MK4_B_CHDB502_0
(FERROCHELATASE,
MITOCHONDRIAL)		 2rcd UNCHARACTERIZED
PROTEIN
(Pectobacterium
atrosepticum) 		4 / 6 PHE A  38
ILE A  59
ARG A  46
VAL A 123
 None
 1.30A 4mk4B-2rcdA:
undetectable		 4mk4B-2rcdA:
17.28
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5Y9Y_A_ACTA412_0
(UNCHARACTERIZED
PROTEIN KDOO)		 2rcd UNCHARACTERIZED
PROTEIN
(Pectobacterium
atrosepticum) 		3 / 3 ARG A  66
PHE A  94
ARG A  96
 None
 1.21A 5y9yA-2rcdA:
undetectable		 5y9yA-2rcdA:
20.25
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5YNM_A_SAMA401_0
(NSP16 PROTEIN)		 2rcd UNCHARACTERIZED
PROTEIN
(Pectobacterium
atrosepticum) 		5 / 12 GLY A  84
GLY A   0
ASP A  86
ASP A  14
ASP A   5
 None
 1.33A 5ynmA-2rcdA:
undetectable		 5ynmA-2rcdA:
18.89
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
6FGD_A_ACTA826_0
(GEPHYRIN)		 2rcd UNCHARACTERIZED
PROTEIN
(Pectobacterium
atrosepticum) 		3 / 3 HIS A  40
ARG A  60
ILE A  56
 None
 0.81A 6fgdA-2rcdA:
undetectable		 6fgdA-2rcdA:
20.11