SIMILAR PATTERN OF AMINO ACIDS MAPPED TO '2vkc'

List of Similar Pattern of Amino Acids

Hit pattern: 3D amino acid arrangements similar to known drug binding site
Query pattern: Residues from known binding site for annotated drug that match the hit pattern

(Click on the DrReposER ID to view details on interfaces and similar patterns of amino acids)
(Click on the view link on the last column to view superposed patterns of amino acids)
Filter list by:
DrReposER ID / Desc. Hit
PDBID		 Hit
Macromolecule		 Res.
Matches		 Interface HETATM RMSD Dali
Z-score		 Seq.
Identity (%)		 View Dock
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3QEO_B_LLTB261_1
(DEOXYCYTIDINE KINASE)		 2vkc NEDD4-BINDING
PROTEIN 2
(Homo
sapiens) 		4 / 7 VAL A1767
LEU A1750
TYR A1749
LEU A1693
 None
 0.90A 3qeoB-2vkcA:
undetectable		 3qeoB-2vkcA:
21.33
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5TUD_D_ERMD1201_2
(5-HYDROXYTRYPTAMINE
RECEPTOR 2B,SOLUBLE
CYTOCHROME B562
CHIMERA)		 2vkc NEDD4-BINDING
PROTEIN 2
(Homo
sapiens) 		4 / 6 LEU A1725
VAL A1727
THR A1729
LEU A1709
 None
 0.93A 5tudD-2vkcA:
undetectable		 5tudD-2vkcA:
13.11