SIMILAR PATTERN OF AMINO ACIDS MAPPED TO '2vmf'

List of Similar Pattern of Amino Acids

Hit pattern: 3D amino acid arrangements similar to known drug binding site

Query pattern: Residues from known binding site for annotated drug that match the hit pattern


(Click on the DrReposER ID to view details on interfaces and similar patterns of amino acids)
(Click on the view link on the last column to view superposed patterns of amino acids)
Filter list by:
DrReposER ID / Desc. Hit
PDBID
Hit
Macromolecule
Res.
Matches
Interface HETATM RMSD Dali
Z-score
Seq.
Identity (%)
View Dock
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1MXG_A_ACRA443_1
(ALPHA AMYLASE)
2vmf BETA-MANNOSIDASE
(Bacteroides
thetaiotaomicron)
4 / 8 ASN A 178
ASP A 199
GLU A 462
TRP A 200
EDO  A1876 (-3.2A)
MVL  A1865 ( 2.9A)
MVL  A1865 ( 2.8A)
MVL  A1865 (-4.2A)
1.20A 1mxgA-2vmfA:
7.7
1mxgA-2vmfA:
19.62
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1N4H_A_REAA500_1
(NUCLEAR RECEPTOR
ROR-BETA)
2vmf BETA-MANNOSIDASE
(Bacteroides
thetaiotaomicron)
5 / 11 ILE A 414
VAL A 416
ARG A 507
VAL A 350
ALA A 357
None
None
EDO  A1869 ( 3.7A)
None
None
1.21A 1n4hA-2vmfA:
undetectable
1n4hA-2vmfA:
15.87
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1SBR_A_VIBA501_1
(YKOF)
2vmf BETA-MANNOSIDASE
(Bacteroides
thetaiotaomicron)
4 / 8 PHE A 552
SER A 554
LEU A 643
ILE A 394
None
0.97A 1sbrA-2vmfA:
undetectable
1sbrA-2vmfA:
12.69
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1U70_A_MTXA187_1
(DIHYDROFOLATE
REDUCTASE)
2vmf BETA-MANNOSIDASE
(Bacteroides
thetaiotaomicron)
5 / 12 ALA A 439
ARG A 190
GLN A 418
PRO A 193
TYR A 137
None
1.35A 1u70A-2vmfA:
undetectable
1u70A-2vmfA:
12.08
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1Z2B_C_VLBC800_1
(TUBULIN BETA CHAIN
TUBULIN ALPHA CHAIN)
2vmf BETA-MANNOSIDASE
(Bacteroides
thetaiotaomicron)
4 / 8 VAL A 262
TYR A 308
THR A 292
LEU A 240
None
1.03A 1z2bB-2vmfA:
undetectable
1z2bB-2vmfA:
20.53
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2BXF_A_DZPA2001_1
(SERUM ALBUMIN)
2vmf BETA-MANNOSIDASE
(Bacteroides
thetaiotaomicron)
5 / 12 PHE A 217
LEU A 215
LEU A 109
VAL A 141
LEU A 122
None
1.23A 2bxfA-2vmfA:
undetectable
2bxfA-2vmfA:
19.88
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2EIM_J_CHDJ60_0
(CYTOCHROME C OXIDASE
POLYPEPTIDE
VIIA-HEART)
2vmf BETA-MANNOSIDASE
(Bacteroides
thetaiotaomicron)
4 / 5 ARG A 216
MET A  34
THR A 214
LEU A  36
None
1.37A 2eimJ-2vmfA:
undetectable
2eimJ-2vmfA:
5.66
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2HMY_B_SAMB328_0
(PROTEIN
(CYTOSINE-SPECIFIC
METHYLTRANSFERASE
HHAI))
2vmf BETA-MANNOSIDASE
(Bacteroides
thetaiotaomicron)
5 / 12 PHE A 714
GLY A 716
ASP A 830
PRO A 785
LEU A 784
None
1.07A 2hmyB-2vmfA:
undetectable
2hmyB-2vmfA:
19.04
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2NO0_A_GEOA302_1
(DEOXYCYTIDINE KINASE)
2vmf BETA-MANNOSIDASE
(Bacteroides
thetaiotaomicron)
5 / 12 VAL A 141
LEU A 215
MET A  34
PHE A 217
GLN A 101
None
1.32A 2no0A-2vmfA:
undetectable
2no0A-2vmfA:
19.38
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2NO0_B_GEOB302_1
(DEOXYCYTIDINE KINASE)
2vmf BETA-MANNOSIDASE
(Bacteroides
thetaiotaomicron)
5 / 12 VAL A 141
LEU A 215
MET A  34
PHE A 217
GLN A 101
None
1.29A 2no0B-2vmfA:
undetectable
2no0B-2vmfA:
19.38
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2VZS_A_GCSA1902_1
(EXO-BETA-D-GLUCOSAMI
NIDASE)
2vmf BETA-MANNOSIDASE
(Bacteroides
thetaiotaomicron)
5 / 12 ASP A 199
CYH A 424
GLU A 555
TRP A 645
TRP A 656
MVL  A1865 ( 2.9A)
EDO  A1876 (-3.3A)
MVL  A1865 (-2.6A)
MVL  A1865 (-3.7A)
MVL  A1865 (-3.7A)
1.18A 2vzsA-2vmfA:
30.3
2vzsA-2vmfA:
23.48
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2VZS_B_GCSB1903_1
(EXO-BETA-D-GLUCOSAMI
NIDASE)
2vmf BETA-MANNOSIDASE
(Bacteroides
thetaiotaomicron)
5 / 12 ASP A 199
CYH A 424
GLU A 555
TRP A 645
TRP A 656
MVL  A1865 ( 2.9A)
EDO  A1876 (-3.3A)
MVL  A1865 (-2.6A)
MVL  A1865 (-3.7A)
MVL  A1865 (-3.7A)
1.18A 2vzsB-2vmfA:
30.2
2vzsB-2vmfA:
23.48
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3AG1_J_CHDJ60_0
(CYTOCHROME C OXIDASE
POLYPEPTIDE 7A1)
2vmf BETA-MANNOSIDASE
(Bacteroides
thetaiotaomicron)
4 / 5 ARG A 216
MET A  34
THR A 214
LEU A  36
None
1.47A 3ag1J-2vmfA:
undetectable
3ag1J-2vmfA:
5.66
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3AIC_A_ACRA5044_2
(GLUCOSYLTRANSFERASE-
SI)
2vmf BETA-MANNOSIDASE
(Bacteroides
thetaiotaomicron)
3 / 3 LEU A 484
TRP A 470
TYR A 488
None
1.01A 3aicA-2vmfA:
0.9
3aicA-2vmfA:
21.23
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3AIC_B_ACRB5044_2
(GLUCOSYLTRANSFERASE-
SI)
2vmf BETA-MANNOSIDASE
(Bacteroides
thetaiotaomicron)
3 / 3 LEU A 484
TRP A 470
TYR A 488
None
0.99A 3aicB-2vmfA:
4.4
3aicB-2vmfA:
21.23
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3AIC_E_ACRE5044_2
(GLUCOSYLTRANSFERASE-
SI)
2vmf BETA-MANNOSIDASE
(Bacteroides
thetaiotaomicron)
3 / 3 LEU A 484
TRP A 470
TYR A 488
None
1.00A 3aicE-2vmfA:
4.7
3aicE-2vmfA:
21.23
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3AIC_H_ACRH5044_2
(GLUCOSYLTRANSFERASE-
SI)
2vmf BETA-MANNOSIDASE
(Bacteroides
thetaiotaomicron)
3 / 3 LEU A 484
TRP A 470
TYR A 488
None
1.00A 3aicH-2vmfA:
4.1
3aicH-2vmfA:
21.23
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3BC9_A_ACRA901_1
(ALPHA AMYLASE,
CATALYTIC REGION)
2vmf BETA-MANNOSIDASE
(Bacteroides
thetaiotaomicron)
4 / 7 ASP A 407
SER A 325
GLU A 323
ASP A  29
EDO  A1878 (-4.5A)
None
None
None
1.24A 3bc9A-2vmfA:
8.7
3bc9A-2vmfA:
21.55
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3BJW_E_SVRE510_2
(PHOSPHOLIPASE A2)
2vmf BETA-MANNOSIDASE
(Bacteroides
thetaiotaomicron)
4 / 6 LYS A 385
GLY A 359
ARG A 633
LEU A 629
None
1.01A 3bjwE-2vmfA:
undetectable
3bjwE-2vmfA:
9.34
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3BJW_F_SVRF509_3
(PHOSPHOLIPASE A2)
2vmf BETA-MANNOSIDASE
(Bacteroides
thetaiotaomicron)
4 / 7 LYS A 385
GLY A 359
ARG A 633
LEU A 629
None
0.86A 3bjwF-2vmfA:
undetectable
3bjwF-2vmfA:
9.34
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3F33_A_PFLA2001_1
(FERRITIN LIGHT CHAIN)
2vmf BETA-MANNOSIDASE
(Bacteroides
thetaiotaomicron)
4 / 6 LEU A 484
TYR A 488
LEU A 491
LEU A 467
None
0.80A 3f33A-2vmfA:
undetectable
3f33A-2vmfA:
12.49
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3MNO_A_DEXA784_1
(GLUCOCORTICOID
RECEPTOR)
2vmf BETA-MANNOSIDASE
(Bacteroides
thetaiotaomicron)
5 / 12 GLN A 623
VAL A 773
ARG A 626
LEU A 832
ILE A 856
BR  A1894 ( 4.8A)
None
BR  A1894 (-4.2A)
None
None
1.09A 3mnoA-2vmfA:
undetectable
3mnoA-2vmfA:
16.00
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3MNP_A_DEXA784_1
(GLUCOCORTICOID
RECEPTOR)
2vmf BETA-MANNOSIDASE
(Bacteroides
thetaiotaomicron)
5 / 12 GLN A 623
VAL A 773
ARG A 626
LEU A 832
ILE A 856
BR  A1894 ( 4.8A)
None
BR  A1894 (-4.2A)
None
None
1.06A 3mnpA-2vmfA:
undetectable
3mnpA-2vmfA:
15.64
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3PHA_A_ACRA701_2
(ALPHA-GLUCOSIDASE)
2vmf BETA-MANNOSIDASE
(Bacteroides
thetaiotaomicron)
4 / 5 PRO A 159
ILE A 160
TYR A 194
MET A 133
None
1.35A 3phaA-2vmfA:
2.9
3phaA-2vmfA:
22.52
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3WQW_A_GCSA502_1
(CHITINASE)
2vmf BETA-MANNOSIDASE
(Bacteroides
thetaiotaomicron)
4 / 5 TRP A 417
GLY A 641
ALA A 357
PHE A 508
None
1.19A 3wqwA-2vmfA:
4.1
3wqwA-2vmfA:
19.10
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4A97_A_ZPCA1318_1
(CYS-LOOP
LIGAND-GATED ION
CHANNEL)
2vmf BETA-MANNOSIDASE
(Bacteroides
thetaiotaomicron)
4 / 7 GLU A  90
PHE A 156
TYR A 153
HIS A 151
EDO  A1875 (-3.3A)
None
None
None
1.05A 4a97A-2vmfA:
3.4
4a97A-2vmfA:
17.23
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4A97_D_ZPCD1318_2
(CYS-LOOP
LIGAND-GATED ION
CHANNEL)
2vmf BETA-MANNOSIDASE
(Bacteroides
thetaiotaomicron)
4 / 7 GLU A  90
PHE A 156
TYR A 153
HIS A 151
EDO  A1875 (-3.3A)
None
None
None
1.03A 4a97D-2vmfA:
undetectable
4a97D-2vmfA:
17.23
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4A97_E_ZPCE1318_2
(CYS-LOOP
LIGAND-GATED ION
CHANNEL)
2vmf BETA-MANNOSIDASE
(Bacteroides
thetaiotaomicron)
4 / 6 GLU A  90
PHE A 156
TYR A 153
HIS A 151
EDO  A1875 (-3.3A)
None
None
None
1.08A 4a97E-2vmfA:
3.4
4a97E-2vmfA:
17.23
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4A97_J_ZPCJ1318_2
(CYS-LOOP
LIGAND-GATED ION
CHANNEL)
2vmf BETA-MANNOSIDASE
(Bacteroides
thetaiotaomicron)
4 / 5 GLU A  90
PHE A 156
TYR A 153
HIS A 151
EDO  A1875 (-3.3A)
None
None
None
1.02A 4a97J-2vmfA:
undetectable
4a97J-2vmfA:
17.23
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4BQF_A_QPSA951_1
(ALPHA-GLUCAN
PHOSPHORYLASE 2,
CYTOSOLIC)
2vmf BETA-MANNOSIDASE
(Bacteroides
thetaiotaomicron)
4 / 6 GLY A 398
ARG A 211
GLU A 440
ARG A 190
None
1.33A 4bqfA-2vmfA:
undetectable
4bqfA-2vmfA:
20.77
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4BQF_A_QPSA951_1
(ALPHA-GLUCAN
PHOSPHORYLASE 2,
CYTOSOLIC)
2vmf BETA-MANNOSIDASE
(Bacteroides
thetaiotaomicron)
4 / 6 GLY A 398
ARG A 447
GLU A 440
ARG A 190
None
1.20A 4bqfA-2vmfA:
undetectable
4bqfA-2vmfA:
20.77
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4D39_A_MTLA870_0
(NITRIC OXIDE
SYNTHASE,
ENDOTHELIAL)
2vmf BETA-MANNOSIDASE
(Bacteroides
thetaiotaomicron)
4 / 8 ARG A 296
ASN A 351
GLU A 349
ILE A 353
None
1.09A 4d39A-2vmfA:
undetectable
4d39A-2vmfA:
19.60
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4D39_B_MTLB870_0
(NITRIC OXIDE
SYNTHASE,
ENDOTHELIAL)
2vmf BETA-MANNOSIDASE
(Bacteroides
thetaiotaomicron)
4 / 7 ARG A 296
ASN A 351
GLU A 349
ILE A 353
None
1.10A 4d39B-2vmfA:
undetectable
4d39B-2vmfA:
19.60
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4F4D_A_CHDA504_0
(FERROCHELATASE,
MITOCHONDRIAL)
2vmf BETA-MANNOSIDASE
(Bacteroides
thetaiotaomicron)
5 / 12 LEU A 784
LEU A 809
LEU A 832
ILE A 859
ARG A 626
None
None
None
None
BR  A1894 (-4.2A)
1.29A 4f4dA-2vmfA:
undetectable
4f4dA-2vmfA:
17.37
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4G0V_D_MIXD101_1
(DNA TOPOISOMERASE
2-BETA)
2vmf BETA-MANNOSIDASE
(Bacteroides
thetaiotaomicron)
4 / 6 ARG A 551
GLY A 528
GLU A 344
MET A 391
None
None
EDO  A1872 ( 4.5A)
None
1.19A 4g0vB-2vmfA:
1.9
4g0vB-2vmfA:
21.39
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4I13_A_FOLA201_1
(DIHYDROFOLATE
REDUCTASE)
2vmf BETA-MANNOSIDASE
(Bacteroides
thetaiotaomicron)
3 / 3 ASP A 660
ARG A 823
THR A 566
None
0.51A 4i13A-2vmfA:
undetectable
4i13A-2vmfA:
11.14
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4IAQ_A_2GMA2001_1
(CHIMERA PROTEIN OF
HUMAN
5-HYDROXYTRYPTAMINE
RECEPTOR 1B AND E.
COLI SOLUBLE
CYTOCHROME B562)
2vmf BETA-MANNOSIDASE
(Bacteroides
thetaiotaomicron)
5 / 12 VAL A 187
ALA A 466
PHE A 476
PHE A 472
PHE A 172
None
1.37A 4iaqA-2vmfA:
undetectable
4iaqA-2vmfA:
18.14
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4MA7_A_P2ZA301_1
(MAJOR PRION PROTEIN)
2vmf BETA-MANNOSIDASE
(Bacteroides
thetaiotaomicron)
4 / 8 VAL A 141
LEU A 145
ILE A  96
THR A  93
None
0.87A 4ma7A-2vmfA:
undetectable
4ma7A-2vmfA:
9.00
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4ODO_B_FK5B203_2
(PEPTIDYL-PROLYL
CIS-TRANS ISOMERASE
SLYD)
2vmf BETA-MANNOSIDASE
(Bacteroides
thetaiotaomicron)
3 / 3 ALA A 571
GLN A 587
GLY A 592
None
0.49A 4odoC-2vmfA:
undetectable
4odoC-2vmfA:
10.62
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4OLT_A_GCSA306_1
(CHITOSANASE)
2vmf BETA-MANNOSIDASE
(Bacteroides
thetaiotaomicron)
3 / 3 SER A 589
ASP A 199
GLN A 646
None
MVL  A1865 ( 2.9A)
None
0.88A 4oltA-2vmfA:
undetectable
4oltB-2vmfA:
undetectable
4oltA-2vmfA:
14.69
4oltB-2vmfA:
14.69
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4P3R_A_FOLA201_1
(DIHYDROFOLATE
REDUCTASE)
2vmf BETA-MANNOSIDASE
(Bacteroides
thetaiotaomicron)
3 / 3 ASP A 660
ARG A 823
THR A 566
None
0.50A 4p3rA-2vmfA:
undetectable
4p3rA-2vmfA:
11.14
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4PFJ_A_ADNA502_2
(ADENOSYLHOMOCYSTEINA
SE)
2vmf BETA-MANNOSIDASE
(Bacteroides
thetaiotaomicron)
4 / 7 GLU A  90
THR A 206
HIS A  60
LEU A  63
EDO  A1875 (-3.3A)
None
None
None
1.15A 4pfjA-2vmfA:
undetectable
4pfjA-2vmfA:
19.78
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4PGF_A_ADNA502_1
(ADENOSYLHOMOCYSTEINA
SE)
2vmf BETA-MANNOSIDASE
(Bacteroides
thetaiotaomicron)
5 / 12 HIS A 511
ASP A 529
ASN A 460
GLY A 459
PHE A 508
EDO  A1872 (-4.6A)
None
None
None
None
1.48A 4pgfA-2vmfA:
undetectable
4pgfA-2vmfA:
19.78
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4QWP_B_GCSB304_1
(CHITOSANASE)
2vmf BETA-MANNOSIDASE
(Bacteroides
thetaiotaomicron)
3 / 3 GLN A 646
SER A 589
ASP A 199
None
None
MVL  A1865 ( 2.9A)
0.90A 4qwpA-2vmfA:
undetectable
4qwpB-2vmfA:
undetectable
4qwpA-2vmfA:
14.57
4qwpB-2vmfA:
14.57
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4U15_A_0HKA2001_2
(MUSCARINIC
ACETYLCHOLINE
RECEPTOR
M3,LYSOZYME,MUSCARIN
IC ACETYLCHOLINE
RECEPTOR M3)
2vmf BETA-MANNOSIDASE
(Bacteroides
thetaiotaomicron)
3 / 3 ASN A  77
PHE A 570
TYR A 661
CL  A1897 (-3.5A)
None
None
0.81A 4u15A-2vmfA:
undetectable
4u15A-2vmfA:
19.70
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4YBN_A_ACTA303_0
(FLAVIN-NUCLEOTIDE-BI
NDING PROTEIN)
2vmf BETA-MANNOSIDASE
(Bacteroides
thetaiotaomicron)
3 / 3 VAL A 416
TYR A 406
ALA A 409
None
0.55A 4ybnA-2vmfA:
undetectable
4ybnA-2vmfA:
14.05
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4YOA_A_017A100_1
(HIV-1 PROTEASE)
2vmf BETA-MANNOSIDASE
(Bacteroides
thetaiotaomicron)
4 / 6 ASN A 265
THR A 304
PRO A 305
THR A 306
None
EDO  A1896 (-3.6A)
None
EDO  A1896 (-3.5A)
1.09A 4yoaA-2vmfA:
undetectable
4yoaA-2vmfA:
7.47
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4ZZB_E_ACTE403_0
(PROTON-GATED ION
CHANNEL)
2vmf BETA-MANNOSIDASE
(Bacteroides
thetaiotaomicron)
3 / 3 ARG A 190
TYR A 400
GLU A 440
None
0.41A 4zzbE-2vmfA:
4.0
4zzbE-2vmfA:
17.42
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5DGR_A_GCSA602_1
(PUTATIVE
ENDOGLUCANASE-RELATE
D PROTEIN)
2vmf BETA-MANNOSIDASE
(Bacteroides
thetaiotaomicron)
5 / 12 TYR A 537
TRP A 656
TRP A 198
ASN A 461
GLU A 555
MVL  A1865 (-4.7A)
MVL  A1865 (-3.7A)
MVL  A1865 (-4.3A)
MVL  A1865 (-2.9A)
MVL  A1865 (-2.6A)
1.33A 5dgrA-2vmfA:
3.2
5dgrA-2vmfA:
21.68
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5DGR_B_GCSB602_1
(PUTATIVE
ENDOGLUCANASE-RELATE
D PROTEIN)
2vmf BETA-MANNOSIDASE
(Bacteroides
thetaiotaomicron)
5 / 11 TYR A 537
TRP A 656
TRP A 198
ASN A 461
GLU A 555
MVL  A1865 (-4.7A)
MVL  A1865 (-3.7A)
MVL  A1865 (-4.3A)
MVL  A1865 (-2.9A)
MVL  A1865 (-2.6A)
1.33A 5dgrB-2vmfA:
0.9
5dgrB-2vmfA:
21.68
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5HBS_A_RTLA201_1
(RETINOL-BINDING
PROTEIN 1)
2vmf BETA-MANNOSIDASE
(Bacteroides
thetaiotaomicron)
4 / 8 LEU A 114
LEU A 152
TYR A 155
TRP A  89
None
1.17A 5hbsA-2vmfA:
undetectable
5hbsA-2vmfA:
10.52
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5KIR_A_RCXA601_2
(PROSTAGLANDIN G/H
SYNTHASE 2)
2vmf BETA-MANNOSIDASE
(Bacteroides
thetaiotaomicron)
3 / 3 ARG A 216
ILE A 107
PHE A 217
None
0.70A 5kirA-2vmfA:
undetectable
5kirA-2vmfA:
21.50
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5W97_J_CHDJ101_1
(CYTOCHROME C OXIDASE
SUBUNIT 7A1,
MITOCHONDRIAL)
2vmf BETA-MANNOSIDASE
(Bacteroides
thetaiotaomicron)
4 / 5 ARG A 216
MET A  34
THR A 214
LEU A  36
None
1.37A 5w97J-2vmfA:
undetectable
5w97J-2vmfA:
5.66
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5X1B_W_CHDW101_0
(CYTOCHROME C OXIDASE
SUBUNIT 7A1,
MITOCHONDRIAL)
2vmf BETA-MANNOSIDASE
(Bacteroides
thetaiotaomicron)
4 / 5 ARG A 216
MET A  34
THR A 214
LEU A  36
None
1.35A 5x1bW-2vmfA:
undetectable
5x1bW-2vmfA:
5.66
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5X1F_W_CHDW101_0
(CYTOCHROME C OXIDASE
SUBUNIT 7A1,
MITOCHONDRIAL)
2vmf BETA-MANNOSIDASE
(Bacteroides
thetaiotaomicron)
4 / 5 ARG A 216
MET A  34
THR A 214
LEU A  36
None
1.25A 5x1fW-2vmfA:
undetectable
5x1fW-2vmfA:
5.66
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
6A4I_B_TRPB403_0
(TRYPTOPHAN
2,3-DIOXYGENASE)
2vmf BETA-MANNOSIDASE
(Bacteroides
thetaiotaomicron)
4 / 7 ARG A 382
GLU A 375
ARG A 823
PRO A 844
None
1.34A 6a4iB-2vmfA:
2.1
6a4iB-2vmfA:
19.50
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
6A5Y_D_9CRD501_1
(RETINOIC ACID
RECEPTOR RXR-ALPHA)
2vmf BETA-MANNOSIDASE
(Bacteroides
thetaiotaomicron)
3 / 3 ASN A  71
VAL A  84
HIS A  60
None
0.69A 6a5yD-2vmfA:
undetectable
6a5yD-2vmfA:
7.19
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
6EXI_A_ADNA502_0
(ADENOSYLHOMOCYSTEINA
SE)
2vmf BETA-MANNOSIDASE
(Bacteroides
thetaiotaomicron)
5 / 12 HIS A 511
ASP A 529
ASN A 460
GLY A 459
PHE A 508
EDO  A1872 (-4.6A)
None
None
None
None
1.36A 6exiA-2vmfA:
undetectable
6exiA-2vmfA:
7.65
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
6EXI_D_ADND502_0
(ADENOSYLHOMOCYSTEINA
SE)
2vmf BETA-MANNOSIDASE
(Bacteroides
thetaiotaomicron)
5 / 12 HIS A 511
ASP A 529
ASN A 460
GLY A 459
PHE A 508
EDO  A1872 (-4.6A)
None
None
None
None
1.38A 6exiD-2vmfA:
undetectable
6exiD-2vmfA:
7.65
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
6NKN_J_CHDJ102_0
(CYTOCHROME C OXIDASE
SUBUNIT 7A1,
MITOCHONDRIAL)
2vmf BETA-MANNOSIDASE
(Bacteroides
thetaiotaomicron)
4 / 5 ARG A 216
MET A  34
THR A 214
LEU A  36
None
1.39A 6nknJ-2vmfA:
undetectable
6nknJ-2vmfA:
5.66