SIMILAR PATTERN OF AMINO ACIDS MAPPED TO '2vvf'

List of Similar Pattern of Amino Acids

Hit pattern: 3D amino acid arrangements similar to known drug binding site
Query pattern: Residues from known binding site for annotated drug that match the hit pattern

(Click on the DrReposER ID to view details on interfaces and similar patterns of amino acids)
(Click on the view link on the last column to view superposed patterns of amino acids)
Filter list by:
DrReposER ID / Desc. Hit
PDBID		 Hit
Macromolecule		 Res.
Matches		 Interface HETATM RMSD Dali
Z-score		 Seq.
Identity (%)		 View Dock
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2YGQ_A_PCFA1275_0
(WNT INHIBITORY
FACTOR 1)		 2vvf MAJOR CAPSID PROTEIN
P2
(Pseudoalteromona
s
virus
PM2) 		5 / 12 ILE A 177
ILE A 246
PRO A 165
ILE A 172
PHE A 223
 None
 0.99A 2ygqA-2vvfA:
undetectable		 2ygqA-2vvfA:
20.18
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3CZH_A_D2VA602_2
(CYTOCHROME P450 2R1)		 2vvf MAJOR CAPSID PROTEIN
P2
(Pseudoalteromona
s
virus
PM2) 		3 / 3 LEU A 197
GLU A 160
ILE A 246
 None
 0.58A 3czhA-2vvfA:
undetectable		 3czhA-2vvfA:
20.25
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4A79_A_P1BA601_1
(AMINE OXIDASE
[FLAVIN-CONTAINING]
B)		 2vvf MAJOR CAPSID PROTEIN
P2
(Pseudoalteromona
s
virus
PM2) 		5 / 12 PRO A 141
LEU A  51
LEU A  23
ILE A  25
TYR A  29
 None
 1.34A 4a79A-2vvfA:
undetectable		 4a79A-2vvfA:
18.99
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4A79_B_P1BB601_1
(AMINE OXIDASE
[FLAVIN-CONTAINING]
B)		 2vvf MAJOR CAPSID PROTEIN
P2
(Pseudoalteromona
s
virus
PM2) 		5 / 12 PRO A 141
LEU A  51
LEU A  23
ILE A  25
TYR A  29
 None
 1.32A 4a79B-2vvfA:
undetectable		 4a79B-2vvfA:
18.99
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4Y0R_A_PX9A201_0
(BETA-LACTOGLOBULIN)		 2vvf MAJOR CAPSID PROTEIN
P2
(Pseudoalteromona
s
virus
PM2) 		5 / 12 LEU A  23
LEU A   7
ILE A  21
ILE A  10
PHE A  83
 None
 0.96A 4y0rA-2vvfA:
undetectable		 4y0rA-2vvfA:
20.25
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4Y0S_A_PX9A201_0
(BETA-LACTOGLOBULIN)		 2vvf MAJOR CAPSID PROTEIN
P2
(Pseudoalteromona
s
virus
PM2) 		5 / 12 VAL A  47
LEU A  23
LEU A   7
ILE A  21
PHE A  83
 None
 0.97A 4y0sA-2vvfA:
undetectable		 4y0sA-2vvfA:
20.58
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5MFX_A_ACTA701_0
(GENOME POLYPROTEIN)		 2vvf MAJOR CAPSID PROTEIN
P2
(Pseudoalteromona
s
virus
PM2) 		4 / 5 ARG A 195
THR A 220
ALA A 174
ASP A 222
 None
 1.25A 5mfxA-2vvfA:
undetectable		 5mfxA-2vvfA:
21.18