SIMILAR PATTERN OF AMINO ACIDS MAPPED TO '2wqp'

List of Similar Pattern of Amino Acids

Hit pattern: 3D amino acid arrangements similar to known drug binding site
Query pattern: Residues from known binding site for annotated drug that match the hit pattern

(Click on the DrReposER ID to view details on interfaces and similar patterns of amino acids)
(Click on the view link on the last column to view superposed patterns of amino acids)
Filter list by:
DrReposER ID / Desc. Hit
PDBID		 Hit
Macromolecule		 Res.
Matches		 Interface HETATM RMSD Dali
Z-score		 Seq.
Identity (%)		 View Dock
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1YA4_A_CTXA1_1
(CES1 PROTEIN)		 2wqp POLYSIALIC ACID
CAPSULE BIOSYNTHESIS
PROTEIN SIAC
(Neisseria
meningitidis) 		5 / 12 ALA A  37
GLY A  27
LEU A  88
LEU A 120
HIS A  57
 None
 0.94A 1ya4A-2wqpA:
undetectable		 1ya4A-2wqpA:
21.67
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2BR4_E_SAME301_1
(CEPHALOSPORIN
HYDROXYLASE CMCI)		 2wqp POLYSIALIC ACID
CAPSULE BIOSYNTHESIS
PROTEIN SIAC
(Neisseria
meningitidis) 		3 / 3 SER A 154
ASP A 214
CYH A 250
 WQP  A1350 (-2.5A)
None
None
 1.16A 2br4E-2wqpA:
undetectable		 2br4E-2wqpA:
21.49
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2J9D_E_ACTE1116_0
(HYPOTHETICAL
NITROGEN REGULATORY
PII-LIKE PROTEIN
MJ0059)		 2wqp POLYSIALIC ACID
CAPSULE BIOSYNTHESIS
PROTEIN SIAC
(Neisseria
meningitidis) 		5 / 10 ILE A 152
GLU A 234
GLU A  25
ILE A  23
ILE A 108
 None
WQP  A1350 ( 4.1A)
WQP  A1350 (-4.1A)
None
None
 1.07A 2j9dD-2wqpA:
0.0
2j9dE-2wqpA:
0.0
2j9dF-2wqpA:
0.0		 2j9dD-2wqpA:
16.81
2j9dE-2wqpA:
16.81
2j9dF-2wqpA:
16.81
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2O5Y_H_STRH249_1
(CHIMERIC ANTIBODY
FAB 1E9-DB3)		 2wqp POLYSIALIC ACID
CAPSULE BIOSYNTHESIS
PROTEIN SIAC
(Neisseria
meningitidis) 		4 / 7 ASN A 184
GLY A 156
THR A 155
MET A 157
 WQP  A1350 (-3.5A)
None
None
None
 1.04A 2o5yH-2wqpA:
undetectable
2o5yL-2wqpA:
undetectable		 2o5yH-2wqpA:
21.33
2o5yL-2wqpA:
21.07
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2XKW_A_P1BA1478_1
(PEROXISOME
PROLIFERATOR-ACTIVAT
ED RECEPTOR GAMMA)		 2wqp POLYSIALIC ACID
CAPSULE BIOSYNTHESIS
PROTEIN SIAC
(Neisseria
meningitidis) 		5 / 12 PHE A 112
SER A 132
LEU A 180
ILE A 151
TYR A 186
 WQP  A1350 (-4.6A)
WQP  A1350 (-2.7A)
None
None
WQP  A1350 (-3.9A)
 1.48A 2xkwA-2wqpA:
undetectable		 2xkwA-2wqpA:
21.58
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2Z0Y_B_SAMB400_0
(PUTATIVE
UNCHARACTERIZED
PROTEIN TTHA0657)		 2wqp POLYSIALIC ACID
CAPSULE BIOSYNTHESIS
PROTEIN SIAC
(Neisseria
meningitidis) 		5 / 9 VAL A 226
GLY A 230
GLY A 211
LEU A 260
ILE A  23
 None
ACT  A1352 (-4.0A)
None
None
None
 0.89A 2z0yB-2wqpA:
undetectable		 2z0yB-2wqpA:
22.29
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3MWS_B_017B201_1
(HIV-1 PROTEASE)		 2wqp POLYSIALIC ACID
CAPSULE BIOSYNTHESIS
PROTEIN SIAC
(Neisseria
meningitidis) 		5 / 12 GLY A 302
ALA A 333
ASP A 347
GLY A 330
ILE A 299
 None
 1.07A 3mwsA-2wqpA:
undetectable		 3mwsA-2wqpA:
13.75
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3NU3_B_478B401_1
(PROTEASE)		 2wqp POLYSIALIC ACID
CAPSULE BIOSYNTHESIS
PROTEIN SIAC
(Neisseria
meningitidis) 		5 / 12 GLY A 302
ALA A 333
ASP A 347
GLY A 330
ILE A 299
 None
 1.05A 3nu3A-2wqpA:
undetectable		 3nu3A-2wqpA:
16.91
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3SUD_A_SUEA1201_2
(NS3 PROTEASE, NS4A
PROTEIN)		 2wqp POLYSIALIC ACID
CAPSULE BIOSYNTHESIS
PROTEIN SIAC
(Neisseria
meningitidis) 		4 / 4 PHE A 237
TYR A  45
ILE A 232
LEU A 233
 None
 1.19A 3sudA-2wqpA:
undetectable		 3sudA-2wqpA:
20.53
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3SUE_C_SUEC1201_2
(NS3 PROTEASE, NS4A
PROTEIN)		 2wqp POLYSIALIC ACID
CAPSULE BIOSYNTHESIS
PROTEIN SIAC
(Neisseria
meningitidis) 		4 / 5 PHE A 237
TYR A  45
ILE A 232
LEU A 233
 None
 1.21A 3sueC-2wqpA:
undetectable		 3sueC-2wqpA:
20.23
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4BLV_A_SAMA1281_1
(RIBOSOMAL RNA LARGE
SUBUNIT
METHYLTRANSFERASE J)		 2wqp POLYSIALIC ACID
CAPSULE BIOSYNTHESIS
PROTEIN SIAC
(Neisseria
meningitidis) 		4 / 6 HIS A 215
SER A 251
ASP A  76
ASP A 247
 MN  A1351 ( 3.3A)
None
EDO  A1356 (-4.4A)
WQP  A1350 (-2.8A)
 1.39A 4blvA-2wqpA:
undetectable		 4blvA-2wqpA:
21.24
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4P68_A_MTXA201_1
(DIHYDROFOLATE
REDUCTASE)		 2wqp POLYSIALIC ACID
CAPSULE BIOSYNTHESIS
PROTEIN SIAC
(Neisseria
meningitidis) 		5 / 11 ILE A 106
LYS A  53
SER A 231
ILE A 232
ILE A   9
 None
WQP  A1350 (-3.2A)
None
None
None
 1.49A 4p68A-2wqpA:
undetectable		 4p68A-2wqpA:
18.37
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4Y0Q_A_PX9A201_1
(BETA-LACTOGLOBULIN)		 2wqp POLYSIALIC ACID
CAPSULE BIOSYNTHESIS
PROTEIN SIAC
(Neisseria
meningitidis) 		3 / 3 LYS A  53
ILE A  23
ILE A 232
 WQP  A1350 (-3.2A)
None
None
 0.73A 4y0qA-2wqpA:
undetectable		 4y0qA-2wqpA:
18.69
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5FHZ_C_REAC602_1
(ALDEHYDE
DEHYDROGENASE FAMILY
1 MEMBER A3)		 2wqp POLYSIALIC ACID
CAPSULE BIOSYNTHESIS
PROTEIN SIAC
(Neisseria
meningitidis) 		5 / 10 ILE A 209
GLY A 211
LEU A 180
PHE A   7
LEU A  21
 None
 1.05A 5fhzC-2wqpA:
undetectable		 5fhzC-2wqpA:
22.90
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5K4P_A_SORA611_0
(PROBABLE
PHOSPHATIDYLETHANOLA
MINE TRANSFERASE
MCR-1)		 2wqp POLYSIALIC ACID
CAPSULE BIOSYNTHESIS
PROTEIN SIAC
(Neisseria
meningitidis) 		4 / 6 GLY A 156
SER A 154
GLY A 131
ASN A 184
 None
WQP  A1350 (-2.5A)
WQP  A1350 ( 3.8A)
WQP  A1350 (-3.5A)
 0.87A 5k4pA-2wqpA:
undetectable		 5k4pA-2wqpA:
20.36
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
6MD4_A_BRLA501_0
(PEROXISOME
PROLIFERATOR-ACTIVAT
ED RECEPTOR GAMMA)		 2wqp POLYSIALIC ACID
CAPSULE BIOSYNTHESIS
PROTEIN SIAC
(Neisseria
meningitidis) 		5 / 12 PHE A 112
SER A 132
LEU A 180
ILE A 151
TYR A 186
 WQP  A1350 (-4.6A)
WQP  A1350 (-2.7A)
None
None
WQP  A1350 (-3.9A)
 1.44A 6md4A-2wqpA:
undetectable		 6md4A-2wqpA:
13.79