SIMILAR PATTERN OF AMINO ACIDS MAPPED TO '2xi1'

List of Similar Pattern of Amino Acids

Hit pattern: 3D amino acid arrangements similar to known drug binding site
Query pattern: Residues from known binding site for annotated drug that match the hit pattern

(Click on the DrReposER ID to view details on interfaces and similar patterns of amino acids)
(Click on the view link on the last column to view superposed patterns of amino acids)

Filter list by:

	DrReposER ID / Desc.	Hit PDBID	Hit Macromolecule	Res. Matches	Interface	HETATM	RMSD	Dali Z-score	Seq. Identity (%)
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.	3SI7_C_ACTC4_0 (CYSTIC FIBROSIS TRANSMEMBRANE CONDUCTANCE REGULATOR)	2xi1	NEF (Human immunodeficiency virus 1)	4 / 4	GLY A 132 GLY A 130 THR A 128 LEU A 198	None	0.73A	3si7C-2xi1A: undetectable 3si7D-2xi1A: undetectable	3si7C-2xi1A: 18.34 3si7D-2xi1A: 18.34
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.	3SI7_D_ACTD4_0 (CYSTIC FIBROSIS TRANSMEMBRANE CONDUCTANCE REGULATOR)	2xi1	NEF (Human immunodeficiency virus 1)	4 / 5	LEU A 198 GLY A 132 GLY A 130 THR A 128	None	0.71A	3si7C-2xi1A: undetectable 3si7D-2xi1A: undetectable	3si7C-2xi1A: 18.34 3si7D-2xi1A: 18.34
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.	6G31_D_ZOLD401_0 (GERANYLGERANYL PYROPHOSPHATE SYNTHASE)	2xi1	NEF (Human immunodeficiency virus 1)	4 / 7	LEU A 112 ASP A 111 GLN A 125 GLN A 104	None	1.37A	6g31D-2xi1A: undetectable	6g31D-2xi1A: 18.50
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.	6G31_J_ZOLJ401_0 (GERANYLGERANYL PYROPHOSPHATE SYNTHASE)	2xi1	NEF (Human immunodeficiency virus 1)	4 / 6	LEU A 112 ASP A 111 GLN A 125 GLN A 104	None	1.33A	6g31J-2xi1A: undetectable	6g31J-2xi1A: 18.50

[["DrReposER ID","Desc.","Hit PDB","Hit molecule","Hit organism","Res. no.","Interface","HETATM","RMSD","Z-score","Seq ID"],["3SI7_C_ACTC4_0","CYSTIC FIBROSIS TRANSMEMBRANE CONDUCTANCE REGULATOR","2xi1","NEF","Human immunodeficiency virus 1",4,"GLY A 132;GLY A 130;THR A 128;LEU A 198","None","0.73A","3si7C-2xi1A:undetectable;3si7D-2xi1A:undetectable","3si7C-2xi1A:18.34;3si7D-2xi1A:18.34"],["3SI7_D_ACTD4_0","CYSTIC FIBROSIS TRANSMEMBRANE CONDUCTANCE REGULATOR","2xi1","NEF","Human immunodeficiency virus 1",4,"LEU A 198;GLY A 132;GLY A 130;THR A 128","None","0.71A","3si7C-2xi1A:undetectable;3si7D-2xi1A:undetectable","3si7C-2xi1A:18.34;3si7D-2xi1A:18.34"],["6G31_D_ZOLD401_0","GERANYLGERANYL PYROPHOSPHATE SYNTHASE","2xi1","NEF","Human immunodeficiency virus 1",4,"LEU A 112;ASP A 111;GLN A 125;GLN A 104","None","1.37A","6g31D-2xi1A:undetectable","6g31D-2xi1A:18.50"],["6G31_J_ZOLJ401_0","GERANYLGERANYL PYROPHOSPHATE SYNTHASE","2xi1","NEF","Human immunodeficiency virus 1",4,"LEU A 112;ASP A 111;GLN A 125;GLN A 104","None","1.33A","6g31J-2xi1A:undetectable","6g31J-2xi1A:18.50"]]