SIMILAR PATTERN OF AMINO ACIDS MAPPED TO '2yb6'

List of Similar Pattern of Amino Acids

Hit pattern: 3D amino acid arrangements similar to known drug binding site

Query pattern: Residues from known binding site for annotated drug that match the hit pattern


(Click on the DrReposER ID to view details on interfaces and similar patterns of amino acids)
(Click on the view link on the last column to view superposed patterns of amino acids)
Filter list by:
DrReposER ID / Desc. Hit
PDBID
Hit
Macromolecule
Res.
Matches
Interface HETATM RMSD Dali
Z-score
Seq.
Identity (%)
View Dock
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1C6Y_B_MK1B524_2
(PROTEIN (PROTEASE))
2yb6 UBIQUITIN-CONJUGATIN
G ENZYME E2 B

(Homo
sapiens)
5 / 12 GLY A  26
ALA A  38
VAL A  70
ILE A 109
ILE A  57
None
0.87A 1c6yB-2yb6A:
undetectable
1c6yB-2yb6A:
18.71
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1C6Z_B_ROCB505_1
(PROTEIN (PROTEASE))
2yb6 UBIQUITIN-CONJUGATIN
G ENZYME E2 B

(Homo
sapiens)
5 / 12 GLY A  26
ALA A  38
VAL A  70
ILE A 109
ILE A  57
None
0.89A 1c6zA-2yb6A:
undetectable
1c6zA-2yb6A:
18.71
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1C6Z_B_ROCB505_2
(PROTEIN (PROTEASE))
2yb6 UBIQUITIN-CONJUGATIN
G ENZYME E2 B

(Homo
sapiens)
5 / 12 GLY A  26
ALA A  38
VAL A  70
ILE A 109
ILE A  57
None
0.91A 1c6zB-2yb6A:
undetectable
1c6zB-2yb6A:
18.71
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1HSG_B_MK1B902_2
(HIV-1 PROTEASE)
2yb6 UBIQUITIN-CONJUGATIN
G ENZYME E2 B

(Homo
sapiens)
5 / 12 GLY A  26
ALA A  38
VAL A  70
ILE A 109
ILE A  57
None
0.83A 1hsgB-2yb6A:
undetectable
1hsgB-2yb6A:
19.23
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1N49_B_RITB301_2
(PROTEASE)
2yb6 UBIQUITIN-CONJUGATIN
G ENZYME E2 B

(Homo
sapiens)
5 / 11 GLY A  26
ALA A  38
VAL A  70
ILE A 109
ILE A  57
None
0.85A 1n49B-2yb6A:
undetectable
1n49B-2yb6A:
17.76
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1N49_D_RITD401_1
(PROTEASE)
2yb6 UBIQUITIN-CONJUGATIN
G ENZYME E2 B

(Homo
sapiens)
5 / 11 GLY A  26
ALA A  38
VAL A  70
ILE A 109
ILE A  57
None
0.82A 1n49C-2yb6A:
undetectable
1n49C-2yb6A:
17.76
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1SDT_B_MK1B902_2
(PROTEASE RETROPEPSIN)
2yb6 UBIQUITIN-CONJUGATIN
G ENZYME E2 B

(Homo
sapiens)
5 / 12 GLY A  26
ALA A  38
VAL A  70
ILE A 109
ILE A  57
None
0.86A 1sdtB-2yb6A:
undetectable
1sdtB-2yb6A:
19.75
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1SDV_B_MK1B902_2
(PROTEASE RETROPEPSIN)
2yb6 UBIQUITIN-CONJUGATIN
G ENZYME E2 B

(Homo
sapiens)
5 / 11 GLY A  26
ALA A  38
VAL A  70
ILE A 109
ILE A  57
None
0.86A 1sdvB-2yb6A:
undetectable
1sdvB-2yb6A:
20.38
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2AVO_B_MK1B902_2
(POL POLYPROTEIN)
2yb6 UBIQUITIN-CONJUGATIN
G ENZYME E2 B

(Homo
sapiens)
5 / 12 GLY A  26
ALA A  38
VAL A  70
ILE A 109
ILE A  57
None
0.87A 2avoB-2yb6A:
undetectable
2avoB-2yb6A:
19.75
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2AVS_B_MK1B902_1
(POL POLYPROTEIN)
2yb6 UBIQUITIN-CONJUGATIN
G ENZYME E2 B

(Homo
sapiens)
5 / 12 GLY A  26
ALA A  38
VAL A  70
ILE A 109
ILE A  57
None
0.84A 2avsA-2yb6A:
undetectable
2avsA-2yb6A:
19.75
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2AVS_B_MK1B902_3
(POL POLYPROTEIN)
2yb6 UBIQUITIN-CONJUGATIN
G ENZYME E2 B

(Homo
sapiens)
5 / 12 GLY A  26
ALA A  38
VAL A  70
ILE A 109
ILE A  57
None
0.89A 2avsB-2yb6A:
undetectable
2avsB-2yb6A:
19.75
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2AVV_A_MK1A901_3
(POL POLYPROTEIN)
2yb6 UBIQUITIN-CONJUGATIN
G ENZYME E2 B

(Homo
sapiens)
5 / 12 GLY A  26
ALA A  38
VAL A  70
ILE A 109
ILE A  57
None
0.80A 2avvB-2yb6A:
undetectable
2avvB-2yb6A:
19.75
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2AVV_E_MK1E902_1
(POL POLYPROTEIN)
2yb6 UBIQUITIN-CONJUGATIN
G ENZYME E2 B

(Homo
sapiens)
5 / 12 GLY A  26
ALA A  38
VAL A  70
ILE A 109
ILE A  57
None
0.80A 2avvD-2yb6A:
undetectable
2avvD-2yb6A:
19.75
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2BPX_B_MK1B902_2
(HIV-1 PROTEASE)
2yb6 UBIQUITIN-CONJUGATIN
G ENZYME E2 B

(Homo
sapiens)
5 / 12 GLY A  26
ALA A  38
VAL A  70
ILE A 109
ILE A  57
None
0.86A 2bpxB-2yb6A:
undetectable
2bpxB-2yb6A:
19.23
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2F8G_B_017B401_2
(POL POLYPROTEIN)
2yb6 UBIQUITIN-CONJUGATIN
G ENZYME E2 B

(Homo
sapiens)
5 / 12 GLY A  26
ALA A  38
VAL A  70
ILE A 109
ILE A  57
None
0.87A 2f8gB-2yb6A:
undetectable
2f8gB-2yb6A:
19.75
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2O4K_A_DR7A301_2
(PROTEASE)
2yb6 UBIQUITIN-CONJUGATIN
G ENZYME E2 B

(Homo
sapiens)
5 / 12 GLY A  26
ALA A  38
VAL A  70
ILE A 109
ILE A  57
None
0.78A 2o4kB-2yb6A:
undetectable
2o4kB-2yb6A:
19.23
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2O4L_A_TPVA403_2
(PROTEASE)
2yb6 UBIQUITIN-CONJUGATIN
G ENZYME E2 B

(Homo
sapiens)
5 / 12 GLY A  26
ALA A  38
VAL A  70
ILE A 109
ILE A  57
None
0.81A 2o4lB-2yb6A:
undetectable
2o4lB-2yb6A:
19.23
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2O4S_A_AB1A400_1
(PROTEASE)
2yb6 UBIQUITIN-CONJUGATIN
G ENZYME E2 B

(Homo
sapiens)
5 / 12 GLY A  26
ALA A  38
VAL A  70
ILE A 109
ILE A  57
None
0.80A 2o4sA-2yb6A:
undetectable
2o4sA-2yb6A:
19.23
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2Q63_A_1UNA1001_1
(PROTEASE RETROPEPSIN)
2yb6 UBIQUITIN-CONJUGATIN
G ENZYME E2 B

(Homo
sapiens)
5 / 12 GLY A  26
ALA A  38
VAL A  70
ILE A 109
ILE A  57
None
0.85A 2q63A-2yb6A:
undetectable
2q63A-2yb6A:
19.23
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2Q63_A_1UNA1001_3
(PROTEASE RETROPEPSIN)
2yb6 UBIQUITIN-CONJUGATIN
G ENZYME E2 B

(Homo
sapiens)
5 / 12 GLY A  26
ALA A  38
VAL A  70
ILE A 109
ILE A  57
None
0.85A 2q63B-2yb6A:
undetectable
2q63B-2yb6A:
19.23
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2Q64_B_1UNB1001_1
(PROTEASE RETROPEPSIN)
2yb6 UBIQUITIN-CONJUGATIN
G ENZYME E2 B

(Homo
sapiens)
5 / 12 GLY A  26
ALA A  38
VAL A  70
ILE A 109
ILE A  57
None
0.82A 2q64A-2yb6A:
undetectable
2q64A-2yb6A:
19.23
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2Q64_B_1UNB1001_3
(PROTEASE RETROPEPSIN)
2yb6 UBIQUITIN-CONJUGATIN
G ENZYME E2 B

(Homo
sapiens)
5 / 12 GLY A  26
ALA A  38
VAL A  70
ILE A 109
ILE A  57
None
0.81A 2q64B-2yb6A:
undetectable
2q64B-2yb6A:
19.23
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2QAK_A_1UNA1001_1
(PROTEASE RETROPEPSIN)
2yb6 UBIQUITIN-CONJUGATIN
G ENZYME E2 B

(Homo
sapiens)
5 / 12 GLY A  26
ALA A  38
VAL A  70
ILE A 109
ILE A  57
None
0.81A 2qakA-2yb6A:
undetectable
2qakA-2yb6A:
19.23
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2R5P_B_MK1B902_2
(PROTEASE)
2yb6 UBIQUITIN-CONJUGATIN
G ENZYME E2 B

(Homo
sapiens)
5 / 12 GLY A  26
ALA A  38
VAL A  70
ILE A 109
ILE A  57
None
0.85A 2r5pB-2yb6A:
undetectable
2r5pB-2yb6A:
19.75
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2V32_D_BEZD1221_0
(PEROXIREDOXIN 6)
2yb6 UBIQUITIN-CONJUGATIN
G ENZYME E2 B

(Homo
sapiens)
4 / 8 VAL A  22
PRO A  21
THR A 107
SER A 111
None
1.00A 2v32C-2yb6A:
undetectable
2v32D-2yb6A:
undetectable
2v32C-2yb6A:
18.86
2v32D-2yb6A:
18.86
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3BVB_B_017B401_1
(PROTEASE
(RETROPEPSIN))
2yb6 UBIQUITIN-CONJUGATIN
G ENZYME E2 B

(Homo
sapiens)
5 / 12 GLY A  26
ALA A  38
VAL A  70
ILE A 109
ILE A  57
None
0.76A 3bvbA-2yb6A:
undetectable
3bvbA-2yb6A:
19.75
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3D1Z_B_017B201_1
(HIV-1 PROTEASE)
2yb6 UBIQUITIN-CONJUGATIN
G ENZYME E2 B

(Homo
sapiens)
5 / 12 GLY A  26
ALA A  38
VAL A  70
ILE A 109
ILE A  57
None
0.83A 3d1zA-2yb6A:
undetectable
3d1zA-2yb6A:
19.11
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3EKP_C_478C200_2
(PROTEASE)
2yb6 UBIQUITIN-CONJUGATIN
G ENZYME E2 B

(Homo
sapiens)
5 / 10 GLY A  26
ALA A  38
VAL A  70
ILE A 109
ILE A  57
None
0.84A 3ekpD-2yb6A:
undetectable
3ekpD-2yb6A:
19.74
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3EL1_A_DR7A100_2
(PROTEASE)
2yb6 UBIQUITIN-CONJUGATIN
G ENZYME E2 B

(Homo
sapiens)
5 / 12 GLY A  26
ALA A  38
VAL A  70
ILE A 109
ILE A  57
None
0.80A 3el1B-2yb6A:
undetectable
3el1B-2yb6A:
17.11
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3JVY_B_017B401_2
(GAG-POL POLYPROTEIN)
2yb6 UBIQUITIN-CONJUGATIN
G ENZYME E2 B

(Homo
sapiens)
5 / 12 GLY A  26
ALA A  38
VAL A  70
ILE A 109
ILE A  57
None
0.80A 3jvyB-2yb6A:
undetectable
3jvyB-2yb6A:
20.38
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3JW2_A_017A401_2
(GAG-POL POLYPROTEIN)
2yb6 UBIQUITIN-CONJUGATIN
G ENZYME E2 B

(Homo
sapiens)
5 / 12 GLY A  26
ALA A  38
VAL A  70
ILE A 109
ILE A  57
None
0.84A 3jw2B-2yb6A:
undetectable
3jw2B-2yb6A:
20.38
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3K4V_B_ROCB201_3
(HIV-1 PROTEASE)
2yb6 UBIQUITIN-CONJUGATIN
G ENZYME E2 B

(Homo
sapiens)
5 / 12 GLY A  26
ALA A  38
VAL A  70
ILE A 109
ILE A  57
None
0.83A 3k4vB-2yb6A:
undetectable
3k4vB-2yb6A:
19.62
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3NU5_B_478B401_1
(PROTEASE)
2yb6 UBIQUITIN-CONJUGATIN
G ENZYME E2 B

(Homo
sapiens)
5 / 12 GLY A  26
ALA A  38
VAL A  70
ILE A 109
ILE A  57
None
0.82A 3nu5A-2yb6A:
undetectable
3nu5A-2yb6A:
19.75
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3NU5_B_478B401_2
(PROTEASE)
2yb6 UBIQUITIN-CONJUGATIN
G ENZYME E2 B

(Homo
sapiens)
5 / 12 GLY A  26
ALA A  38
VAL A  70
ILE A 109
ILE A  57
None
0.83A 3nu5B-2yb6A:
undetectable
3nu5B-2yb6A:
19.75
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3OXC_A_ROCA401_1
(PROTEASE)
2yb6 UBIQUITIN-CONJUGATIN
G ENZYME E2 B

(Homo
sapiens)
5 / 12 GLY A  26
ALA A  38
VAL A  70
ILE A 109
ILE A  57
None
0.85A 3oxcA-2yb6A:
undetectable
3oxcA-2yb6A:
19.75
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3OXX_A_DR7A100_1
(HIV-1 PROTEASE)
2yb6 UBIQUITIN-CONJUGATIN
G ENZYME E2 B

(Homo
sapiens)
5 / 12 GLY A  26
ALA A  38
VAL A  70
ILE A 109
ILE A  57
None
0.81A 3oxxA-2yb6A:
undetectable
3oxxA-2yb6A:
18.01
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3PWR_A_ROCA401_3
(PROTEASE)
2yb6 UBIQUITIN-CONJUGATIN
G ENZYME E2 B

(Homo
sapiens)
5 / 12 GLY A  26
ALA A  38
VAL A  70
ILE A 109
ILE A  57
None
0.80A 3pwrB-2yb6A:
undetectable
3pwrB-2yb6A:
19.11
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3TGV_B_BEZB1_0
(HEME-BINDING PROTEIN
HUTZ)
2yb6 UBIQUITIN-CONJUGATIN
G ENZYME E2 B

(Homo
sapiens)
4 / 6 TYR A 137
PHE A  48
PRO A  47
LEU A 113
None
1.29A 3tgvB-2yb6A:
undetectable
3tgvB-2yb6A:
18.79
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3TGV_D_BEZD1_0
(HEME-BINDING PROTEIN
HUTZ)
2yb6 UBIQUITIN-CONJUGATIN
G ENZYME E2 B

(Homo
sapiens)
4 / 6 TYR A 137
PHE A  48
PRO A  47
LEU A 113
None
1.41A 3tgvD-2yb6A:
undetectable
3tgvD-2yb6A:
18.79
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3TKG_C_ROCC901_2
(PROTEASE)
2yb6 UBIQUITIN-CONJUGATIN
G ENZYME E2 B

(Homo
sapiens)
5 / 12 GLY A  26
ALA A  38
VAL A  70
ILE A 109
ILE A  57
None
0.91A 3tkgD-2yb6A:
undetectable
3tkgD-2yb6A:
21.02
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3TKW_B_017B401_2
(PROTEASE)
2yb6 UBIQUITIN-CONJUGATIN
G ENZYME E2 B

(Homo
sapiens)
5 / 12 GLY A  26
ALA A  38
VAL A  70
ILE A 109
ILE A  57
None
0.83A 3tkwB-2yb6A:
undetectable
3tkwB-2yb6A:
21.02
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3TL9_A_ROCA401_3
(PROTEASE)
2yb6 UBIQUITIN-CONJUGATIN
G ENZYME E2 B

(Homo
sapiens)
5 / 12 GLY A  26
ALA A  38
VAL A  70
ILE A 109
ILE A  57
None
0.85A 3tl9B-2yb6A:
undetectable
3tl9B-2yb6A:
21.02
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4JEC_B_478B401_2
(HIV-1 PROTEASE)
2yb6 UBIQUITIN-CONJUGATIN
G ENZYME E2 B

(Homo
sapiens)
5 / 12 GLY A  26
ALA A  38
VAL A  70
ILE A 109
ILE A  57
None
0.83A 4jecB-2yb6A:
undetectable
4jecB-2yb6A:
19.75
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4NJV_D_RITD500_2
(PROTEASE)
2yb6 UBIQUITIN-CONJUGATIN
G ENZYME E2 B

(Homo
sapiens)
5 / 12 GLY A  26
ALA A  38
VAL A  70
ILE A 109
ILE A  57
None
0.77A 4njvD-2yb6A:
undetectable
4njvD-2yb6A:
17.95
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5GTR_A_ESTA601_2
(ESTROGEN RECEPTOR)
2yb6 UBIQUITIN-CONJUGATIN
G ENZYME E2 B

(Homo
sapiens)
4 / 5 LEU A  55
LEU A  92
PHE A  72
LEU A 112
None
0.94A 5gtrA-2yb6A:
undetectable
5gtrA-2yb6A:
21.19
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
6B89_A_NOVA403_2
(LIPOPOLYSACCHARIDE
EXPORT SYSTEM
ATP-BINDING PROTEIN
LPTB)
2yb6 UBIQUITIN-CONJUGATIN
G ENZYME E2 B

(Homo
sapiens)
4 / 6 ARG A   8
ARG A  15
LEU A  16
ALA A  38
None
1.06A 6b89B-2yb6A:
undetectable
6b89B-2yb6A:
22.82
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
6DH3_A_017A101_1
(PROTEASE)
2yb6 UBIQUITIN-CONJUGATIN
G ENZYME E2 B

(Homo
sapiens)
5 / 12 GLY A  26
ALA A  38
VAL A  70
ILE A 109
ILE A  57
None
0.80A 6dh3B-2yb6A:
undetectable
6dh3B-2yb6A:
18.30
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
6DH6_A_017A104_0
(PROTEASE)
2yb6 UBIQUITIN-CONJUGATIN
G ENZYME E2 B

(Homo
sapiens)
5 / 12 GLY A  26
ALA A  38
VAL A  70
ILE A 109
ILE A  57
None
0.91A 6dh6A-2yb6A:
undetectable
6dh6A-2yb6A:
18.30
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
6DH6_A_017A104_1
(PROTEASE)
2yb6 UBIQUITIN-CONJUGATIN
G ENZYME E2 B

(Homo
sapiens)
5 / 12 GLY A  26
ALA A  38
VAL A  70
ILE A 109
ILE A  57
None
0.80A 6dh6B-2yb6A:
undetectable
6dh6B-2yb6A:
18.30
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
6DIF_B_TPVB201_1
(HIV-1 PROTEASE)
2yb6 UBIQUITIN-CONJUGATIN
G ENZYME E2 B

(Homo
sapiens)
5 / 12 GLY A  26
ALA A  38
VAL A  70
ILE A 109
ILE A  57
None
0.80A 6difB-2yb6A:
undetectable
6difB-2yb6A:
18.18
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
6DIL_B_TPVB201_1
(HIV-1 PROTEASE)
2yb6 UBIQUITIN-CONJUGATIN
G ENZYME E2 B

(Homo
sapiens)
5 / 12 GLY A  26
ALA A  38
VAL A  70
ILE A 109
ILE A  57
None
0.79A 6dilB-2yb6A:
undetectable
6dilB-2yb6A:
18.18