SIMILAR PATTERN OF AMINO ACIDS MAPPED TO '3ak4'

List of Similar Pattern of Amino Acids

Hit pattern: 3D amino acid arrangements similar to known drug binding site
Query pattern: Residues from known binding site for annotated drug that match the hit pattern

(Click on the DrReposER ID to view details on interfaces and similar patterns of amino acids)
(Click on the view link on the last column to view superposed patterns of amino acids)
Filter list by:
DrReposER ID / Desc. Hit
PDBID		 Hit
Macromolecule		 Res.
Matches		 Interface HETATM RMSD Dali
Z-score		 Seq.
Identity (%)		 View Dock
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1E7B_A_HLTA4002_1
(SERUM ALBUMIN)		 3ak4 NADH-DEPENDENT
QUINUCLIDINONE
REDUCTASE
(Agrobacterium
tumefaciens) 		4 / 4 ARG A 205
ALA A 202
ALA A 211
GLU A 215
 None
 1.14A 1e7bA-3ak4A:
undetectable		 1e7bA-3ak4A:
20.43
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1E7B_B_HLTB4002_1
(SERUM ALBUMIN)		 3ak4 NADH-DEPENDENT
QUINUCLIDINONE
REDUCTASE
(Agrobacterium
tumefaciens) 		4 / 4 ARG A 205
ALA A 202
ALA A 211
GLU A 215
 None
 1.16A 1e7bB-3ak4A:
undetectable		 1e7bB-3ak4A:
20.43
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1SG9_A_SAMA301_1
(HEMK PROTEIN)		 3ak4 NADH-DEPENDENT
QUINUCLIDINONE
REDUCTASE
(Agrobacterium
tumefaciens) 		4 / 4 THR A 191
GLY A  17
ASP A  40
ALA A  91
 NAD  A 901 (-2.8A)
None
NAD  A 901 (-2.8A)
NAD  A 901 ( 3.7A)
 1.27A 1sg9A-3ak4A:
6.2		 1sg9A-3ak4A:
23.44
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
1UAY_A_ADNA1001_1
(TYPE II
3-HYDROXYACYL-COA
DEHYDROGENASE)		 3ak4 NADH-DEPENDENT
QUINUCLIDINONE
REDUCTASE
(Agrobacterium
tumefaciens) 		8 / 11 GLY A  16
ASP A  40
LEU A  41
ASP A  63
VAL A  64
ALA A  91
VAL A  93
VAL A 113
 NAD  A 901 (-3.6A)
NAD  A 901 (-2.8A)
NAD  A 901 (-3.9A)
NAD  A 901 (-3.8A)
NAD  A 901 (-3.6A)
NAD  A 901 ( 3.7A)
None
NAD  A 901 ( 4.5A)
 0.49A 1uayA-3ak4A:
30.6		 1uayA-3ak4A:
33.57
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
1UAY_B_ADNB1002_1
(TYPE II
3-HYDROXYACYL-COA
DEHYDROGENASE)		 3ak4 NADH-DEPENDENT
QUINUCLIDINONE
REDUCTASE
(Agrobacterium
tumefaciens) 		8 / 10 GLY A  16
ASP A  40
LEU A  41
ASP A  63
VAL A  64
ALA A  91
VAL A  93
VAL A 113
 NAD  A 901 (-3.6A)
NAD  A 901 (-2.8A)
NAD  A 901 (-3.9A)
NAD  A 901 (-3.8A)
NAD  A 901 (-3.6A)
NAD  A 901 ( 3.7A)
None
NAD  A 901 ( 4.5A)
 0.53A 1uayB-3ak4A:
30.7		 1uayB-3ak4A:
33.57
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1Z35_A_2FAA300_1
(PURINE NUCLEOSIDE
PHOSPHORYLASE)		 3ak4 NADH-DEPENDENT
QUINUCLIDINONE
REDUCTASE
(Agrobacterium
tumefaciens) 		5 / 10 GLY A 187
THR A 191
VAL A 189
MET A 193
GLU A 197
 None
NAD  A 901 (-2.8A)
NAD  A 901 (-4.0A)
NAD  A 901 (-4.0A)
None
 1.35A 1z35A-3ak4A:
undetectable		 1z35A-3ak4A:
20.80
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2BM9_E_SAME301_0
(CEPHALOSPORIN
HYDROXYLASE CMCI)		 3ak4 NADH-DEPENDENT
QUINUCLIDINONE
REDUCTASE
(Agrobacterium
tumefaciens) 		5 / 12 GLY A  16
ASP A  40
ASP A  63
ASN A  90
ALA A  91
 NAD  A 901 (-3.6A)
NAD  A 901 (-2.8A)
NAD  A 901 (-3.8A)
NAD  A 901 (-3.6A)
NAD  A 901 ( 3.7A)
 0.94A 2bm9E-3ak4A:
5.4		 2bm9E-3ak4A:
21.17
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2JFA_A_RALA600_2
(ESTROGEN RECEPTOR)		 3ak4 NADH-DEPENDENT
QUINUCLIDINONE
REDUCTASE
(Agrobacterium
tumefaciens) 		4 / 5 LEU A  87
ASP A  85
MET A 174
LEU A 170
 None
 1.26A 2jfaA-3ak4A:
undetectable		 2jfaA-3ak4A:
18.93
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3DMF_A_SAMA388_0
(PROBABLE RIBOSOMAL
RNA SMALL SUBUNIT
METHYLTRANSFERASE)		 3ak4 NADH-DEPENDENT
QUINUCLIDINONE
REDUCTASE
(Agrobacterium
tumefaciens) 		5 / 12 GLY A  16
ALA A  24
ASP A  63
VAL A  64
VAL A 113
 NAD  A 901 (-3.6A)
None
NAD  A 901 (-3.8A)
NAD  A 901 (-3.6A)
NAD  A 901 ( 4.5A)
 0.97A 3dmfA-3ak4A:
6.2		 3dmfA-3ak4A:
21.00
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3Q87_B_SAMB300_0
(N6 ADENINE SPECIFIC
DNA METHYLASE)		 3ak4 NADH-DEPENDENT
QUINUCLIDINONE
REDUCTASE
(Agrobacterium
tumefaciens) 		5 / 12 GLY A  16
ILE A  25
ASP A  40
LEU A  41
ASP A  63
 NAD  A 901 (-3.6A)
None
NAD  A 901 (-2.8A)
NAD  A 901 (-3.9A)
NAD  A 901 (-3.8A)
 0.39A 3q87B-3ak4A:
6.6		 3q87B-3ak4A:
21.45
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3V4T_A_ACTA503_0
(UDP-N-ACETYLGLUCOSAM
INE
1-CARBOXYVINYLTRANSF
ERASE)		 3ak4 NADH-DEPENDENT
QUINUCLIDINONE
REDUCTASE
(Agrobacterium
tumefaciens) 		3 / 3 ARG A 196
GLU A 195
THR A 191
 NAD  A 901 (-3.4A)
None
NAD  A 901 (-2.8A)
 0.74A 3v4tA-3ak4A:
undetectable		 3v4tA-3ak4A:
22.97
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4EOH_A_TEPA402_1
(PYRIDOXAL KINASE)		 3ak4 NADH-DEPENDENT
QUINUCLIDINONE
REDUCTASE
(Agrobacterium
tumefaciens) 		4 / 5 GLY A  16
THR A  65
VAL A  62
ASP A  40
 NAD  A 901 (-3.6A)
NAD  A 901 ( 4.3A)
NAD  A 901 (-4.8A)
NAD  A 901 (-2.8A)
 1.02A 4eohA-3ak4A:
6.4		 4eohA-3ak4A:
21.17
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4HTF_A_SAMA301_0
(S-ADENOSYLMETHIONINE
-DEPENDENT
METHYLTRANSFERASE)		 3ak4 NADH-DEPENDENT
QUINUCLIDINONE
REDUCTASE
(Agrobacterium
tumefaciens) 		5 / 12 GLY A  22
GLY A  17
GLY A  16
ALA A 232
VAL A 189
 None
None
NAD  A 901 (-3.6A)
None
NAD  A 901 (-4.0A)
 0.91A 4htfA-3ak4A:
2.4		 4htfA-3ak4A:
22.62
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4L6V_1_PQN12001_1
(PHOTOSYSTEM I P700
CHLOROPHYLL A
APOPROTEIN A1
FUSION PROTEIN OF
PHOTOSYSTEM I
SUBUNIT III AND
SUBUNIT IX)		 3ak4 NADH-DEPENDENT
QUINUCLIDINONE
REDUCTASE
(Agrobacterium
tumefaciens) 		5 / 11 PHE A 188
GLY A 255
LEU A 144
GLY A 187
ALA A  99
 None
 1.14A 4l6v1-3ak4A:
undetectable
4l6v6-3ak4A:
undetectable		 4l6v1-3ak4A:
15.85
4l6v6-3ak4A:
18.92
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4PGH_A_SAMA401_0
(CAFFEIC ACID
O-METHYLTRANSFERASE)		 3ak4 NADH-DEPENDENT
QUINUCLIDINONE
REDUCTASE
(Agrobacterium
tumefaciens) 		5 / 11 GLY A  16
GLY A  17
ASP A  40
LEU A  41
ASP A  63
 NAD  A 901 (-3.6A)
None
NAD  A 901 (-2.8A)
NAD  A 901 (-3.9A)
NAD  A 901 (-3.8A)
 0.73A 4pghA-3ak4A:
5.1		 4pghA-3ak4A:
22.53
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4UCI_A_ADNA2414_1
(RNA-DIRECTED RNA
POLYMERASE L)		 3ak4 NADH-DEPENDENT
QUINUCLIDINONE
REDUCTASE
(Agrobacterium
tumefaciens) 		4 / 6 GLU A 106
PHE A 109
TYR A 156
HIS A 155
 None
None
NAD  A 901 (-4.8A)
None
 1.44A 4uciA-3ak4A:
undetectable		 4uciA-3ak4A:
21.29
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4UCI_B_ADNB2415_1
(RNA-DIRECTED RNA
POLYMERASE L)		 3ak4 NADH-DEPENDENT
QUINUCLIDINONE
REDUCTASE
(Agrobacterium
tumefaciens) 		4 / 7 GLU A 106
PHE A 109
TYR A 156
HIS A 155
 None
None
NAD  A 901 (-4.8A)
None
 1.40A 4uciB-3ak4A:
undetectable		 4uciB-3ak4A:
21.29
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5DPD_B_SAMB601_0
(PROTEIN LYSINE
METHYLTRANSFERASE 1)		 3ak4 NADH-DEPENDENT
QUINUCLIDINONE
REDUCTASE
(Agrobacterium
tumefaciens) 		5 / 12 GLY A  16
ASP A  40
LEU A  41
VAL A  93
VAL A 113
 NAD  A 901 (-3.6A)
NAD  A 901 (-2.8A)
NAD  A 901 (-3.9A)
None
NAD  A 901 ( 4.5A)
 0.92A 5dpdB-3ak4A:
5.6		 5dpdB-3ak4A:
18.50
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5UXD_A_ZITA501_1
(MACROLIDE
2'-PHOSPHOTRANSFERAS
E MPHH)		 3ak4 NADH-DEPENDENT
QUINUCLIDINONE
REDUCTASE
(Agrobacterium
tumefaciens) 		4 / 7 TYR A 216
PHE A 188
ALA A 145
GLY A 149
 None
 0.81A 5uxdA-3ak4A:
undetectable		 5uxdA-3ak4A:
26.05
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5Y9Y_A_ACTA412_0
(UNCHARACTERIZED
PROTEIN KDOO)		 3ak4 NADH-DEPENDENT
QUINUCLIDINONE
REDUCTASE
(Agrobacterium
tumefaciens) 		3 / 3 ARG A 127
PHE A 119
ARG A  67
 None
 0.96A 5y9yA-3ak4A:
undetectable		 5y9yA-3ak4A:
20.82
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
6CDU_D_EY4D500_0
(CHIMERIC ALPHA1GABAA
RECEPTOR)		 3ak4 NADH-DEPENDENT
QUINUCLIDINONE
REDUCTASE
(Agrobacterium
tumefaciens) 		4 / 7 ILE A  78
GLN A  75
ALA A  39
THR A  15
 None
 0.90A 6cduC-3ak4A:
undetectable
6cduD-3ak4A:
undetectable		 6cduC-3ak4A:
21.26
6cduD-3ak4A:
21.26
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
6CDU_E_EY4E500_0
(CHIMERIC ALPHA1GABAA
RECEPTOR)		 3ak4 NADH-DEPENDENT
QUINUCLIDINONE
REDUCTASE
(Agrobacterium
tumefaciens) 		4 / 8 ILE A  78
GLN A  75
ALA A  39
THR A  15
 None
 0.91A 6cduD-3ak4A:
undetectable
6cduE-3ak4A:
undetectable		 6cduD-3ak4A:
21.26
6cduE-3ak4A:
21.26
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
6CDU_F_EY4F500_0
(CHIMERIC ALPHA1GABAA
RECEPTOR)		 3ak4 NADH-DEPENDENT
QUINUCLIDINONE
REDUCTASE
(Agrobacterium
tumefaciens) 		4 / 7 ALA A  39
THR A  15
ILE A  78
GLN A  75
 None
 0.95A 6cduF-3ak4A:
undetectable
6cduJ-3ak4A:
undetectable		 6cduF-3ak4A:
21.26
6cduJ-3ak4A:
21.26