SIMILAR PATTERN OF AMINO ACIDS MAPPED TO '3akc'

List of Similar Pattern of Amino Acids

Hit pattern: 3D amino acid arrangements similar to known drug binding site
Query pattern: Residues from known binding site for annotated drug that match the hit pattern

(Click on the DrReposER ID to view details on interfaces and similar patterns of amino acids)
(Click on the view link on the last column to view superposed patterns of amino acids)
Filter list by:
DrReposER ID / Desc. Hit
PDBID		 Hit
Macromolecule		 Res.
Matches		 Interface HETATM RMSD Dali
Z-score		 Seq.
Identity (%)		 View Dock
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1BDW_A_DVAA6_0
(GRAMICIDIN A)		 3akc CYTIDYLATE KINASE
(Thermus
thermophilus) 		3 / 3 ALA A 200
VAL A 202
TRP A 201
 None
 0.91A 1bdwA-3akcA:
undetectable
1bdwB-3akcA:
undetectable		 1bdwA-3akcA:
5.56
1bdwB-3akcA:
5.56
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1RK3_A_VDXA500_1
(VITAMIN D3 RECEPTOR)		 3akc CYTIDYLATE KINASE
(Thermus
thermophilus) 		5 / 12 TYR A 141
SER A  13
SER A 179
VAL A  97
HIS A  89
 None
ADP  A 210 (-3.5A)
None
CDP  A 209 (-4.3A)
None
 1.47A 1rk3A-3akcA:
undetectable		 1rk3A-3akcA:
20.67
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2A1H_B_GBNB501_1
(BRANCHED CHAIN
AMINOTRANSFERASE)		 3akc CYTIDYLATE KINASE
(Thermus
thermophilus) 		5 / 8 TYR A  37
VAL A 110
GLY A 129
THR A 130
ALA A 131
 CDP  A 209 (-3.9A)
None
None
None
None
 1.02A 2a1hA-3akcA:
undetectable
2a1hB-3akcA:
undetectable		 2a1hA-3akcA:
21.37
2a1hB-3akcA:
21.37
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2COI_A_GBNA420_1
(BRANCHED CHAIN
AMINOTRANSFERASE 1,
CYTOSOLIC)		 3akc CYTIDYLATE KINASE
(Thermus
thermophilus) 		5 / 10 GLY A 129
THR A 130
ALA A 131
TYR A  37
VAL A 110
 None
None
None
CDP  A 209 (-3.9A)
None
 1.02A 2coiA-3akcA:
undetectable
2coiB-3akcA:
undetectable		 2coiA-3akcA:
22.05
2coiB-3akcA:
22.05
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2COI_B_GBNB420_1
(BRANCHED CHAIN
AMINOTRANSFERASE 1,
CYTOSOLIC)		 3akc CYTIDYLATE KINASE
(Thermus
thermophilus) 		5 / 10 TYR A  37
VAL A 110
GLY A 129
THR A 130
ALA A 131
 CDP  A 209 (-3.9A)
None
None
None
None
 0.98A 2coiA-3akcA:
undetectable
2coiB-3akcA:
undetectable		 2coiA-3akcA:
22.05
2coiB-3akcA:
22.05
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2COJ_A_GBNA420_1
(BRANCHED CHAIN
AMINOTRANSFERASE 1,
CYTOSOLIC)		 3akc CYTIDYLATE KINASE
(Thermus
thermophilus) 		5 / 11 GLY A 129
THR A 130
ALA A 131
TYR A  37
VAL A 110
 None
None
None
CDP  A 209 (-3.9A)
None
 1.00A 2cojA-3akcA:
undetectable
2cojB-3akcA:
undetectable		 2cojA-3akcA:
22.05
2cojB-3akcA:
22.05
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2COJ_B_GBNB420_1
(BRANCHED CHAIN
AMINOTRANSFERASE 1,
CYTOSOLIC)		 3akc CYTIDYLATE KINASE
(Thermus
thermophilus) 		5 / 9 TYR A  37
VAL A 110
GLY A 129
THR A 130
ALA A 131
 CDP  A 209 (-3.9A)
None
None
None
None
 1.00A 2cojA-3akcA:
undetectable
2cojB-3akcA:
undetectable		 2cojA-3akcA:
22.05
2cojB-3akcA:
22.05
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3MS9_B_STIB1_2
(TYROSINE-PROTEIN
KINASE ABL1)		 3akc CYTIDYLATE KINASE
(Thermus
thermophilus) 		4 / 7 TYR A  30
VAL A 117
ILE A   4
ARG A 107
 None
None
None
CDP  A 209 (-2.9A)
 1.12A 3ms9B-3akcA:
undetectable		 3ms9B-3akcA:
20.88
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3NDU_D_ROCD100_3
(PROTEASE)		 3akc CYTIDYLATE KINASE
(Thermus
thermophilus) 		3 / 3 ARG A  20
VAL A  77
THR A  85
 None
 0.85A 3nduD-3akcA:
undetectable		 3nduD-3akcA:
17.82
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3ROX_A_TEPA266_1
(APOLIPOPROTEIN
A-I-BINDING PROTEIN)		 3akc CYTIDYLATE KINASE
(Thermus
thermophilus) 		4 / 8 ALA A 101
VAL A 100
LEU A  57
LEU A  36
 CDP  A 209 (-3.6A)
None
None
None
 0.78A 3roxA-3akcA:
undetectable		 3roxA-3akcA:
20.28
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3VT3_A_VDXA500_1
(VITAMIN D3 RECEPTOR)		 3akc CYTIDYLATE KINASE
(Thermus
thermophilus) 		5 / 12 TYR A 141
SER A  13
SER A 179
VAL A  97
HIS A  89
 None
ADP  A 210 (-3.5A)
None
CDP  A 209 (-4.3A)
None
 1.44A 3vt3A-3akcA:
undetectable		 3vt3A-3akcA:
19.64
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4LV9_A_20JA601_1
(NICOTINAMIDE
PHOSPHORIBOSYLTRANSF
ERASE)		 3akc CYTIDYLATE KINASE
(Thermus
thermophilus) 		4 / 8 ARG A 170
ASP A 175
ALA A 101
ARG A 102
 None
CDP  A 209 (-2.8A)
CDP  A 209 (-3.6A)
None
 1.09A 4lv9A-3akcA:
undetectable
4lv9B-3akcA:
undetectable		 4lv9A-3akcA:
17.30
4lv9B-3akcA:
17.30
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4MX0_A_BCZA513_1
(NEURAMINIDASE)		 3akc CYTIDYLATE KINASE
(Thermus
thermophilus) 		3 / 3 ARG A 171
ASP A 172
ARG A 153
 CDP  A 209 (-3.0A)
None
CDP  A 209 ( 3.0A)
 0.86A 4mx0A-3akcA:
undetectable		 4mx0A-3akcA:
16.97
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4UUU_A_SAMA1546_0
(CYSTATHIONINE
BETA-SYNTHASE)		 3akc CYTIDYLATE KINASE
(Thermus
thermophilus) 		5 / 11 LEU A  43
PHE A  42
ALA A  39
VAL A  93
THR A  90
 None
 1.28A 4uuuA-3akcA:
undetectable
4uuuB-3akcA:
undetectable		 4uuuA-3akcA:
22.12
4uuuB-3akcA:
22.12
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4UUU_B_SAMB1548_0
(CYSTATHIONINE
BETA-SYNTHASE)		 3akc CYTIDYLATE KINASE
(Thermus
thermophilus) 		5 / 11 LEU A  43
PHE A  42
ALA A  39
VAL A  93
THR A  90
 None
 1.25A 4uuuB-3akcA:
undetectable		 4uuuB-3akcA:
22.12
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4X20_D_LOCD502_1
(TUBULIN ALPHA CHAIN
TUBULIN BETA CHAIN)		 3akc CYTIDYLATE KINASE
(Thermus
thermophilus) 		3 / 3 SER A  33
ALA A 123
VAL A 122
 CDP  A 209 (-3.1A)
None
None
 0.64A 4x20C-3akcA:
undetectable		 4x20C-3akcA:
18.50
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5DXB_A_ESTA1000_1
(ESTROGEN RECEPTOR)		 3akc CYTIDYLATE KINASE
(Thermus
thermophilus) 		5 / 10 LEU A  36
ALA A  39
LEU A  84
GLY A  65
LEU A  61
 None
 1.23A 5dxbA-3akcA:
undetectable		 5dxbA-3akcA:
22.61
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5H1E_A_VDXA501_1
(VITAMIN D3 RECEPTOR)		 3akc CYTIDYLATE KINASE
(Thermus
thermophilus) 		5 / 12 TYR A 141
SER A  13
SER A 179
VAL A  97
HIS A  89
 None
ADP  A 210 (-3.5A)
None
CDP  A 209 (-4.3A)
None
 1.45A 5h1eA-3akcA:
undetectable		 5h1eA-3akcA:
19.64
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5L8D_B_ACTB601_0
(NICKEL-BINDING
PERIPLASMIC PROTEIN)		 3akc CYTIDYLATE KINASE
(Thermus
thermophilus) 		3 / 3 THR A 143
PRO A  10
ASP A 172
 None
 0.93A 5l8dB-3akcA:
undetectable		 5l8dB-3akcA:
18.02
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5MWU_B_ACTB601_0
(NICKEL-BINDING
PERIPLASMIC PROTEIN)		 3akc CYTIDYLATE KINASE
(Thermus
thermophilus) 		3 / 3 THR A 143
PRO A  10
ASP A 172
 None
 0.93A 5mwuB-3akcA:
undetectable		 5mwuB-3akcA:
18.02
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5VOO_A_C2FA3001_0
(5-METHYLTETRAHYDROFO
LATE HOMOCYSTEINE
S-METHYLTRANSFERASE)		 3akc CYTIDYLATE KINASE
(Thermus
thermophilus) 		5 / 12 GLY A  14
ASP A   8
VAL A 132
LEU A 114
ARG A 153
 ADP  A 210 (-3.1A)
None
None
None
CDP  A 209 ( 3.0A)
 1.14A 5vooA-3akcA:
undetectable		 5vooA-3akcA:
25.16
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5VOO_C_C2FC702_0
(5-METHYLTETRAHYDROFO
LATE HOMOCYSTEINE
S-METHYLTRANSFERASE)		 3akc CYTIDYLATE KINASE
(Thermus
thermophilus) 		5 / 12 GLY A  14
ASP A   8
VAL A 132
LEU A 114
ARG A 153
 ADP  A 210 (-3.1A)
None
None
None
CDP  A 209 ( 3.0A)
 1.13A 5vooC-3akcA:
undetectable		 5vooC-3akcA:
25.16
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5ZVG_A_SAMA401_1
(389AA LONG
HYPOTHETICAL
NUCLEOLAR PROTEIN)		 3akc CYTIDYLATE KINASE
(Thermus
thermophilus) 		3 / 3 ASP A 175
ARG A 126
ASP A  94
 CDP  A 209 (-2.8A)
CDP  A 209 (-3.0A)
None
 0.83A 5zvgA-3akcA:
undetectable		 5zvgA-3akcA:
20.36
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5ZVG_B_SAMB401_1
(389AA LONG
HYPOTHETICAL
NUCLEOLAR PROTEIN)		 3akc CYTIDYLATE KINASE
(Thermus
thermophilus) 		3 / 3 ASP A 175
ARG A 126
ASP A  94
 CDP  A 209 (-2.8A)
CDP  A 209 (-3.0A)
None
 0.82A 5zvgB-3akcA:
undetectable		 5zvgB-3akcA:
20.36
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
7DFR_A_FOLA161_1
(DIHYDROFOLATE
REDUCTASE)		 3akc CYTIDYLATE KINASE
(Thermus
thermophilus) 		3 / 3 ASP A 196
LEU A 195
ARG A 155
 None
ADP  A 210 (-4.2A)
ADP  A 210 (-4.2A)
 0.82A 7dfrA-3akcA:
undetectable		 7dfrA-3akcA:
23.94