SIMILAR PATTERN OF AMINO ACIDS MAPPED TO '3asf'

List of Similar Pattern of Amino Acids

Hit pattern: 3D amino acid arrangements similar to known drug binding site
Query pattern: Residues from known binding site for annotated drug that match the hit pattern

(Click on the DrReposER ID to view details on interfaces and similar patterns of amino acids)
(Click on the view link on the last column to view superposed patterns of amino acids)
Filter list by:
DrReposER ID / Desc. Hit
PDBID		 Hit
Macromolecule		 Res.
Matches		 Interface HETATM RMSD Dali
Z-score		 Seq.
Identity (%)		 View Dock
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1Q23_J_FUAJ711_2
(CHLORAMPHENICOL
ACETYLTRANSFERASE)		 3asf MAGNETOSOME PROTEIN
MAMA
(Magnetospirillum
gryphiswaldense) 		4 / 4 ALA A  89
VAL A  66
ALA A  65
HIS A  85
 None
 1.25A 1q23K-3asfA:
undetectable		 1q23K-3asfA:
23.40
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2OCU_A_TYLA3001_1
(LACTOTRANSFERRIN)		 3asf MAGNETOSOME PROTEIN
MAMA
(Magnetospirillum
gryphiswaldense) 		3 / 3 LEU A  86
TYR A  90
GLY A  94
 None
 0.59A 2ocuA-3asfA:
undetectable		 2ocuA-3asfA:
22.74
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4G24_A_ACAA1004_1
(PENTATRICOPEPTIDE
REPEAT-CONTAINING
PROTEIN AT2G32230,
MITOCHONDRIAL)		 3asf MAGNETOSOME PROTEIN
MAMA
(Magnetospirillum
gryphiswaldense) 		4 / 6 ALA A 133
LEU A 137
VAL A 138
GLU A 166
 None
None
None
SO4  A  24 (-3.8A)
 0.86A 4g24A-3asfA:
5.7		 4g24A-3asfA:
17.44
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4P6V_E_RBFE201_1
(NA(+)-TRANSLOCATING
NADH-QUINONE
REDUCTASE SUBUNIT B
NA(+)-TRANSLOCATING
NADH-QUINONE
REDUCTASE SUBUNIT E)		 3asf MAGNETOSOME PROTEIN
MAMA
(Magnetospirillum
gryphiswaldense) 		4 / 5 HIS A  85
VAL A  82
GLU A  81
LYS A 115
 None
 1.32A 4p6vB-3asfA:
undetectable
4p6vE-3asfA:
undetectable		 4p6vB-3asfA:
17.87
4p6vE-3asfA:
21.50
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5G44_A_YTZA1512_1
(NUCLEAR RECEPTOR
ROR-GAMMA)		 3asf MAGNETOSOME PROTEIN
MAMA
(Magnetospirillum
gryphiswaldense) 		5 / 9 LEU A 154
LEU A 158
ALA A 174
VAL A 184
ALA A 167
 None
 1.33A 5g44A-3asfA:
undetectable		 5g44A-3asfA:
21.54