SIMILAR PATTERN OF AMINO ACIDS MAPPED TO '3axs'

List of Similar Pattern of Amino Acids

Hit pattern: 3D amino acid arrangements similar to known drug binding site

Query pattern: Residues from known binding site for annotated drug that match the hit pattern


(Click on the DrReposER ID to view details on interfaces and similar patterns of amino acids)
(Click on the view link on the last column to view superposed patterns of amino acids)
Filter list by:
DrReposER ID / Desc. Hit
PDBID
Hit
Macromolecule
Res.
Matches
Interface HETATM RMSD Dali
Z-score
Seq.
Identity (%)
View Dock
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1D4Y_A_TPVA501_1
(PROTEIN (HIV-1
PROTEASE))
3axs PROBABLE
N(2),N(2)-DIMETHYLGU
ANOSINE TRNA
METHYLTRANSFERASE
TRM1

(Aquifex
aeolicus)
5 / 10 LEU A  43
ASP A 132
GLY A  64
ILE A  68
VAL A  56
None
SFG  A 501 (-3.7A)
None
None
None
1.01A 1d4yA-3axsA:
undetectable
1d4yA-3axsA:
14.93
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1K4T_D_TTCD990_1
(DNA TOPOISOMERASE I)
3axs PROBABLE
N(2),N(2)-DIMETHYLGU
ANOSINE TRNA
METHYLTRANSFERASE
TRM1

(Aquifex
aeolicus)
4 / 5 GLU A 304
ARG A  66
ASP A 132
THR A 159
None
SFG  A 501 (-4.3A)
SFG  A 501 (-3.7A)
None
1.39A 1k4tA-3axsA:
0.1
1k4tA-3axsA:
21.56
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1NT2_A_SAMA301_0
(FIBRILLARIN-LIKE
PRE-RRNA PROCESSING
PROTEIN)
3axs PROBABLE
N(2),N(2)-DIMETHYLGU
ANOSINE TRNA
METHYLTRANSFERASE
TRM1

(Aquifex
aeolicus)
5 / 12 ALA A  62
SER A  63
SER A  86
ALA A 114
ASP A 132
SFG  A 501 (-3.4A)
SFG  A 501 ( 4.4A)
SFG  A 501 ( 4.7A)
SFG  A 501 (-3.6A)
SFG  A 501 (-3.7A)
0.75A 1nt2A-3axsA:
13.7
1nt2A-3axsA:
18.69
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1T7I_A_017A200_2
(POL POLYPROTEIN)
3axs PROBABLE
N(2),N(2)-DIMETHYLGU
ANOSINE TRNA
METHYLTRANSFERASE
TRM1

(Aquifex
aeolicus)
4 / 7 ALA A 162
GLY A 190
ILE A 193
THR A 136
SO4  A 503 (-3.5A)
None
None
None
0.68A 1t7iB-3axsA:
undetectable
1t7iB-3axsA:
16.06
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1T7J_A_478A200_2
(POL POLYPROTEIN)
3axs PROBABLE
N(2),N(2)-DIMETHYLGU
ANOSINE TRNA
METHYLTRANSFERASE
TRM1

(Aquifex
aeolicus)
4 / 7 ALA A 162
GLY A 190
ILE A 193
THR A 136
SO4  A 503 (-3.5A)
None
None
None
0.74A 1t7jB-3axsA:
undetectable
1t7jB-3axsA:
16.06
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1XDK_B_9CRB600_2
(RETINOIC ACID
RECEPTOR, BETA)
3axs PROBABLE
N(2),N(2)-DIMETHYLGU
ANOSINE TRNA
METHYLTRANSFERASE
TRM1

(Aquifex
aeolicus)
3 / 3 LEU A 194
PHE A 221
ARG A 182
None
0.89A 1xdkB-3axsA:
undetectable
1xdkB-3axsA:
21.09
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
2EJT_A_SAMA501_0
(N(2),N(2)-DIMETHYLGU
ANOSINE TRNA
METHYLTRANSFERASE)
3axs PROBABLE
N(2),N(2)-DIMETHYLGU
ANOSINE TRNA
METHYLTRANSFERASE
TRM1

(Aquifex
aeolicus)
5 / 12 ASP A  58
ILE A  68
ASN A  83
ILE A  85
ALA A 114
SFG  A 501 ( 4.6A)
None
SFG  A 501 ( 4.7A)
SFG  A 501 (-3.7A)
SFG  A 501 (-3.6A)
1.18A 2ejtA-3axsA:
44.3
2ejtA-3axsA:
38.52
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
2EJT_A_SAMA501_0
(N(2),N(2)-DIMETHYLGU
ANOSINE TRNA
METHYLTRANSFERASE)
3axs PROBABLE
N(2),N(2)-DIMETHYLGU
ANOSINE TRNA
METHYLTRANSFERASE
TRM1

(Aquifex
aeolicus)
11 / 12 ASP A  58
LEU A  60
ALA A  62
ILE A  65
ARG A  66
ASN A  83
ILE A  85
SER A  86
ALA A 114
ASP A 132
PHE A 140
SFG  A 501 ( 4.6A)
SFG  A 501 (-3.7A)
SFG  A 501 (-3.4A)
None
SFG  A 501 (-4.3A)
SFG  A 501 ( 4.7A)
SFG  A 501 (-3.7A)
SFG  A 501 ( 4.7A)
SFG  A 501 (-3.6A)
SFG  A 501 (-3.7A)
None
0.50A 2ejtA-3axsA:
44.3
2ejtA-3axsA:
38.52
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2NMZ_B_ROCB401_2
(PROTEASE)
3axs PROBABLE
N(2),N(2)-DIMETHYLGU
ANOSINE TRNA
METHYLTRANSFERASE
TRM1

(Aquifex
aeolicus)
3 / 3 ARG A 192
VAL A 358
THR A 355
None
0.73A 2nmzA-3axsA:
undetectable
2nmzA-3axsA:
15.21
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2NNK_A_ROCA401_2
(PROTEASE)
3axs PROBABLE
N(2),N(2)-DIMETHYLGU
ANOSINE TRNA
METHYLTRANSFERASE
TRM1

(Aquifex
aeolicus)
3 / 3 ARG A 192
VAL A 358
THR A 355
None
0.75A 2nnkA-3axsA:
undetectable
2nnkA-3axsA:
14.93
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2O4P_A_TPVA300_1
(PROTEASE)
3axs PROBABLE
N(2),N(2)-DIMETHYLGU
ANOSINE TRNA
METHYLTRANSFERASE
TRM1

(Aquifex
aeolicus)
5 / 11 LEU A  43
ASP A 132
GLY A  64
ILE A  68
VAL A  56
None
SFG  A 501 (-3.7A)
None
None
None
1.06A 2o4pA-3axsA:
undetectable
2o4pA-3axsA:
16.06
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2Q9R_A_BEZA203_0
(PROTEIN OF UNKNOWN
FUNCTION)
3axs PROBABLE
N(2),N(2)-DIMETHYLGU
ANOSINE TRNA
METHYLTRANSFERASE
TRM1

(Aquifex
aeolicus)
4 / 5 LEU A  72
GLY A   7
ILE A  65
ILE A  68
None
0.77A 2q9rA-3axsA:
undetectable
2q9rA-3axsA:
17.09
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2WM3_A_NFLA1301_1
(NMRA-LIKE FAMILY
DOMAIN CONTAINING
PROTEIN 1)
3axs PROBABLE
N(2),N(2)-DIMETHYLGU
ANOSINE TRNA
METHYLTRANSFERASE
TRM1

(Aquifex
aeolicus)
4 / 6 LEU A 146
ARG A 229
LEU A 201
ASP A 206
None
1.06A 2wm3A-3axsA:
2.1
2wm3A-3axsA:
20.50
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
3AXT_A_SAMA397_0
(PROBABLE
N(2),N(2)-DIMETHYLGU
ANOSINE TRNA
METHYLTRANSFERASE
TRM1)
3axs PROBABLE
N(2),N(2)-DIMETHYLGU
ANOSINE TRNA
METHYLTRANSFERASE
TRM1

(Aquifex
aeolicus)
12 / 12 ARG A  36
LEU A  60
ALA A  62
ILE A  65
ARG A  66
ASP A  84
ILE A  85
SER A  86
GLU A 113
ALA A 114
ASP A 132
PHE A 134
SFG  A 501 (-4.2A)
SFG  A 501 (-3.7A)
SFG  A 501 (-3.4A)
None
SFG  A 501 (-4.3A)
SFG  A 501 (-2.8A)
SFG  A 501 (-3.7A)
SFG  A 501 ( 4.7A)
SFG  A 501 (-4.0A)
SFG  A 501 (-3.6A)
SFG  A 501 (-3.7A)
SFG  A 501 (-3.3A)
0.20A 3axtA-3axsA:
66.8
3axtA-3axsA:
100.00
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
3AXT_A_SAMA397_0
(PROBABLE
N(2),N(2)-DIMETHYLGU
ANOSINE TRNA
METHYLTRANSFERASE
TRM1)
3axs PROBABLE
N(2),N(2)-DIMETHYLGU
ANOSINE TRNA
METHYLTRANSFERASE
TRM1

(Aquifex
aeolicus)
5 / 12 ILE A  68
ASP A  84
ILE A  85
GLU A 113
ALA A 114
None
SFG  A 501 (-2.8A)
SFG  A 501 (-3.7A)
SFG  A 501 (-4.0A)
SFG  A 501 (-3.6A)
1.04A 3axtA-3axsA:
66.8
3axtA-3axsA:
100.00
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3K4V_B_ROCB201_2
(HIV-1 PROTEASE)
3axs PROBABLE
N(2),N(2)-DIMETHYLGU
ANOSINE TRNA
METHYLTRANSFERASE
TRM1

(Aquifex
aeolicus)
3 / 3 ARG A 192
VAL A 358
THR A 355
None
0.82A 3k4vA-3axsA:
undetectable
3k4vA-3axsA:
14.40
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3K4V_D_ROCD201_4
(HIV-1 PROTEASE)
3axs PROBABLE
N(2),N(2)-DIMETHYLGU
ANOSINE TRNA
METHYLTRANSFERASE
TRM1

(Aquifex
aeolicus)
3 / 3 ARG A 192
VAL A 358
THR A 355
None
0.84A 3k4vD-3axsA:
undetectable
3k4vD-3axsA:
14.93
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3MBG_C_ACTC800_0
(FAD-LINKED
SULFHYDRYL OXIDASE
ALR)
3axs PROBABLE
N(2),N(2)-DIMETHYLGU
ANOSINE TRNA
METHYLTRANSFERASE
TRM1

(Aquifex
aeolicus)
3 / 3 ASP A 130
ARG A  36
ALA A  39
None
SFG  A 501 (-4.2A)
None
0.67A 3mbgC-3axsA:
undetectable
3mbgC-3axsA:
12.81
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3NDU_D_ROCD100_3
(PROTEASE)
3axs PROBABLE
N(2),N(2)-DIMETHYLGU
ANOSINE TRNA
METHYLTRANSFERASE
TRM1

(Aquifex
aeolicus)
3 / 3 ARG A 192
VAL A 358
THR A 355
None
0.84A 3nduD-3axsA:
undetectable
3nduD-3axsA:
14.40
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3PWR_A_ROCA401_2
(PROTEASE)
3axs PROBABLE
N(2),N(2)-DIMETHYLGU
ANOSINE TRNA
METHYLTRANSFERASE
TRM1

(Aquifex
aeolicus)
3 / 3 ARG A 192
VAL A 358
THR A 355
None
0.73A 3pwrA-3axsA:
undetectable
3pwrA-3axsA:
15.21
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3SMT_A_ACTA1001_0
(HISTONE-LYSINE
N-METHYLTRANSFERASE
SETD3)
3axs PROBABLE
N(2),N(2)-DIMETHYLGU
ANOSINE TRNA
METHYLTRANSFERASE
TRM1

(Aquifex
aeolicus)
4 / 5 LEU A  41
GLY A  42
PHE A 292
ARG A 300
None
0.67A 3smtA-3axsA:
undetectable
3smtA-3axsA:
22.20
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3TL9_A_ROCA401_2
(PROTEASE)
3axs PROBABLE
N(2),N(2)-DIMETHYLGU
ANOSINE TRNA
METHYLTRANSFERASE
TRM1

(Aquifex
aeolicus)
3 / 3 ARG A 192
VAL A 358
THR A 355
None
0.78A 3tl9A-3axsA:
undetectable
3tl9A-3axsA:
14.40
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4FOX_E_D16E301_1
(THYMIDYLATE SYNTHASE)
3axs PROBABLE
N(2),N(2)-DIMETHYLGU
ANOSINE TRNA
METHYLTRANSFERASE
TRM1

(Aquifex
aeolicus)
5 / 12 HIS A 187
SER A 216
ILE A 191
TRP A 280
PHE A 221
None
1.40A 4foxE-3axsA:
undetectable
4foxE-3axsA:
20.40
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4O8Z_A_BBIA402_1
(NAD-DEPENDENT
PROTEIN DEACETYLASE
SIRTUIN-3,
MITOCHONDRIAL)
3axs PROBABLE
N(2),N(2)-DIMETHYLGU
ANOSINE TRNA
METHYLTRANSFERASE
TRM1

(Aquifex
aeolicus)
4 / 5 PHE A 213
PHE A 224
LEU A 194
PRO A 137
None
1.18A 4o8zA-3axsA:
undetectable
4o8zA-3axsA:
20.59
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4XI3_C_29SC601_2
(ESTROGEN RECEPTOR)
3axs PROBABLE
N(2),N(2)-DIMETHYLGU
ANOSINE TRNA
METHYLTRANSFERASE
TRM1

(Aquifex
aeolicus)
4 / 6 LEU A  38
ASP A 130
HIS A 217
PRO A 133
None
0.97A 4xi3C-3axsA:
undetectable
4xi3C-3axsA:
22.40
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5HM8_A_ADNA501_2
(ADENOSYLHOMOCYSTEINA
SE)
3axs PROBABLE
N(2),N(2)-DIMETHYLGU
ANOSINE TRNA
METHYLTRANSFERASE
TRM1

(Aquifex
aeolicus)
4 / 5 GLU A  73
THR A  74
GLU A 296
LEU A  38
None
1.14A 5hm8A-3axsA:
2.8
5hm8A-3axsA:
20.82
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5HM8_B_ADNB501_2
(ADENOSYLHOMOCYSTEINA
SE)
3axs PROBABLE
N(2),N(2)-DIMETHYLGU
ANOSINE TRNA
METHYLTRANSFERASE
TRM1

(Aquifex
aeolicus)
4 / 5 GLU A  73
THR A  74
GLU A 296
LEU A  38
None
1.14A 5hm8B-3axsA:
2.8
5hm8B-3axsA:
20.82
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5HM8_C_ADNC501_2
(ADENOSYLHOMOCYSTEINA
SE)
3axs PROBABLE
N(2),N(2)-DIMETHYLGU
ANOSINE TRNA
METHYLTRANSFERASE
TRM1

(Aquifex
aeolicus)
4 / 5 GLU A  73
THR A  74
GLU A 296
LEU A  38
None
1.14A 5hm8C-3axsA:
2.5
5hm8C-3axsA:
20.82
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5HM8_D_ADND501_2
(ADENOSYLHOMOCYSTEINA
SE)
3axs PROBABLE
N(2),N(2)-DIMETHYLGU
ANOSINE TRNA
METHYLTRANSFERASE
TRM1

(Aquifex
aeolicus)
4 / 5 GLU A  73
THR A  74
GLU A 296
LEU A  38
None
1.14A 5hm8D-3axsA:
2.8
5hm8D-3axsA:
20.82
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5HM8_E_ADNE501_2
(ADENOSYLHOMOCYSTEINA
SE)
3axs PROBABLE
N(2),N(2)-DIMETHYLGU
ANOSINE TRNA
METHYLTRANSFERASE
TRM1

(Aquifex
aeolicus)
4 / 5 GLU A  73
THR A  74
GLU A 296
LEU A  38
None
1.14A 5hm8E-3axsA:
4.5
5hm8E-3axsA:
20.82
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5HM8_F_ADNF501_2
(ADENOSYLHOMOCYSTEINA
SE)
3axs PROBABLE
N(2),N(2)-DIMETHYLGU
ANOSINE TRNA
METHYLTRANSFERASE
TRM1

(Aquifex
aeolicus)
4 / 5 GLU A  73
THR A  74
GLU A 296
LEU A  38
None
1.14A 5hm8F-3axsA:
5.0
5hm8F-3axsA:
20.82
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5HM8_G_ADNG501_2
(ADENOSYLHOMOCYSTEINA
SE)
3axs PROBABLE
N(2),N(2)-DIMETHYLGU
ANOSINE TRNA
METHYLTRANSFERASE
TRM1

(Aquifex
aeolicus)
4 / 5 GLU A  73
THR A  74
GLU A 296
LEU A  38
None
1.21A 5hm8G-3axsA:
4.4
5hm8G-3axsA:
20.82
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5HM8_H_ADNH501_2
(ADENOSYLHOMOCYSTEINA
SE)
3axs PROBABLE
N(2),N(2)-DIMETHYLGU
ANOSINE TRNA
METHYLTRANSFERASE
TRM1

(Aquifex
aeolicus)
4 / 5 GLU A  73
THR A  74
GLU A 296
LEU A  38
None
1.14A 5hm8H-3axsA:
4.9
5hm8H-3axsA:
20.82
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5N4T_B_BEZB306_0
(BETA-LACTAMASE VIM-2)
3axs PROBABLE
N(2),N(2)-DIMETHYLGU
ANOSINE TRNA
METHYLTRANSFERASE
TRM1

(Aquifex
aeolicus)
3 / 3 HIS A 110
ASN A  83
ALA A  57
SO4  A 506 (-3.8A)
SFG  A 501 ( 4.7A)
None
0.78A 5n4tB-3axsA:
2.0
5n4tB-3axsA:
21.05