SIMILAR PATTERN OF AMINO ACIDS MAPPED TO '3bij'

List of Similar Pattern of Amino Acids

Hit pattern: 3D amino acid arrangements similar to known drug binding site
Query pattern: Residues from known binding site for annotated drug that match the hit pattern

(Click on the DrReposER ID to view details on interfaces and similar patterns of amino acids)
(Click on the view link on the last column to view superposed patterns of amino acids)
Filter list by:
DrReposER ID / Desc. Hit
PDBID		 Hit
Macromolecule		 Res.
Matches		 Interface HETATM RMSD Dali
Z-score		 Seq.
Identity (%)		 View Dock
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2NXE_A_SAMA302_1
(RIBOSOMAL PROTEIN
L11
METHYLTRANSFERASE)		 3bij UNCHARACTERIZED
PROTEIN GSU0716
(Geobacter
sulfurreducens) 		3 / 3 THR A  52
ASP A 216
SER A 214
 None
 0.59A 2nxeA-3bijA:
undetectable		 2nxeA-3bijA:
23.10
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2NXE_B_SAMB303_1
(RIBOSOMAL PROTEIN
L11
METHYLTRANSFERASE)		 3bij UNCHARACTERIZED
PROTEIN GSU0716
(Geobacter
sulfurreducens) 		3 / 3 THR A  52
ASP A 216
SER A 214
 None
 0.65A 2nxeB-3bijA:
undetectable		 2nxeB-3bijA:
23.10
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2Y00_B_Y00B601_1
(BETA-1 ADRENERGIC
RECEPTOR)		 3bij UNCHARACTERIZED
PROTEIN GSU0716
(Geobacter
sulfurreducens) 		5 / 12 LEU A  11
THR A 102
VAL A  88
PHE A 182
TYR A  19
 None
 1.41A 2y00B-3bijA:
undetectable		 2y00B-3bijA:
24.47
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2Y01_B_Y00B601_1
(BETA-1 ADRENERGIC
RECEPTOR)		 3bij UNCHARACTERIZED
PROTEIN GSU0716
(Geobacter
sulfurreducens) 		5 / 12 LEU A  11
THR A 102
VAL A  88
PHE A 182
TYR A  19
 None
 1.40A 2y01B-3bijA:
undetectable		 2y01B-3bijA:
24.47
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4ACB_C_DXCC1478_0
(TRANSLATION
ELONGATION FACTOR
SELB)		 3bij UNCHARACTERIZED
PROTEIN GSU0716
(Geobacter
sulfurreducens) 		4 / 6 ASP A  90
THR A 102
ILE A 111
THR A  91
 None
 1.08A 4acbC-3bijA:
undetectable		 4acbC-3bijA:
19.75
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4IK7_A_IMNA201_1
(TRANSTHYRETIN)		 3bij UNCHARACTERIZED
PROTEIN GSU0716
(Geobacter
sulfurreducens) 		4 / 7 MET A  78
ALA A   8
THR A  49
VAL A  47
 None
 0.92A 4ik7A-3bijA:
undetectable		 4ik7A-3bijA:
19.29
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4LG1_A_SAMA301_0
(PROTEIN-LYSINE
METHYLTRANSFERASE
METTL21D)		 3bij UNCHARACTERIZED
PROTEIN GSU0716
(Geobacter
sulfurreducens) 		5 / 12 GLY A  83
GLY A  10
LEU A   9
TYR A  19
GLU A 109
 None
 1.06A 4lg1A-3bijA:
undetectable		 4lg1A-3bijA:
20.49
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4LG1_B_SAMB301_0
(PROTEIN-LYSINE
METHYLTRANSFERASE
METTL21D)		 3bij UNCHARACTERIZED
PROTEIN GSU0716
(Geobacter
sulfurreducens) 		5 / 12 GLY A  83
GLY A  10
LEU A   9
TYR A  19
GLU A 109
 None
 1.10A 4lg1B-3bijA:
undetectable		 4lg1B-3bijA:
20.49
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4Q5M_A_ROCA1101_3
(PROTEASE)		 3bij UNCHARACTERIZED
PROTEIN GSU0716
(Geobacter
sulfurreducens) 		3 / 3 ASP A 133
ASP A  32
ASN A  27
 None
 0.84A 4q5mA-3bijA:
undetectable		 4q5mA-3bijA:
20.14
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4QA0_A_SHHA404_1
(HISTONE DEACETYLASE
8)		 3bij UNCHARACTERIZED
PROTEIN GSU0716
(Geobacter
sulfurreducens) 		5 / 12 GLY A 207
PHE A 223
ASP A  32
MET A  36
GLY A 221
 None
 1.17A 4qa0A-3bijA:
undetectable		 4qa0A-3bijA:
23.11
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4QA2_A_SHHA404_1
(HISTONE DEACETYLASE
8)		 3bij UNCHARACTERIZED
PROTEIN GSU0716
(Geobacter
sulfurreducens) 		5 / 12 GLY A 207
PHE A 223
ASP A  32
MET A  36
GLY A 221
 None
 1.30A 4qa2A-3bijA:
undetectable		 4qa2A-3bijA:
23.11
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4QA2_B_SHHB404_1
(HISTONE DEACETYLASE
8)		 3bij UNCHARACTERIZED
PROTEIN GSU0716
(Geobacter
sulfurreducens) 		5 / 12 GLY A 207
PHE A 223
ASP A  32
MET A  36
GLY A 221
 None
 1.29A 4qa2B-3bijA:
undetectable		 4qa2B-3bijA:
23.11
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4QWP_B_GCSB305_1
(CHITOSANASE)		 3bij UNCHARACTERIZED
PROTEIN GSU0716
(Geobacter
sulfurreducens) 		3 / 3 GLY A 207
PRO A 257
GLN A 212
 None
 0.59A 4qwpB-3bijA:
undetectable		 4qwpB-3bijA:
23.70
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4UBS_A_DIFA502_1
(PENTALENIC ACID
SYNTHASE)		 3bij UNCHARACTERIZED
PROTEIN GSU0716
(Geobacter
sulfurreducens) 		5 / 9 LEU A  50
LEU A 115
SER A  80
LEU A   7
ILE A  64
 None
 1.00A 4ubsA-3bijA:
undetectable		 4ubsA-3bijA:
20.60
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5ESK_A_1YNA701_1
(LANOSTEROL 14-ALPHA
DEMETHYLASE)		 3bij UNCHARACTERIZED
PROTEIN GSU0716
(Geobacter
sulfurreducens) 		5 / 12 GLY A  85
LEU A  79
ILE A   5
GLY A  65
THR A 102
 None
 1.16A 5eskA-3bijA:
undetectable		 5eskA-3bijA:
20.33