SIMILAR PATTERN OF AMINO ACIDS MAPPED TO '3bjq'

List of Similar Pattern of Amino Acids

Hit pattern: 3D amino acid arrangements similar to known drug binding site
Query pattern: Residues from known binding site for annotated drug that match the hit pattern

(Click on the DrReposER ID to view details on interfaces and similar patterns of amino acids)
(Click on the view link on the last column to view superposed patterns of amino acids)
Filter list by:
DrReposER ID / Desc. Hit
PDBID		 Hit
Macromolecule		 Res.
Matches		 Interface HETATM RMSD Dali
Z-score		 Seq.
Identity (%)		 View Dock
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1DFO_A_FFOA1002_1
(SERINE
HYDROXYMETHYLTRANSFE
RASE)		 3bjq PHAGE-RELATED
PROTEIN
(Bordetella
bronchiseptica) 		4 / 5 TYR A 264
TYR A 266
PHE A  49
PRO A 260
 None
 1.27A 1dfoB-3bjqA:
undetectable		 1dfoB-3bjqA:
23.76
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1DFO_B_FFOB2002_0
(SERINE
HYDROXYMETHYLTRANSFE
RASE)		 3bjq PHAGE-RELATED
PROTEIN
(Bordetella
bronchiseptica) 		4 / 5 TYR A 264
TYR A 266
PHE A  49
PRO A 260
 None
 1.26A 1dfoA-3bjqA:
undetectable		 1dfoA-3bjqA:
23.76
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1DFO_C_FFOC3002_2
(SERINE
HYDROXYMETHYLTRANSFE
RASE)		 3bjq PHAGE-RELATED
PROTEIN
(Bordetella
bronchiseptica) 		4 / 5 TYR A 264
TYR A 266
PHE A  49
PRO A 260
 None
 1.26A 1dfoD-3bjqA:
undetectable		 1dfoD-3bjqA:
23.76
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1DFO_D_FFOD4002_0
(SERINE
HYDROXYMETHYLTRANSFE
RASE)		 3bjq PHAGE-RELATED
PROTEIN
(Bordetella
bronchiseptica) 		4 / 5 TYR A 264
TYR A 266
PHE A  49
PRO A 260
 None
 1.26A 1dfoC-3bjqA:
undetectable		 1dfoC-3bjqA:
23.76
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1YA4_B_CTXB2_2
(CES1 PROTEIN)		 3bjq PHAGE-RELATED
PROTEIN
(Bordetella
bronchiseptica) 		4 / 4 LEU A 131
PRO A 176
ILE A 307
LEU A 306
 None
 0.89A 1ya4B-3bjqA:
undetectable		 1ya4B-3bjqA:
22.20
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1YA4_C_CTXC3_2
(CES1 PROTEIN)		 3bjq PHAGE-RELATED
PROTEIN
(Bordetella
bronchiseptica) 		4 / 4 LEU A 131
PRO A 176
ILE A 307
LEU A 306
 None
 0.82A 1ya4C-3bjqA:
undetectable		 1ya4C-3bjqA:
22.20
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2BXQ_A_IMNA2003_1
(SERUM ALBUMIN)		 3bjq PHAGE-RELATED
PROTEIN
(Bordetella
bronchiseptica) 		5 / 10 LEU A 246
ILE A 168
HIS A 140
PHE A  54
GLY A 300
 None
 1.47A 2bxqA-3bjqA:
undetectable		 2bxqA-3bjqA:
20.83
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2Q5K_A_AB1A201_1
(PROTEASE)		 3bjq PHAGE-RELATED
PROTEIN
(Bordetella
bronchiseptica) 		5 / 9 ALA A  20
VAL A 290
GLY A 107
ILE A 104
VAL A  12
 None
 1.09A 2q5kA-3bjqA:
undetectable		 2q5kA-3bjqA:
17.69
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2VMY_A_FFOA505_0
(SERINE
HYDROXYMETHYLTRANSFE
RASE)		 3bjq PHAGE-RELATED
PROTEIN
(Bordetella
bronchiseptica) 		4 / 6 TYR A 264
TYR A 266
PHE A  49
PRO A 260
 None
 1.24A 2vmyA-3bjqA:
undetectable		 2vmyA-3bjqA:
23.26
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3B6H_A_MXDA551_1
(PROSTACYCLIN
SYNTHASE)		 3bjq PHAGE-RELATED
PROTEIN
(Bordetella
bronchiseptica) 		4 / 6 ALA A 119
LEU A 120
ALA A 226
THR A 225
 PG4  A 316 ( 4.0A)
None
None
None
 0.84A 3b6hA-3bjqA:
undetectable		 3b6hA-3bjqA:
20.96
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3B6H_B_MXDB551_1
(PROSTACYCLIN
SYNTHASE)		 3bjq PHAGE-RELATED
PROTEIN
(Bordetella
bronchiseptica) 		4 / 6 ALA A 119
LEU A 120
ALA A 226
THR A 225
 PG4  A 316 ( 4.0A)
None
None
None
 0.83A 3b6hB-3bjqA:
undetectable		 3b6hB-3bjqA:
20.96
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3S3M_A_DLUA398_1
(PFV INTEGRASE)		 3bjq PHAGE-RELATED
PROTEIN
(Bordetella
bronchiseptica) 		4 / 8 ASP A 309
ASP A 243
GLY A 241
PRO A 133
 None
 1.00A 3s3mA-3bjqA:
undetectable		 3s3mA-3bjqA:
22.73
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3SUE_C_SUEC1201_2
(NS3 PROTEASE, NS4A
PROTEIN)		 3bjq PHAGE-RELATED
PROTEIN
(Bordetella
bronchiseptica) 		4 / 5 TYR A 248
ILE A 209
LEU A 212
LYS A 213
 None
 0.90A 3sueC-3bjqA:
undetectable		 3sueC-3bjqA:
22.47
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4DV1_A_SRYA1601_1
(16S RRNA
RIBOSOMAL PROTEIN
S12)		 3bjq PHAGE-RELATED
PROTEIN
(Bordetella
bronchiseptica) 		3 / 3 LYS A  32
LYS A  31
PRO A  35
 None
PG4  A 316 (-2.9A)
None
 1.12A 4dv1L-3bjqA:
undetectable		 4dv1L-3bjqA:
17.76
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4J7U_D_YTZD802_1
(SEPIAPTERIN
REDUCTASE)		 3bjq PHAGE-RELATED
PROTEIN
(Bordetella
bronchiseptica) 		4 / 8 SER A 299
LEU A 298
PHE A  34
TYR A 264
 None
 1.14A 4j7uD-3bjqA:
undetectable		 4j7uD-3bjqA:
23.51
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5BPH_A_ACTA403_0
(D-ALANINE--D-ALANINE
LIGASE)		 3bjq PHAGE-RELATED
PROTEIN
(Bordetella
bronchiseptica) 		4 / 6 TYR A 136
GLY A 263
SER A 299
LEU A 298
 None
 1.14A 5bphA-3bjqA:
undetectable		 5bphA-3bjqA:
24.63
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5BPH_C_ACTC403_0
(D-ALANINE--D-ALANINE
LIGASE)		 3bjq PHAGE-RELATED
PROTEIN
(Bordetella
bronchiseptica) 		4 / 4 TYR A 136
GLY A 263
SER A 299
LEU A 298
 None
 1.12A 5bphC-3bjqA:
undetectable		 5bphC-3bjqA:
24.63
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5BPH_D_ACTD403_0
(D-ALANINE--D-ALANINE
LIGASE)		 3bjq PHAGE-RELATED
PROTEIN
(Bordetella
bronchiseptica) 		4 / 6 TYR A 136
GLY A 263
SER A 299
LEU A 298
 None
 1.21A 5bphD-3bjqA:
undetectable		 5bphD-3bjqA:
24.63