SIMILAR PATTERN OF AMINO ACIDS MAPPED TO '3c3m'

List of Similar Pattern of Amino Acids

Hit pattern: 3D amino acid arrangements similar to known drug binding site
Query pattern: Residues from known binding site for annotated drug that match the hit pattern

(Click on the DrReposER ID to view details on interfaces and similar patterns of amino acids)
(Click on the view link on the last column to view superposed patterns of amino acids)
Filter list by:
DrReposER ID / Desc. Hit
PDBID		 Hit
Macromolecule		 Res.
Matches		 Interface HETATM RMSD Dali
Z-score		 Seq.
Identity (%)		 View Dock
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2VQ5_B_LDPB1197_1
(S-NORCOCLAURINE
SYNTHASE)		 3c3m RESPONSE REGULATOR
RECEIVER PROTEIN
(Methanoculleus
marisnigri) 		4 / 7 LEU A  51
LEU A  82
LEU A  22
PRO A 106
 None
 0.96A 2vq5B-3c3mA:
undetectable		 2vq5B-3c3mA:
23.76
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2ZIF_B_SAMB298_1
(PUTATIVE
MODIFICATION
METHYLASE)		 3c3m RESPONSE REGULATOR
RECEIVER PROTEIN
(Methanoculleus
marisnigri) 		3 / 3 ASP A  10
THR A  45
GLU A  37
 None
GOL  A 202 (-3.7A)
None
 0.79A 2zifB-3c3mA:
undetectable		 2zifB-3c3mA:
19.19
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3SFE_C_TMGC1_1
(SUCCINATE
DEHYDROGENASE
[UBIQUINONE]
IRON-SULFUR SUBUNIT,
MITOCHONDRIAL
SUCCINATE
DEHYDROGENASE
CYTOCHROME B560
SUBUNIT,
MITOCHONDRIAL)		 3c3m RESPONSE REGULATOR
RECEIVER PROTEIN
(Methanoculleus
marisnigri) 		4 / 8 PRO A 106
ILE A  14
MET A  13
SER A  11
 None
GOL  A 201 (-4.5A)
None
GOL  A 201 (-2.7A)
 1.10A 3sfeB-3c3mA:
undetectable
3sfeC-3c3mA:
undetectable		 3sfeB-3c3mA:
17.79
3sfeC-3c3mA:
25.83
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3V81_A_NVPA901_1
(HIV-1 REVERSE
TRANSCRIPTASE P66
SUBUNIT)		 3c3m RESPONSE REGULATOR
RECEIVER PROTEIN
(Methanoculleus
marisnigri) 		4 / 8 LEU A  51
VAL A  19
TYR A  27
LEU A  49
 None
 1.11A 3v81A-3c3mA:
undetectable		 3v81A-3c3mA:
12.84
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5NFP_A_8W5A804_2
(GLUCOCORTICOID
RECEPTOR)		 3c3m RESPONSE REGULATOR
RECEIVER PROTEIN
(Methanoculleus
marisnigri) 		4 / 4 LEU A  65
MET A  59
ILE A  77
LEU A  39
 None
 1.27A 5nfpA-3c3mA:
undetectable		 5nfpA-3c3mA:
16.90