SIMILAR PATTERN OF AMINO ACIDS MAPPED TO '3cj8'

List of Similar Pattern of Amino Acids

Hit pattern: 3D amino acid arrangements similar to known drug binding site

Query pattern: Residues from known binding site for annotated drug that match the hit pattern


(Click on the DrReposER ID to view details on interfaces and similar patterns of amino acids)
(Click on the view link on the last column to view superposed patterns of amino acids)
Filter list by:
DrReposER ID / Desc. Hit
PDBID
Hit
Macromolecule
Res.
Matches
Interface HETATM RMSD Dali
Z-score
Seq.
Identity (%)
View Dock
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1GMK_A_DVAA6_0
(GRAMICIDIN A)
3cj8 2,3,4,5-TETRAHYDROPY
RIDINE-2,6-DICARBOXY
LATE
N-ACETYLTRANSFERASE

(Enterococcus
faecalis)
3 / 3 ALA A  74
VAL A  19
TRP A  51
None
0.91A 1gmkA-3cj8A:
undetectable
1gmkB-3cj8A:
undetectable
1gmkA-3cj8A:
7.96
1gmkB-3cj8A:
7.96
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1GMK_C_DVAC6_0
(GRAMICIDIN A)
3cj8 2,3,4,5-TETRAHYDROPY
RIDINE-2,6-DICARBOXY
LATE
N-ACETYLTRANSFERASE

(Enterococcus
faecalis)
3 / 3 ALA A  74
VAL A  19
TRP A  51
None
0.93A 1gmkC-3cj8A:
undetectable
1gmkD-3cj8A:
undetectable
1gmkC-3cj8A:
7.96
1gmkD-3cj8A:
7.96
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1HXB_A_ROCA100_1
(HIV-1 PROTEASE)
3cj8 2,3,4,5-TETRAHYDROPY
RIDINE-2,6-DICARBOXY
LATE
N-ACETYLTRANSFERASE

(Enterococcus
faecalis)
5 / 12 GLY A 112
ALA A 113
ILE A 145
GLY A 146
ILE A 109
None
0.84A 1hxbA-3cj8A:
undetectable
1hxbA-3cj8A:
21.25
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1HXB_A_ROCA100_1
(HIV-1 PROTEASE)
3cj8 2,3,4,5-TETRAHYDROPY
RIDINE-2,6-DICARBOXY
LATE
N-ACETYLTRANSFERASE

(Enterococcus
faecalis)
5 / 12 GLY A 130
ALA A 131
ILE A 171
GLY A 172
ILE A 127
None
0.75A 1hxbA-3cj8A:
undetectable
1hxbA-3cj8A:
21.25
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2AVS_B_MK1B902_1
(POL POLYPROTEIN)
3cj8 2,3,4,5-TETRAHYDROPY
RIDINE-2,6-DICARBOXY
LATE
N-ACETYLTRANSFERASE

(Enterococcus
faecalis)
5 / 12 GLY A 112
ALA A 113
ILE A 145
GLY A 146
ILE A 109
None
0.83A 2avsA-3cj8A:
undetectable
2avsA-3cj8A:
21.67
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2AVS_B_MK1B902_1
(POL POLYPROTEIN)
3cj8 2,3,4,5-TETRAHYDROPY
RIDINE-2,6-DICARBOXY
LATE
N-ACETYLTRANSFERASE

(Enterococcus
faecalis)
5 / 12 GLY A 130
ALA A 131
ILE A 171
GLY A 172
ILE A 127
None
0.76A 2avsA-3cj8A:
undetectable
2avsA-3cj8A:
21.67
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2AVV_A_MK1A901_1
(POL POLYPROTEIN)
3cj8 2,3,4,5-TETRAHYDROPY
RIDINE-2,6-DICARBOXY
LATE
N-ACETYLTRANSFERASE

(Enterococcus
faecalis)
5 / 12 GLY A 130
ALA A 131
ILE A 171
GLY A 172
ILE A 127
None
0.79A 2avvA-3cj8A:
undetectable
2avvA-3cj8A:
21.67
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2AVV_E_MK1E902_1
(POL POLYPROTEIN)
3cj8 2,3,4,5-TETRAHYDROPY
RIDINE-2,6-DICARBOXY
LATE
N-ACETYLTRANSFERASE

(Enterococcus
faecalis)
5 / 12 GLY A 112
ALA A 113
ILE A 145
GLY A 146
ILE A 109
None
0.86A 2avvD-3cj8A:
undetectable
2avvD-3cj8A:
21.67
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2AVV_E_MK1E902_1
(POL POLYPROTEIN)
3cj8 2,3,4,5-TETRAHYDROPY
RIDINE-2,6-DICARBOXY
LATE
N-ACETYLTRANSFERASE

(Enterococcus
faecalis)
5 / 12 GLY A 130
ALA A 131
ILE A 171
GLY A 172
ILE A 127
None
0.77A 2avvD-3cj8A:
undetectable
2avvD-3cj8A:
21.67
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3CYX_A_ROCA201_3
(HIV-1 PROTEASE)
3cj8 2,3,4,5-TETRAHYDROPY
RIDINE-2,6-DICARBOXY
LATE
N-ACETYLTRANSFERASE

(Enterococcus
faecalis)
5 / 12 GLY A 112
ALA A 113
ILE A 145
GLY A 146
ILE A 109
None
0.86A 3cyxB-3cj8A:
undetectable
3cyxB-3cj8A:
21.67
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3CYX_A_ROCA201_3
(HIV-1 PROTEASE)
3cj8 2,3,4,5-TETRAHYDROPY
RIDINE-2,6-DICARBOXY
LATE
N-ACETYLTRANSFERASE

(Enterococcus
faecalis)
5 / 12 GLY A 130
ALA A 131
ILE A 171
GLY A 172
ILE A 127
None
0.78A 3cyxB-3cj8A:
undetectable
3cyxB-3cj8A:
21.67
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3DH0_B_SAMB300_0
(SAM DEPENDENT
METHYLTRANSFERASE)
3cj8 2,3,4,5-TETRAHYDROPY
RIDINE-2,6-DICARBOXY
LATE
N-ACETYLTRANSFERASE

(Enterococcus
faecalis)
5 / 12 GLY A 192
VAL A 195
ALA A 147
THR A 149
LEU A 151
ACT  A 316 (-3.4A)
None
None
None
None
1.11A 3dh0B-3cj8A:
undetectable
3dh0B-3cj8A:
23.08
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3FI0_L_TRPL1001_0
(TRYPTOPHANYL-TRNA
SYNTHETASE)
3cj8 2,3,4,5-TETRAHYDROPY
RIDINE-2,6-DICARBOXY
LATE
N-ACETYLTRANSFERASE

(Enterococcus
faecalis)
5 / 9 GLY A 186
ASP A 218
ILE A 216
VAL A 188
VAL A 170
None
1.34A 3fi0L-3cj8A:
undetectable
3fi0L-3cj8A:
21.36
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3FI0_M_TRPM1001_0
(TRYPTOPHANYL-TRNA
SYNTHETASE)
3cj8 2,3,4,5-TETRAHYDROPY
RIDINE-2,6-DICARBOXY
LATE
N-ACETYLTRANSFERASE

(Enterococcus
faecalis)
5 / 9 GLY A 186
ASP A 218
ILE A 216
VAL A 188
VAL A 170
None
1.35A 3fi0M-3cj8A:
undetectable
3fi0M-3cj8A:
21.36
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3KP6_B_SALB3008_1
(TRANSCRIPTIONAL
REGULATOR TCAR)
3cj8 2,3,4,5-TETRAHYDROPY
RIDINE-2,6-DICARBOXY
LATE
N-ACETYLTRANSFERASE

(Enterococcus
faecalis)
4 / 7 GLU A 197
VAL A 181
VAL A 205
ALA A 210
None
1.06A 3kp6B-3cj8A:
undetectable
3kp6B-3cj8A:
20.50
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3KU1_A_SAMA226_0
(SAM-DEPENDENT
METHYLTRANSFERASE)
3cj8 2,3,4,5-TETRAHYDROPY
RIDINE-2,6-DICARBOXY
LATE
N-ACETYLTRANSFERASE

(Enterococcus
faecalis)
5 / 12 GLY A 172
VAL A 189
ALA A 147
GLY A 148
LEU A 151
None
None
None
MG  A 301 ( 4.3A)
None
0.90A 3ku1A-3cj8A:
undetectable
3ku1A-3cj8A:
25.19
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3KU1_C_SAMC226_0
(SAM-DEPENDENT
METHYLTRANSFERASE)
3cj8 2,3,4,5-TETRAHYDROPY
RIDINE-2,6-DICARBOXY
LATE
N-ACETYLTRANSFERASE

(Enterococcus
faecalis)
5 / 12 GLY A 172
VAL A 189
ALA A 147
GLY A 148
LEU A 151
None
None
None
MG  A 301 ( 4.3A)
None
0.90A 3ku1C-3cj8A:
undetectable
3ku1C-3cj8A:
25.19
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4C5L_A_UEGA300_1
(PHOSPHOMETHYLPYRIMID
INE KINASE)
3cj8 2,3,4,5-TETRAHYDROPY
RIDINE-2,6-DICARBOXY
LATE
N-ACETYLTRANSFERASE

(Enterococcus
faecalis)
5 / 11 GLY A 153
ALA A 119
GLY A 135
VAL A 163
VAL A 132
CL  A 304 (-3.5A)
None
CL  A 304 (-4.0A)
None
None
1.23A 4c5lA-3cj8A:
undetectable
4c5lA-3cj8A:
22.70
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4C5L_B_PXLB300_1
(PHOSPHOMETHYLPYRIMID
INE KINASE)
3cj8 2,3,4,5-TETRAHYDROPY
RIDINE-2,6-DICARBOXY
LATE
N-ACETYLTRANSFERASE

(Enterococcus
faecalis)
5 / 9 GLY A 153
ALA A 119
GLY A 135
VAL A 163
VAL A 132
CL  A 304 (-3.5A)
None
CL  A 304 (-4.0A)
None
None
1.29A 4c5lB-3cj8A:
undetectable
4c5lB-3cj8A:
22.70
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4C5L_C_UEGC300_1
(PHOSPHOMETHYLPYRIMID
INE KINASE)
3cj8 2,3,4,5-TETRAHYDROPY
RIDINE-2,6-DICARBOXY
LATE
N-ACETYLTRANSFERASE

(Enterococcus
faecalis)
5 / 10 GLY A 153
ALA A 119
GLY A 135
VAL A 163
VAL A 132
CL  A 304 (-3.5A)
None
CL  A 304 (-4.0A)
None
None
1.24A 4c5lC-3cj8A:
undetectable
4c5lC-3cj8A:
22.70
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4C5L_D_UEGD300_1
(PHOSPHOMETHYLPYRIMID
INE KINASE)
3cj8 2,3,4,5-TETRAHYDROPY
RIDINE-2,6-DICARBOXY
LATE
N-ACETYLTRANSFERASE

(Enterococcus
faecalis)
5 / 10 GLY A 153
ALA A 119
GLY A 135
VAL A 163
VAL A 132
CL  A 304 (-3.5A)
None
CL  A 304 (-4.0A)
None
None
1.28A 4c5lD-3cj8A:
undetectable
4c5lD-3cj8A:
22.70
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4C5N_B_PXLB300_1
(PHOSPHOMETHYLPYRIMID
INE KINASE)
3cj8 2,3,4,5-TETRAHYDROPY
RIDINE-2,6-DICARBOXY
LATE
N-ACETYLTRANSFERASE

(Enterococcus
faecalis)
5 / 10 GLY A 153
ALA A 119
GLY A 135
VAL A 163
VAL A 132
CL  A 304 (-3.5A)
None
CL  A 304 (-4.0A)
None
None
1.26A 4c5nB-3cj8A:
undetectable
4c5nB-3cj8A:
22.70
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4C5N_D_UEGD300_1
(PHOSPHOMETHYLPYRIMID
INE KINASE)
3cj8 2,3,4,5-TETRAHYDROPY
RIDINE-2,6-DICARBOXY
LATE
N-ACETYLTRANSFERASE

(Enterococcus
faecalis)
5 / 10 GLY A 153
ALA A 119
GLY A 135
VAL A 163
VAL A 132
CL  A 304 (-3.5A)
None
CL  A 304 (-4.0A)
None
None
1.18A 4c5nD-3cj8A:
undetectable
4c5nD-3cj8A:
22.70
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4NKX_B_STRB601_1
(STEROID
17-ALPHA-HYDROXYLASE
/17,20 LYASE)
3cj8 2,3,4,5-TETRAHYDROPY
RIDINE-2,6-DICARBOXY
LATE
N-ACETYLTRANSFERASE

(Enterococcus
faecalis)
6 / 12 ALA A 175
GLY A 207
ALA A 210
ALA A 187
ILE A 171
VAL A 204
None
FMT  A 311 ( 4.4A)
None
None
None
None
1.33A 4nkxB-3cj8A:
undetectable
4nkxB-3cj8A:
21.92
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5DZK_3_BEZ3801_0
(ATP-DEPENDENT CLP
PROTEASE PROTEOLYTIC
SUBUNIT 1
BEZ-LEU-LEU)
3cj8 2,3,4,5-TETRAHYDROPY
RIDINE-2,6-DICARBOXY
LATE
N-ACETYLTRANSFERASE

(Enterococcus
faecalis)
4 / 4 LEU A  96
ILE A  97
GLY A  94
ILE A  91
None
0.88A 5dzk3-3cj8A:
undetectable
5dzkm-3cj8A:
undetectable
5dzk3-3cj8A:
0.85
5dzkm-3cj8A:
24.18
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5DZK_Y_BEZY801_0
(ATP-DEPENDENT CLP
PROTEASE PROTEOLYTIC
SUBUNIT 1
ATP-DEPENDENT CLP
PROTEASE PROTEOLYTIC
SUBUNIT 2
BEZ-LEU-LEU)
3cj8 2,3,4,5-TETRAHYDROPY
RIDINE-2,6-DICARBOXY
LATE
N-ACETYLTRANSFERASE

(Enterococcus
faecalis)
4 / 5 ILE A  97
GLY A  94
ILE A  91
LEU A  96
None
0.88A 5dzkd-3cj8A:
undetectable
5dzkk-3cj8A:
undetectable
5dzky-3cj8A:
undetectable
5dzkd-3cj8A:
24.90
5dzkk-3cj8A:
24.18
5dzky-3cj8A:
0.85
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5DZK_Z_BEZZ801_0
(ATP-DEPENDENT CLP
PROTEASE PROTEOLYTIC
SUBUNIT 1
BEZ-LEU-LEU)
3cj8 2,3,4,5-TETRAHYDROPY
RIDINE-2,6-DICARBOXY
LATE
N-ACETYLTRANSFERASE

(Enterococcus
faecalis)
4 / 4 ILE A  97
GLY A  94
ILE A  91
LEU A  96
None
0.87A 5dzkl-3cj8A:
undetectable
5dzkz-3cj8A:
undetectable
5dzkl-3cj8A:
24.18
5dzkz-3cj8A:
0.85
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5LG3_A_Z80A401_1
(GAMMA-AMINOBUTYRIC-A
CID RECEPTOR SUBUNIT
BETA-1)
3cj8 2,3,4,5-TETRAHYDROPY
RIDINE-2,6-DICARBOXY
LATE
N-ACETYLTRANSFERASE

(Enterococcus
faecalis)
6 / 11 ILE A 165
ILE A 171
VAL A 139
THR A 125
ILE A 127
ALA A 131
None
0.95A 5lg3A-3cj8A:
undetectable
5lg3A-3cj8A:
19.81
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5LG3_E_Z80E401_1
(GAMMA-AMINOBUTYRIC-A
CID RECEPTOR SUBUNIT
BETA-1)
3cj8 2,3,4,5-TETRAHYDROPY
RIDINE-2,6-DICARBOXY
LATE
N-ACETYLTRANSFERASE

(Enterococcus
faecalis)
6 / 12 ILE A 165
ILE A 171
VAL A 139
THR A 125
ILE A 127
ALA A 131
None
0.94A 5lg3E-3cj8A:
undetectable
5lg3E-3cj8A:
19.81
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5LG3_F_Z80F401_1
(GAMMA-AMINOBUTYRIC-A
CID RECEPTOR SUBUNIT
BETA-1)
3cj8 2,3,4,5-TETRAHYDROPY
RIDINE-2,6-DICARBOXY
LATE
N-ACETYLTRANSFERASE

(Enterococcus
faecalis)
5 / 10 ILE A 165
ILE A 171
VAL A 139
THR A 125
ILE A 127
None
0.94A 5lg3F-3cj8A:
undetectable
5lg3F-3cj8A:
19.81
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5LG3_G_Z80G401_1
(GAMMA-AMINOBUTYRIC-A
CID RECEPTOR SUBUNIT
BETA-1)
3cj8 2,3,4,5-TETRAHYDROPY
RIDINE-2,6-DICARBOXY
LATE
N-ACETYLTRANSFERASE

(Enterococcus
faecalis)
5 / 10 ILE A 165
ILE A 171
VAL A 139
THR A 125
ILE A 127
None
0.96A 5lg3G-3cj8A:
undetectable
5lg3G-3cj8A:
19.81
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5LG3_H_Z80H401_1
(GAMMA-AMINOBUTYRIC-A
CID RECEPTOR SUBUNIT
BETA-1)
3cj8 2,3,4,5-TETRAHYDROPY
RIDINE-2,6-DICARBOXY
LATE
N-ACETYLTRANSFERASE

(Enterococcus
faecalis)
5 / 10 ILE A 165
ILE A 171
VAL A 139
THR A 125
ILE A 127
None
0.97A 5lg3H-3cj8A:
undetectable
5lg3H-3cj8A:
19.81
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5LG3_J_Z80J401_1
(GAMMA-AMINOBUTYRIC-A
CID RECEPTOR SUBUNIT
BETA-1)
3cj8 2,3,4,5-TETRAHYDROPY
RIDINE-2,6-DICARBOXY
LATE
N-ACETYLTRANSFERASE

(Enterococcus
faecalis)
5 / 12 ILE A 165
ILE A 171
VAL A 139
THR A 125
ILE A 127
None
0.97A 5lg3J-3cj8A:
undetectable
5lg3J-3cj8A:
19.81