SIMILAR PATTERN OF AMINO ACIDS MAPPED TO '3d3s'

List of Similar Pattern of Amino Acids

Hit pattern: 3D amino acid arrangements similar to known drug binding site
Query pattern: Residues from known binding site for annotated drug that match the hit pattern

(Click on the DrReposER ID to view details on interfaces and similar patterns of amino acids)
(Click on the view link on the last column to view superposed patterns of amino acids)
Filter list by:
DrReposER ID / Desc. Hit
PDBID		 Hit
Macromolecule		 Res.
Matches		 Interface HETATM RMSD Dali
Z-score		 Seq.
Identity (%)		 View Dock
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1MZ9_D_VDYD1001_4
(CARTILAGE OLIGOMERIC
MATRIX PROTEIN)		 3d3s L-2,4-DIAMINOBUTYRIC
ACID
ACETYLTRANSFERASE
(Bordetella
parapertussis) 		4 / 4 THR A  65
LEU A  63
VAL A  69
LEU A 106
 None
 0.87A 1mz9D-3d3sA:
undetectable		 1mz9D-3d3sA:
13.07
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2AVD_A_SAMA501_0
(CATECHOL-O-METHYLTRA
NSFERASE)		 3d3s L-2,4-DIAMINOBUTYRIC
ACID
ACETYLTRANSFERASE
(Bordetella
parapertussis) 		5 / 12 GLY A  56
PHE A  57
ALA A  81
ALA A  47
ARG A   5
 None
 1.34A 2avdA-3d3sA:
undetectable		 2avdA-3d3sA:
22.92
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2F8D_A_BEZA1001_0
(HTH-TYPE
TRANSCRIPTIONAL
REGULATOR BENM)		 3d3s L-2,4-DIAMINOBUTYRIC
ACID
ACETYLTRANSFERASE
(Bordetella
parapertussis) 		4 / 6 SER A  49
ARG A  53
LEU A  18
HIS A  78
 SO4  A 165 (-2.7A)
SO4  A 165 (-3.3A)
GOL  A 168 (-4.1A)
GOL  A 168 (-4.1A)
 1.27A 2f8dA-3d3sA:
undetectable		 2f8dA-3d3sA:
25.79
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3KU1_A_SAMA226_0
(SAM-DEPENDENT
METHYLTRANSFERASE)		 3d3s L-2,4-DIAMINOBUTYRIC
ACID
ACETYLTRANSFERASE
(Bordetella
parapertussis) 		5 / 12 ARG A 128
GLY A  87
GLY A  56
GLY A  92
LEU A   4
 None
 0.93A 3ku1A-3d3sA:
undetectable		 3ku1A-3d3sA:
23.53
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3P73_A_ACTA275_0
(MHC RFP-Y CLASS I
ALPHA CHAIN)		 3d3s L-2,4-DIAMINOBUTYRIC
ACID
ACETYLTRANSFERASE
(Bordetella
parapertussis) 		3 / 3 ILE A  54
VAL A  46
ARG A   5
 None
 0.63A 3p73A-3d3sA:
undetectable		 3p73A-3d3sA:
21.13
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3S3O_A_DLUA399_1
(PFV INTEGRASE)		 3d3s L-2,4-DIAMINOBUTYRIC
ACID
ACETYLTRANSFERASE
(Bordetella
parapertussis) 		4 / 7 ASP A 139
ASP A 150
PRO A 136
GLN A 135
 None
 1.28A 3s3oA-3d3sA:
undetectable		 3s3oA-3d3sA:
18.31
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4IQQ_A_D16A402_1
(THYMIDYLATE SYNTHASE)		 3d3s L-2,4-DIAMINOBUTYRIC
ACID
ACETYLTRANSFERASE
(Bordetella
parapertussis) 		5 / 7 TYR A  33
ASP A  55
LEU A  18
GLY A  56
PHE A  57
 None
GOL  A 168 (-4.0A)
GOL  A 168 (-4.1A)
None
None
 1.48A 4iqqA-3d3sA:
undetectable		 4iqqA-3d3sA:
21.66
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5DZK_R_BEZR801_1
(ATP-DEPENDENT CLP
PROTEASE PROTEOLYTIC
SUBUNIT 2
BEZ-LEU-LEU)		 3d3s L-2,4-DIAMINOBUTYRIC
ACID
ACETYLTRANSFERASE
(Bordetella
parapertussis) 		4 / 8 PHE A  71
ALA A  60
LEU A  62
LEU A  63
 None
 1.16A 5dzkd-3d3sA:
undetectable
5dzkr-3d3sA:
undetectable		 5dzkd-3d3sA:
23.35
5dzkr-3d3sA:
2.27
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5IKT_A_TLFA601_1
(PROSTAGLANDIN G/H
SYNTHASE 2)		 3d3s L-2,4-DIAMINOBUTYRIC
ACID
ACETYLTRANSFERASE
(Bordetella
parapertussis) 		3 / 3 LEU A  25
TYR A  33
SER A  59
 None
 0.90A 5iktA-3d3sA:
undetectable		 5iktA-3d3sA:
16.12