SIMILAR PATTERN OF AMINO ACIDS MAPPED TO '3d6j'

List of Similar Pattern of Amino Acids

Hit pattern: 3D amino acid arrangements similar to known drug binding site

Query pattern: Residues from known binding site for annotated drug that match the hit pattern


(Click on the DrReposER ID to view details on interfaces and similar patterns of amino acids)
(Click on the view link on the last column to view superposed patterns of amino acids)
Filter list by:
DrReposER ID / Desc. Hit
PDBID
Hit
Macromolecule
Res.
Matches
Interface HETATM RMSD Dali
Z-score
Seq.
Identity (%)
View Dock
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1A7Y_A_DVAA8_0
(ACTINOMYCIN D)
3d6j PUTATIVE HALOACID
DEHALOGENASE-LIKE
HYDROLASE

(Bacteroides
fragilis)
3 / 3 THR A  94
THR A  96
PRO A  93
None
0.85A 1a7yA-3d6jA:
undetectable
1a7yA-3d6jA:
4.52
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1A7Y_B_DVAB8_0
(ACTINOMYCIN D)
3d6j PUTATIVE HALOACID
DEHALOGENASE-LIKE
HYDROLASE

(Bacteroides
fragilis)
3 / 3 THR A  94
THR A  96
PRO A  93
None
0.87A 1a7yB-3d6jA:
undetectable
1a7yB-3d6jA:
4.52
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1DSC_C_DVAC8_0
(ACTINOMYCIN D)
3d6j PUTATIVE HALOACID
DEHALOGENASE-LIKE
HYDROLASE

(Bacteroides
fragilis)
3 / 3 THR A  94
THR A  96
PRO A  93
None
0.82A 1dscC-3d6jA:
undetectable
1dscC-3d6jA:
4.52
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1I3W_H_DVAH8_0
(ACTINOMYCIN D)
3d6j PUTATIVE HALOACID
DEHALOGENASE-LIKE
HYDROLASE

(Bacteroides
fragilis)
3 / 3 THR A  94
THR A  96
PRO A  93
None
0.87A 1i3wH-3d6jA:
undetectable
1i3wH-3d6jA:
4.52
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1PKV_A_RBFA100_1
(RIBOFLAVIN SYNTHASE
ALPHA CHAIN)
3d6j PUTATIVE HALOACID
DEHALOGENASE-LIKE
HYDROLASE

(Bacteroides
fragilis)
5 / 11 LEU A  57
THR A  58
THR A  45
ILE A  46
VAL A  22
None
1.20A 1pkvA-3d6jA:
undetectable
1pkvB-3d6jA:
undetectable
1pkvA-3d6jA:
17.27
1pkvB-3d6jA:
17.27
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1PKV_B_RBFB101_1
(RIBOFLAVIN SYNTHASE
ALPHA CHAIN)
3d6j PUTATIVE HALOACID
DEHALOGENASE-LIKE
HYDROLASE

(Bacteroides
fragilis)
5 / 11 VAL A  22
LEU A  57
THR A  58
THR A  45
ILE A  46
None
1.24A 1pkvA-3d6jA:
undetectable
1pkvB-3d6jA:
undetectable
1pkvA-3d6jA:
17.27
1pkvB-3d6jA:
17.27
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1QFI_B_DVAB8_0
(ACTINOMYCIN X2)
3d6j PUTATIVE HALOACID
DEHALOGENASE-LIKE
HYDROLASE

(Bacteroides
fragilis)
3 / 3 THR A  94
THR A  96
PRO A  93
None
0.86A 1qfiB-3d6jA:
undetectable
1qfiB-3d6jA:
4.52
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1UNJ_L_DVAL2_0
(7-AMINO-ACTINOMYCIN
D)
3d6j PUTATIVE HALOACID
DEHALOGENASE-LIKE
HYDROLASE

(Bacteroides
fragilis)
3 / 3 THR A  96
PRO A  93
THR A  94
None
0.87A 1unjL-3d6jA:
undetectable
1unjL-3d6jA:
4.52
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1UNJ_L_DVAL8_0
(7-AMINO-ACTINOMYCIN
D)
3d6j PUTATIVE HALOACID
DEHALOGENASE-LIKE
HYDROLASE

(Bacteroides
fragilis)
3 / 3 THR A  94
THR A  96
PRO A  93
None
0.84A 1unjL-3d6jA:
undetectable
1unjL-3d6jA:
4.52
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1UNJ_R_DVAR8_0
(7-AMINO-ACTINOMYCIN
D)
3d6j PUTATIVE HALOACID
DEHALOGENASE-LIKE
HYDROLASE

(Bacteroides
fragilis)
3 / 3 THR A  94
THR A  96
PRO A  93
None
0.84A 1unjR-3d6jA:
undetectable
1unjR-3d6jA:
4.52
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1UNJ_W_DVAW8_0
(7-AMINO-ACTINOMYCIN
D)
3d6j PUTATIVE HALOACID
DEHALOGENASE-LIKE
HYDROLASE

(Bacteroides
fragilis)
3 / 3 THR A  94
THR A  96
PRO A  93
None
0.81A 1unjW-3d6jA:
undetectable
1unjW-3d6jA:
4.52
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1UNJ_X_DVAX2_0
(7-AMINO-ACTINOMYCIN
D)
3d6j PUTATIVE HALOACID
DEHALOGENASE-LIKE
HYDROLASE

(Bacteroides
fragilis)
3 / 3 THR A  96
PRO A  93
THR A  94
None
0.84A 1unjX-3d6jA:
undetectable
1unjX-3d6jA:
4.52
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1UNJ_X_DVAX8_0
(7-AMINO-ACTINOMYCIN
D)
3d6j PUTATIVE HALOACID
DEHALOGENASE-LIKE
HYDROLASE

(Bacteroides
fragilis)
3 / 3 THR A  94
THR A  96
PRO A  93
None
0.82A 1unjX-3d6jA:
undetectable
1unjX-3d6jA:
4.52
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1UNM_E_DVAE2_0
(7-AMINOACTINOMYCIN D)
3d6j PUTATIVE HALOACID
DEHALOGENASE-LIKE
HYDROLASE

(Bacteroides
fragilis)
3 / 3 THR A  96
PRO A  93
THR A  94
None
0.83A 1unmE-3d6jA:
undetectable
1unmE-3d6jA:
4.52
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1UNM_E_DVAE8_0
(7-AMINOACTINOMYCIN D)
3d6j PUTATIVE HALOACID
DEHALOGENASE-LIKE
HYDROLASE

(Bacteroides
fragilis)
3 / 3 THR A  94
THR A  96
PRO A  93
None
0.80A 1unmE-3d6jA:
undetectable
1unmE-3d6jA:
4.52
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1UNM_F_DVAF2_0
(7-AMINOACTINOMYCIN D)
3d6j PUTATIVE HALOACID
DEHALOGENASE-LIKE
HYDROLASE

(Bacteroides
fragilis)
3 / 3 THR A  96
PRO A  93
THR A  94
None
0.87A 1unmF-3d6jA:
undetectable
1unmF-3d6jA:
4.52
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1UNM_F_DVAF8_0
(7-AMINOACTINOMYCIN D)
3d6j PUTATIVE HALOACID
DEHALOGENASE-LIKE
HYDROLASE

(Bacteroides
fragilis)
3 / 3 THR A  94
THR A  96
PRO A  93
None
0.82A 1unmF-3d6jA:
undetectable
1unmF-3d6jA:
4.52
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2EJ3_B_GBNB914_1
(BRANCHED-CHAIN AMINO
ACID
AMINOTRANSFERASE)
3d6j PUTATIVE HALOACID
DEHALOGENASE-LIKE
HYDROLASE

(Bacteroides
fragilis)
5 / 10 TYR A 164
GLY A 173
THR A 174
ALA A 175
ALA A 176
None
1.11A 2ej3B-3d6jA:
undetectable
2ej3B-3d6jA:
20.37
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2EJ3_C_GBNC1414_1
(BRANCHED-CHAIN AMINO
ACID
AMINOTRANSFERASE)
3d6j PUTATIVE HALOACID
DEHALOGENASE-LIKE
HYDROLASE

(Bacteroides
fragilis)
5 / 8 TYR A 164
GLY A 173
THR A 174
ALA A 175
ALA A 176
None
1.05A 2ej3C-3d6jA:
undetectable
2ej3C-3d6jA:
20.37
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3AX9_A_SALA1341_1
(XANTHINE
DEHYDROGENASE/OXIDAS
E)
3d6j PUTATIVE HALOACID
DEHALOGENASE-LIKE
HYDROLASE

(Bacteroides
fragilis)
4 / 8 LEU A  50
SER A  53
PHE A  25
THR A  45
None
0.94A 3ax9A-3d6jA:
undetectable
3ax9A-3d6jA:
10.38
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3BU1_A_HSMA301_1
(LIPOCALIN)
3d6j PUTATIVE HALOACID
DEHALOGENASE-LIKE
HYDROLASE

(Bacteroides
fragilis)
4 / 7 SER A  17
TYR A  73
ILE A  21
ASP A  11
None
None
None
PO4  A 251 (-3.5A)
1.10A 3bu1A-3d6jA:
undetectable
3bu1A-3d6jA:
21.03
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3EQM_A_ASDA601_1
(CYTOCHROME P450 19A1)
3d6j PUTATIVE HALOACID
DEHALOGENASE-LIKE
HYDROLASE

(Bacteroides
fragilis)
5 / 10 ILE A 132
PHE A 129
ILE A 108
MET A 124
LEU A  14
None
1.22A 3eqmA-3d6jA:
undetectable
3eqmA-3d6jA:
19.05
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3S79_A_ASDA601_1
(CYTOCHROME P450 19A1)
3d6j PUTATIVE HALOACID
DEHALOGENASE-LIKE
HYDROLASE

(Bacteroides
fragilis)
5 / 12 ILE A 132
PHE A 129
ILE A 108
MET A 124
LEU A  14
None
1.21A 3s79A-3d6jA:
undetectable
3s79A-3d6jA:
19.05
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3W9T_C_W9TC1005_1
(HEMOLYTIC LECTIN
CEL-III)
3d6j PUTATIVE HALOACID
DEHALOGENASE-LIKE
HYDROLASE

(Bacteroides
fragilis)
3 / 3 ASP A 167
GLY A  47
TYR A  12
None
PO4  A 251 ( 3.7A)
None
0.76A 3w9tC-3d6jA:
undetectable
3w9tC-3d6jA:
21.91
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3W9T_G_W9TG503_1
(HEMOLYTIC LECTIN
CEL-III)
3d6j PUTATIVE HALOACID
DEHALOGENASE-LIKE
HYDROLASE

(Bacteroides
fragilis)
3 / 3 ASP A 167
GLY A  47
TYR A  12
None
PO4  A 251 ( 3.7A)
None
0.76A 3w9tG-3d6jA:
undetectable
3w9tG-3d6jA:
21.91
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4GC9_A_ACTA402_0
(DIMETHYLADENOSINE
TRANSFERASE 1,
MITOCHONDRIAL)
3d6j PUTATIVE HALOACID
DEHALOGENASE-LIKE
HYDROLASE

(Bacteroides
fragilis)
3 / 3 LYS A 111
TYR A 112
ARG A 115
None
1.19A 4gc9A-3d6jA:
2.2
4gc9A-3d6jA:
20.46
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4NDN_A_SAMA407_1
(S-ADENOSYLMETHIONINE
SYNTHASE ISOFORM
TYPE-2)
3d6j PUTATIVE HALOACID
DEHALOGENASE-LIKE
HYDROLASE

(Bacteroides
fragilis)
4 / 8 ALA A 157
GLU A 161
ASP A 130
ILE A 105
None
0.94A 4ndnB-3d6jA:
undetectable
4ndnB-3d6jA:
20.71
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4O5F_B_PAUB302_0
(TYPE III
PANTOTHENATE KINASE)
3d6j PUTATIVE HALOACID
DEHALOGENASE-LIKE
HYDROLASE

(Bacteroides
fragilis)
5 / 12 GLN A 209
LEU A 210
THR A 183
THR A  13
ILE A 165
None
1.27A 4o5fA-3d6jA:
undetectable
4o5fB-3d6jA:
undetectable
4o5fA-3d6jA:
19.72
4o5fB-3d6jA:
19.72
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4QD3_A_5AEA201_1
(PEPTIDYL-TRNA
HYDROLASE)
3d6j PUTATIVE HALOACID
DEHALOGENASE-LIKE
HYDROLASE

(Bacteroides
fragilis)
5 / 9 LEU A 148
GLY A 173
VAL A 180
SER A 181
LEU A 163
None
1.13A 4qd3A-3d6jA:
3.9
4qd3A-3d6jA:
22.45
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5B8H_A_PAUA302_0
(TYPE III
PANTOTHENATE KINASE)
3d6j PUTATIVE HALOACID
DEHALOGENASE-LIKE
HYDROLASE

(Bacteroides
fragilis)
5 / 12 THR A  13
ILE A 165
GLN A 209
LEU A 210
THR A 183
None
1.27A 5b8hA-3d6jA:
undetectable
5b8hB-3d6jA:
undetectable
5b8hA-3d6jA:
23.25
5b8hB-3d6jA:
23.25
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5B8H_B_PAUB302_0
(TYPE III
PANTOTHENATE KINASE)
3d6j PUTATIVE HALOACID
DEHALOGENASE-LIKE
HYDROLASE

(Bacteroides
fragilis)
5 / 12 GLN A 209
LEU A 210
THR A 183
THR A  13
ILE A 165
None
1.24A 5b8hA-3d6jA:
undetectable
5b8hB-3d6jA:
undetectable
5b8hA-3d6jA:
23.25
5b8hB-3d6jA:
23.25
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5JKV_A_ASDA602_1
(AROMATASE)
3d6j PUTATIVE HALOACID
DEHALOGENASE-LIKE
HYDROLASE

(Bacteroides
fragilis)
5 / 12 ILE A 132
PHE A 129
ILE A 108
MET A 124
LEU A  14
None
1.20A 5jkvA-3d6jA:
undetectable
5jkvA-3d6jA:
19.05
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5JKW_A_TESA601_1
(AROMATASE)
3d6j PUTATIVE HALOACID
DEHALOGENASE-LIKE
HYDROLASE

(Bacteroides
fragilis)
5 / 11 ILE A 132
PHE A 129
ILE A 108
MET A 124
LEU A  14
None
1.18A 5jkwA-3d6jA:
undetectable
5jkwA-3d6jA:
19.05
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5JL7_A_ASDA601_1
(AROMATASE)
3d6j PUTATIVE HALOACID
DEHALOGENASE-LIKE
HYDROLASE

(Bacteroides
fragilis)
5 / 10 ILE A 132
PHE A 129
ILE A 108
MET A 124
LEU A  14
None
1.21A 5jl7A-3d6jA:
undetectable
5jl7A-3d6jA:
19.05
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5M54_E_TA1E502_1
(TUBULIN BETA-2B
CHAIN)
3d6j PUTATIVE HALOACID
DEHALOGENASE-LIKE
HYDROLASE

(Bacteroides
fragilis)
5 / 12 HIS A 123
ALA A  15
PHE A  10
ARG A  19
GLY A  20
None
1.13A 5m54E-3d6jA:
undetectable
5m54E-3d6jA:
20.24
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5Y9Y_A_ACTA409_0
(UNCHARACTERIZED
PROTEIN KDOO)
3d6j PUTATIVE HALOACID
DEHALOGENASE-LIKE
HYDROLASE

(Bacteroides
fragilis)
3 / 3 LYS A 142
PRO A 143
LYS A  48
PO4  A 251 (-2.9A)
None
None
1.26A 5y9yA-3d6jA:
undetectable
5y9yA-3d6jA:
19.14
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
6EBP_C_DAHC123_0
(RIBONUCLEOSIDE-DIPHO
SPHATE REDUCTASE,
BETA SUBUNIT)
3d6j PUTATIVE HALOACID
DEHALOGENASE-LIKE
HYDROLASE

(Bacteroides
fragilis)
5 / 10 LEU A  14
THR A  13
SER A 109
ILE A 108
ILE A 116
None
None
PO4  A 251 (-2.6A)
None
None
1.17A 6ebpC-3d6jA:
undetectable
6ebpC-3d6jA:
14.80
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
6EBP_D_DAHD123_0
(RIBONUCLEOSIDE-DIPHO
SPHATE REDUCTASE,
BETA SUBUNIT)
3d6j PUTATIVE HALOACID
DEHALOGENASE-LIKE
HYDROLASE

(Bacteroides
fragilis)
5 / 10 THR A  13
SER A 109
ILE A 108
ILE A 132
ILE A 116
None
PO4  A 251 (-2.6A)
None
None
None
1.09A 6ebpD-3d6jA:
undetectable
6ebpD-3d6jA:
14.80
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
6EBZ_B_DAHB123_0
(RIBONUCLEOSIDE-DIPHO
SPHATE REDUCTASE,
BETA SUBUNIT)
3d6j PUTATIVE HALOACID
DEHALOGENASE-LIKE
HYDROLASE

(Bacteroides
fragilis)
5 / 11 THR A  13
SER A 109
ILE A 108
ILE A 132
ILE A 116
None
PO4  A 251 (-2.6A)
None
None
None
1.05A 6ebzB-3d6jA:
undetectable
6ebzB-3d6jA:
14.80