SIMILAR PATTERN OF AMINO ACIDS MAPPED TO '3djm'

List of Similar Pattern of Amino Acids

Hit pattern: 3D amino acid arrangements similar to known drug binding site
Query pattern: Residues from known binding site for annotated drug that match the hit pattern

(Click on the DrReposER ID to view details on interfaces and similar patterns of amino acids)
(Click on the view link on the last column to view superposed patterns of amino acids)
Filter list by:
DrReposER ID / Desc. Hit
PDBID		 Hit
Macromolecule		 Res.
Matches		 Interface HETATM RMSD Dali
Z-score		 Seq.
Identity (%)		 View Dock
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2JST_A_HLTA101_1
(FOUR-ALPHA-HELIX
BUNDLE)		 3djm UNCHARACTERIZED
PROTEIN DUF427
(Rhodobacter
sphaeroides) 		4 / 5 ALA A 106
TRP A  87
LEU A 103
ALA A  85
 None
 1.28A 2jstA-3djmA:
undetectable
2jstB-3djmA:
undetectable		 2jstA-3djmA:
19.66
2jstB-3djmA:
19.66
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4K50_A_ACTA506_0
(RNA POLYMERASE
3D-POL)		 3djm UNCHARACTERIZED
PROTEIN DUF427
(Rhodobacter
sphaeroides) 		3 / 3 VAL A  17
GLY A 113
LYS A 111
 None
 0.69A 4k50A-3djmA:
undetectable		 4k50A-3djmA:
13.94
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4K50_E_ACTE504_0
(RNA POLYMERASE
3D-POL)		 3djm UNCHARACTERIZED
PROTEIN DUF427
(Rhodobacter
sphaeroides) 		3 / 3 VAL A  17
GLY A 113
LYS A 111
 None
 0.63A 4k50E-3djmA:
undetectable		 4k50E-3djmA:
13.94