SIMILAR PATTERN OF AMINO ACIDS MAPPED TO '3e9u'

List of Similar Pattern of Amino Acids

Hit pattern: 3D amino acid arrangements similar to known drug binding site

Query pattern: Residues from known binding site for annotated drug that match the hit pattern


(Click on the DrReposER ID to view details on interfaces and similar patterns of amino acids)
(Click on the view link on the last column to view superposed patterns of amino acids)
Filter list by:
DrReposER ID / Desc. Hit
PDBID
Hit
Macromolecule
Res.
Matches
Interface HETATM RMSD Dali
Z-score
Seq.
Identity (%)
View Dock
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1KYV_A_RBFA501_1
(6,7-DIMETHYL-8-RIBIT
YLLUMAZINE SYNTHASE)
3e9u NA/CA EXCHANGE
PROTEIN

(Drosophila
melanogaster)
5 / 12 GLY A 606
LEU A 624
ILE A 622
HIS A 641
TRP A 592
None
1.18A 1kyvA-3e9uA:
undetectable
1kyvE-3e9uA:
undetectable
1kyvA-3e9uA:
23.63
1kyvE-3e9uA:
23.63
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1KYV_C_RBFC503_1
(6,7-DIMETHYL-8-RIBIT
YLLUMAZINE SYNTHASE)
3e9u NA/CA EXCHANGE
PROTEIN

(Drosophila
melanogaster)
5 / 12 HIS A 641
TRP A 592
GLY A 606
LEU A 624
ILE A 622
None
1.18A 1kyvB-3e9uA:
undetectable
1kyvC-3e9uA:
undetectable
1kyvB-3e9uA:
23.63
1kyvC-3e9uA:
23.63
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1KYV_D_RBFD504_1
(6,7-DIMETHYL-8-RIBIT
YLLUMAZINE SYNTHASE)
3e9u NA/CA EXCHANGE
PROTEIN

(Drosophila
melanogaster)
5 / 12 HIS A 641
TRP A 592
GLY A 606
LEU A 624
ILE A 622
None
1.17A 1kyvC-3e9uA:
undetectable
1kyvD-3e9uA:
undetectable
1kyvC-3e9uA:
23.63
1kyvD-3e9uA:
23.63
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1KYV_E_RBFE505_1
(6,7-DIMETHYL-8-RIBIT
YLLUMAZINE SYNTHASE)
3e9u NA/CA EXCHANGE
PROTEIN

(Drosophila
melanogaster)
5 / 12 HIS A 641
TRP A 592
GLY A 606
LEU A 624
ILE A 622
None
1.16A 1kyvD-3e9uA:
undetectable
1kyvE-3e9uA:
undetectable
1kyvD-3e9uA:
23.63
1kyvE-3e9uA:
23.63
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5KPR_A_PAUA404_0
(PANTOTHENATE KINASE
3)
3e9u NA/CA EXCHANGE
PROTEIN

(Drosophila
melanogaster)
4 / 5 GLY A 582
SER A 552
ARG A 681
GLY A 551
None
1.06A 5kprA-3e9uA:
undetectable
5kprA-3e9uA:
20.72