SIMILAR PATTERN OF AMINO ACIDS MAPPED TO '3emq'

List of Similar Pattern of Amino Acids

Hit pattern: 3D amino acid arrangements similar to known drug binding site
Query pattern: Residues from known binding site for annotated drug that match the hit pattern

(Click on the DrReposER ID to view details on interfaces and similar patterns of amino acids)
(Click on the view link on the last column to view superposed patterns of amino acids)
Filter list by:
DrReposER ID / Desc. Hit
PDBID		 Hit
Macromolecule		 Res.
Matches		 Interface HETATM RMSD Dali
Z-score		 Seq.
Identity (%)		 View Dock
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1KGL_A_RTLA175_0
(CELLULAR
RETINOL-BINDING
PROTEIN TYPE I)		 3emq ENDO-1,4-BETA-XYLANA
SE
(Paenibacillus
barcinonensis) 		5 / 12 ALA A 226
PRO A 218
SER A 219
ARG A 224
LEU A 242
 None
 1.27A 1kglA-3emqA:
undetectable		 1kglA-3emqA:
19.02
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1KGL_A_RTLA175_0
(CELLULAR
RETINOL-BINDING
PROTEIN TYPE I)		 3emq ENDO-1,4-BETA-XYLANA
SE
(Paenibacillus
barcinonensis) 		5 / 12 PRO A 218
SER A 219
ARG A 224
ILE A 227
LEU A 242
 None
 1.11A 1kglA-3emqA:
undetectable		 1kglA-3emqA:
19.02
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1Q97_B_ADNB486_1
(SR PROTEIN KINASE)		 3emq ENDO-1,4-BETA-XYLANA
SE
(Paenibacillus
barcinonensis) 		4 / 4 VAL A  84
ALA A 161
LEU A 197
PHE A 162
 None
 1.11A 1q97B-3emqA:
undetectable		 1q97B-3emqA:
21.59
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2CD2_A_FOLA307_0
(DIHYDROFOLATE
REDUCTASE)		 3emq ENDO-1,4-BETA-XYLANA
SE
(Paenibacillus
barcinonensis) 		5 / 12 ILE A 227
LEU A 242
ILE A 274
ILE A 285
THR A 182
 None
 1.05A 2cd2A-3emqA:
undetectable		 2cd2A-3emqA:
19.53
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2Q63_A_1UNA1001_4
(PROTEASE RETROPEPSIN)		 3emq ENDO-1,4-BETA-XYLANA
SE
(Paenibacillus
barcinonensis) 		3 / 3 ASP A 130
ASN A 133
THR A  89
 None
HAH  A1000 (-3.4A)
None
 0.80A 2q63B-3emqA:
undetectable		 2q63B-3emqA:
16.23
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2V0M_A_KLNA1501_1
(CYTOCHROME P450 3A4)		 3emq ENDO-1,4-BETA-XYLANA
SE
(Paenibacillus
barcinonensis) 		5 / 10 ASP A 130
ARG A  79
ILE A  18
ILE A 328
GLY A 211
 None
 1.25A 2v0mA-3emqA:
undetectable		 2v0mA-3emqA:
18.74
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2XKW_B_P1BB1475_2
(PEROXISOME
PROLIFERATOR-ACTIVAT
ED RECEPTOR GAMMA)		 3emq ENDO-1,4-BETA-XYLANA
SE
(Paenibacillus
barcinonensis) 		4 / 6 LEU A 277
ARG A 224
ILE A 227
ILE A 136
 None
 0.90A 2xkwB-3emqA:
undetectable		 2xkwB-3emqA:
22.92
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3BXO_A_SAMA238_1
(N,N-DIMETHYLTRANSFER
ASE)		 3emq ENDO-1,4-BETA-XYLANA
SE
(Paenibacillus
barcinonensis) 		3 / 3 TYR A 297
GLU A 241
ASP A 178
 None
HAH  A1000 (-3.0A)
None
 0.80A 3bxoA-3emqA:
undetectable		 3bxoA-3emqA:
21.11
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3BXO_B_SAMB238_1
(N,N-DIMETHYLTRANSFER
ASE)		 3emq ENDO-1,4-BETA-XYLANA
SE
(Paenibacillus
barcinonensis) 		3 / 3 TYR A 297
GLU A 241
ASP A 178
 None
HAH  A1000 (-3.0A)
None
 0.79A 3bxoB-3emqA:
undetectable		 3bxoB-3emqA:
21.11
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3CZH_A_D2VA602_2
(CYTOCHROME P450 2R1)		 3emq ENDO-1,4-BETA-XYLANA
SE
(Paenibacillus
barcinonensis) 		3 / 3 LEU A 150
GLU A 137
ILE A 143
 None
 0.56A 3czhA-3emqA:
undetectable		 3czhA-3emqA:
22.92
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3IA4_B_MTXB164_1
(DIHYDROFOLATE
REDUCTASE)		 3emq ENDO-1,4-BETA-XYLANA
SE
(Paenibacillus
barcinonensis) 		5 / 12 ILE A  67
ALA A  63
GLN A  28
ARG A  74
TYR A 122
 None
 1.30A 3ia4B-3emqA:
undetectable		 3ia4B-3emqA:
19.94
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3VYW_A_SAMA501_1
(MNMC2)		 3emq ENDO-1,4-BETA-XYLANA
SE
(Paenibacillus
barcinonensis) 		4 / 6 GLU A  44
ASP A 301
ASN A 296
GLU A  30
 HAH  A1000 ( 4.9A)
None
None
None
 1.28A 3vywA-3emqA:
undetectable		 3vywA-3emqA:
22.59
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3VYW_D_SAMD401_1
(MNMC2)		 3emq ENDO-1,4-BETA-XYLANA
SE
(Paenibacillus
barcinonensis) 		4 / 5 GLU A  44
ASP A 301
ASN A 296
GLU A  30
 HAH  A1000 ( 4.9A)
None
None
None
 1.28A 3vywD-3emqA:
undetectable		 3vywD-3emqA:
22.59
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3WRI_A_CAMA502_0
(CAMPHOR
5-MONOOXYGENASE)		 3emq ENDO-1,4-BETA-XYLANA
SE
(Paenibacillus
barcinonensis) 		4 / 5 LEU A 242
GLY A 211
THR A 182
ILE A 227
 None
 0.81A 3wriA-3emqA:
undetectable		 3wriA-3emqA:
21.57
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3WRI_B_CAMB502_0
(CAMPHOR
5-MONOOXYGENASE)		 3emq ENDO-1,4-BETA-XYLANA
SE
(Paenibacillus
barcinonensis) 		4 / 5 LEU A 242
GLY A 211
THR A 182
ILE A 227
 None
 0.82A 3wriB-3emqA:
undetectable		 3wriB-3emqA:
21.57
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4EYZ_A_CCSA109_0
(CELLULOSOME-RELATED
PROTEIN MODULE FROM
RUMINOCOCCUS
FLAVEFACIENS THAT
RESEMBLES
PAPAIN-LIKE CYSTEINE
PEPTIDASES)		 3emq ENDO-1,4-BETA-XYLANA
SE
(Paenibacillus
barcinonensis) 		4 / 8 TYR A  59
VAL A 119
HIS A 114
ILE A 115
 None
 0.99A 4eyzA-3emqA:
undetectable		 4eyzA-3emqA:
20.76
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4EYZ_B_CCSB109_0
(CELLULOSOME-RELATED
PROTEIN MODULE FROM
RUMINOCOCCUS
FLAVEFACIENS THAT
RESEMBLES
PAPAIN-LIKE CYSTEINE
PEPTIDASES)		 3emq ENDO-1,4-BETA-XYLANA
SE
(Paenibacillus
barcinonensis) 		4 / 8 TYR A  59
VAL A 119
HIS A 114
ILE A 115
 None
 0.99A 4eyzB-3emqA:
undetectable		 4eyzB-3emqA:
20.76
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4LTW_A_STRA301_2
(ANCESTRAL STEROID
RECEPTOR 2)		 3emq ENDO-1,4-BETA-XYLANA
SE
(Paenibacillus
barcinonensis) 		4 / 8 MET A 263
ALA A 264
PHE A 313
THR A 298
 None
 0.99A 4ltwA-3emqA:
undetectable		 4ltwA-3emqA:
19.88
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4O0O_A_URFA303_1
(RRNA N-GLYCOSIDASE)		 3emq ENDO-1,4-BETA-XYLANA
SE
(Paenibacillus
barcinonensis) 		4 / 5 TYR A 179
ASN A 177
TYR A 176
ILE A 190
 HAH  A1000 (-3.9A)
None
None
None
 1.31A 4o0oA-3emqA:
undetectable		 4o0oA-3emqA:
21.69
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4ZJ8_A_SUVA2001_1
(HUMAN OX1R FUSION
PROTEIN TO P.ABYSII
GLYCOGEN SYNTHASE)		 3emq ENDO-1,4-BETA-XYLANA
SE
(Paenibacillus
barcinonensis) 		5 / 12 ALA A  21
GLN A  88
GLU A  50
HIS A  23
TYR A 297
 None
 1.34A 4zj8A-3emqA:
undetectable		 4zj8A-3emqA:
20.51
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5BTI_E_LFXE101_1
(DNA GYRASE SUBUNIT A
DNA GYRASE SUBUNIT B
DNA SUBSTRATE 24-MER
GGTCATGAATGACTATGCAC
GTAA)		 3emq ENDO-1,4-BETA-XYLANA
SE
(Paenibacillus
barcinonensis) 		4 / 5 SER A  40
GLY A 208
THR A 182
GLU A 181
 None
 1.18A 5btiA-3emqA:
undetectable
5btiB-3emqA:
undetectable		 5btiA-3emqA:
22.55
5btiB-3emqA:
21.75
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5BTI_F_LFXF101_1
(DNA GYRASE SUBUNIT A
DNA GYRASE SUBUNIT B
DNA SUBSTRATE 24-MER
TTACGTGCATAGTCATTCAT
GACC)		 3emq ENDO-1,4-BETA-XYLANA
SE
(Paenibacillus
barcinonensis) 		4 / 5 SER A  40
GLY A 208
THR A 182
GLU A 181
 None
 1.16A 5btiC-3emqA:
undetectable
5btiD-3emqA:
undetectable		 5btiC-3emqA:
22.55
5btiD-3emqA:
21.75