SIMILAR PATTERN OF AMINO ACIDS MAPPED TO '3epf'

List of Similar Pattern of Amino Acids

Hit pattern: 3D amino acid arrangements similar to known drug binding site

Query pattern: Residues from known binding site for annotated drug that match the hit pattern


(Click on the DrReposER ID to view details on interfaces and similar patterns of amino acids)
(Click on the view link on the last column to view superposed patterns of amino acids)
Filter list by:
DrReposER ID / Desc. Hit
PDBID
Hit
Macromolecule
Res.
Matches
Interface HETATM RMSD Dali
Z-score
Seq.
Identity (%)
View Dock
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1J96_A_TESA903_1
(3ALPHA-HYDROXYSTEROI
D DEHYDROGENASE TYPE
3)
3epf PROTEIN VP2
(Enterovirus
C)
4 / 6 TRP 2  78
VAL 2  69
ILE 2 248
LEU 2 233
None
1.27A 1j96A-3epf2:
undetectable
1j96A-3epf2:
20.76
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1YA4_A_CTXA11_1
(CES1 PROTEIN)
3epf PROTEIN VP2
(Enterovirus
C)
4 / 8 PRO 2  56
LEU 2  91
GLY 2  90
PRO 2 254
None
0.95A 1ya4A-3epf2:
undetectable
1ya4A-3epf2:
20.54
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2A3A_A_TEPA1434_1
(CHITINASE)
3epf PROTEIN VP1
PROTEIN VP2

(Enterovirus
C)
3 / 3 TRP 2 226
THR 1 126
TYR 1 127
None
1.26A 2a3aA-3epf2:
undetectable
2a3aA-3epf2:
21.85
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2AOI_C_FRDC305_1
(POL POLYPROTEIN
PEPTIDE INHIBITOR)
3epf PROTEIN VP2
(Enterovirus
C)
4 / 5 GLY 2  93
PRO 2 268
VAL 2 267
ILE 2 265
None
0.97A 2aoiA-3epf2:
undetectable
2aoiA-3epf2:
18.00
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2EJ3_C_GBNC1414_1
(BRANCHED-CHAIN AMINO
ACID
AMINOTRANSFERASE)
3epf PROTEIN VP1
PROTEIN VP2

(Enterovirus
C)
5 / 8 TYR 2 192
ARG 1 272
GLY 2 181
ALA 2 189
ALA 2 186
None
1.42A 2ej3C-3epf2:
undetectable
2ej3C-3epf2:
23.38
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2EJF_A_ADNA2001_1
(235AA LONG
HYPOTHETICAL
BIOTIN--[ACETYL-COA-
CARBOXYLASE] LIGASE)
3epf PROTEIN VP2
(Enterovirus
C)
4 / 7 GLU 2  55
ALA 2  59
ASN 2  95
ALA 2  60
None
0.99A 2ejfA-3epf2:
undetectable
2ejfA-3epf2:
21.63
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2ZGW_A_ADNA1301_1
(BIOTIN--[ACETYL-COA-
CARBOXYLASE] LIGASE)
3epf PROTEIN VP2
(Enterovirus
C)
4 / 7 GLU 2  55
ALA 2  59
ASN 2  95
ALA 2  60
None
0.97A 2zgwA-3epf2:
undetectable
2zgwA-3epf2:
21.63
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2ZGW_B_ADNB1302_1
(BIOTIN--[ACETYL-COA-
CARBOXYLASE] LIGASE)
3epf PROTEIN VP2
(Enterovirus
C)
4 / 6 GLU 2  55
ALA 2  59
ASN 2  95
ALA 2  60
None
1.00A 2zgwB-3epf2:
undetectable
2zgwB-3epf2:
21.63
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3G1U_B_ADNB438_2
(ADENOSYLHOMOCYSTEINA
SE)
3epf PROTEIN VP1
PROTEIN VP2

(Enterovirus
C)
3 / 3 THR 1  45
GLU 1  48
HIS 2 194
None
0.83A 3g1uB-3epf1:
undetectable
3g1uB-3epf1:
19.60
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3M0W_B_P77B204_1
(PROTEIN S100-A4)
3epf PROTEIN VP2
(Enterovirus
C)
4 / 6 MET 2 130
CYH 2 131
PHE 2 173
PHE 2 156
None
1.35A 3m0wB-3epf2:
undetectable
3m0wJ-3epf2:
undetectable
3m0wB-3epf2:
16.35
3m0wJ-3epf2:
16.35
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3OZW_B_KKKB413_1
(FLAVOHEMOGLOBIN)
3epf PROTEIN VP1
(Enterovirus
C)
5 / 12 ILE 1  90
ALA 1 241
LEU 1 240
GLY 1 168
PRO 1 167
None
None
SC4  1 999 ( 4.7A)
None
None
1.11A 3ozwB-3epf1:
undetectable
3ozwB-3epf1:
22.47
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3TTR_A_LQZA90_1
(LACTOTRANSFERRIN)
3epf PROTEIN VP2
(Enterovirus
C)
3 / 3 PRO 2  53
THR 2  54
LEU 2 262
None
0.40A 3ttrA-3epf2:
undetectable
3ttrA-3epf2:
23.16
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3V81_C_NVPC901_1
(HIV-1 REVERSE
TRANSCRIPTASE P66
SUBUNIT)
3epf PROTEIN VP1
(Enterovirus
C)
4 / 8 VAL 1 242
VAL 1 183
TYR 1 185
TYR 1 155
None
0.69A 3v81C-3epf1:
undetectable
3v81C-3epf1:
18.04
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4DM8_B_REAB1501_1
(RETINOIC ACID
RECEPTOR BETA)
3epf PROTEIN VP1
PROTEIN VP2

(Enterovirus
C)
5 / 12 PHE 1 208
LEU 2 132
ALA 2 133
ARG 1 272
GLY 1 289
None
1.11A 4dm8B-3epf1:
undetectable
4dm8B-3epf1:
19.93
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4EJG_D_NCTD501_1
(CYTOCHROME P450 2A13)
3epf PROTEIN VP2
(Enterovirus
C)
4 / 6 ASN 2  30
ALA 2  28
THR 2  25
LEU 2  16
None
1.05A 4ejgD-3epf2:
undetectable
4ejgD-3epf2:
20.96
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4KLR_B_CHDB503_0
(FERROCHELATASE,
MITOCHONDRIAL)
3epf PROTEIN VP1
PROTEIN VP2

(Enterovirus
C;
Enterovirus
C)
4 / 8 LEU 2 231
PRO 1 273
VAL 1 277
GLY 2 183
None
1.01A 4klrB-3epf2:
undetectable
4klrB-3epf2:
20.42
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4PUO_C_NVPC901_1
(HIV-1 REVERSE
TRANSCRIPTASE, P66
SUBUNIT)
3epf PROTEIN VP1
(Enterovirus
C)
4 / 8 VAL 1 242
VAL 1 183
TYR 1 185
TYR 1 155
None
0.58A 4puoC-3epf1:
undetectable
4puoC-3epf1:
18.04
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4PWD_C_NVPC901_1
(HIV-1 REVERSE
TRANSCRIPTASE, P66
SUBUNIT)
3epf PROTEIN VP1
(Enterovirus
C)
4 / 8 VAL 1 242
VAL 1 183
TYR 1 185
TYR 1 155
None
0.61A 4pwdC-3epf1:
undetectable
4pwdC-3epf1:
18.04
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4XMF_A_HSMA202_1
(NITROPHORIN-7)
3epf PROTEIN VP2
(Enterovirus
C)
3 / 3 ASP 2  57
LEU 2  18
GLY 2  19
None
0.45A 4xmfA-3epf2:
undetectable
4xmfA-3epf2:
18.55
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4ZDY_A_1YNA602_2
(LANOSTEROL 14-ALPHA
DEMETHYLASE)
3epf PROTEIN VP2
(Enterovirus
C)
3 / 3 ALA 2 253
TYR 2  64
PRO 2  56
None
0.68A 4zdyA-3epf2:
undetectable
4zdyA-3epf2:
17.36
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5MXB_A_ML1A222_1
(CLASS 10 PLANT
PATHOGENESIS-RELATED
PROTEIN)
3epf PROTEIN VP2
(Enterovirus
C)
5 / 10 VAL 2 108
ILE 2 252
LEU 2  86
GLY 2 227
ALA 2 126
None
0.98A 5mxbA-3epf2:
undetectable
5mxbA-3epf2:
16.21
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5NKN_A_LOCA201_2
(NEUTROPHIL
GELATINASE-ASSOCIATE
D LIPOCALIN)
3epf PROTEIN VP1
(Enterovirus
C)
3 / 3 VAL 1  77
LYS 1 262
MET 1 261
None
None
SC4  1 999 ( 4.6A)
0.88A 5nknA-3epf1:
undetectable
5nknA-3epf1:
13.78
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5W3J_B_TA1B502_1
(TUBULIN BETA CHAIN)
3epf PROTEIN VP1
PROTEIN VP2

(Enterovirus
C)
4 / 8 VAL 1  47
GLU 1  48
GLY 2 123
LEU 2 233
None
0.94A 5w3jB-3epf1:
undetectable
5w3jB-3epf1:
19.65
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5X6Y_B_SAMB901_0
(MRNA CAPPING ENZYME
P5)
3epf PROTEIN VP2
(Enterovirus
C)
5 / 10 VAL 2 124
GLY 2 123
ALA 2 205
ASN 2 198
ASN 2 202
None
1.10A 5x6yB-3epf2:
undetectable
5x6yB-3epf2:
14.19