SIMILAR PATTERN OF AMINO ACIDS MAPPED TO '3f9u'

List of Similar Pattern of Amino Acids

Hit pattern: 3D amino acid arrangements similar to known drug binding site
Query pattern: Residues from known binding site for annotated drug that match the hit pattern

(Click on the DrReposER ID to view details on interfaces and similar patterns of amino acids)
(Click on the view link on the last column to view superposed patterns of amino acids)

Filter list by:

	DrReposER ID / Desc.	Hit PDBID	Hit Macromolecule	Res. Matches	Interface	HETATM	RMSD	Dali Z-score	Seq. Identity (%)
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.	1L5R_A_RBFA859_1 (GLYCOGEN PHOSPHORYLASE, LIVER FORM)	3f9u	PUTATIVE EXPORTED CYTOCHROME C BIOGENESIS-RELATED PROTEIN (Bacteroides fragilis)	5 / 11	PHE A 623 TYR A 631 ALA A 625 GLY A 624 PHE A 657	None	1.40A	1l5rA-3f9uA: undetectable	1l5rA-3f9uA: 12.32
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.	2H21_B_SAMB802_0 (RIBULOSE-1,5 BISPHOSPHATE CARBOXYLASE/OXYGENAS E)	3f9u	PUTATIVE EXPORTED CYTOCHROME C BIOGENESIS-RELATED PROTEIN (Bacteroides fragilis)	5 / 11	GLY A 661 LEU A 662 PRO A 546 TYR A 654 TYR A 631	None	1.39A	2h21B-3f9uA: undetectable	2h21B-3f9uA: 16.24
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.	2H21_C_SAMC803_0 (RIBULOSE-1,5 BISPHOSPHATE CARBOXYLASE/OXYGENAS E)	3f9u	PUTATIVE EXPORTED CYTOCHROME C BIOGENESIS-RELATED PROTEIN (Bacteroides fragilis)	5 / 11	GLY A 661 LEU A 662 PRO A 546 TYR A 654 TYR A 631	None	1.35A	2h21C-3f9uA: undetectable	2h21C-3f9uA: 16.24
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.	2PNJ_A_CHDA501_0 (FERROCHELATASE, MITOCHONDRIAL)	3f9u	PUTATIVE EXPORTED CYTOCHROME C BIOGENESIS-RELATED PROTEIN (Bacteroides fragilis)	5 / 12	LEU A 549 LEU A 585 PHE A 551 ILE A 634 VAL A 597	None	1.12A	2pnjA-3f9uA: undetectable	2pnjA-3f9uA: 18.70

[["DrReposER ID","Desc.","Hit PDB","Hit molecule","Hit organism","Res. no.","Interface","HETATM","RMSD","Z-score","Seq ID"],["1L5R_A_RBFA859_1","GLYCOGEN PHOSPHORYLASE, LIVER FORM","3f9u","PUTATIVE EXPORTED CYTOCHROME C BIOGENESIS-RELATED PROTEIN","Bacteroides fragilis",5,"PHE A 623;TYR A 631;ALA A 625;GLY A 624;PHE A 657","None","1.40A","1l5rA-3f9uA:undetectable","1l5rA-3f9uA:12.32"],["2H21_B_SAMB802_0","RIBULOSE-1,5 BISPHOSPHATE CARBOXYLASE\/OXYGENASE","3f9u","PUTATIVE EXPORTED CYTOCHROME C BIOGENESIS-RELATED PROTEIN","Bacteroides fragilis",5,"GLY A 661;LEU A 662;PRO A 546;TYR A 654;TYR A 631","None","1.39A","2h21B-3f9uA:undetectable","2h21B-3f9uA:16.24"],["2H21_C_SAMC803_0","RIBULOSE-1,5 BISPHOSPHATE CARBOXYLASE\/OXYGENASE","3f9u","PUTATIVE EXPORTED CYTOCHROME C BIOGENESIS-RELATED PROTEIN","Bacteroides fragilis",5,"GLY A 661;LEU A 662;PRO A 546;TYR A 654;TYR A 631","None","1.35A","2h21C-3f9uA:undetectable","2h21C-3f9uA:16.24"],["2PNJ_A_CHDA501_0","FERROCHELATASE, MITOCHONDRIAL","3f9u","PUTATIVE EXPORTED CYTOCHROME C BIOGENESIS-RELATED PROTEIN","Bacteroides fragilis",5,"LEU A 549;LEU A 585;PHE A 551;ILE A 634;VAL A 597","None","1.12A","2pnjA-3f9uA:undetectable","2pnjA-3f9uA:18.70"]]