SIMILAR PATTERN OF AMINO ACIDS MAPPED TO '3fdu'

List of Similar Pattern of Amino Acids

Hit pattern: 3D amino acid arrangements similar to known drug binding site
Query pattern: Residues from known binding site for annotated drug that match the hit pattern

(Click on the DrReposER ID to view details on interfaces and similar patterns of amino acids)
(Click on the view link on the last column to view superposed patterns of amino acids)
Filter list by:
DrReposER ID / Desc. Hit
PDBID		 Hit
Macromolecule		 Res.
Matches		 Interface HETATM RMSD Dali
Z-score		 Seq.
Identity (%)		 View Dock
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1RBP_A_RTLA183_0
(PLASMA
RETINOL-BINDING
PROTEIN PRECURSOR)		 3fdu PUTATIVE ENOYL-COA
HYDRATASE/ISOMERASE
(Acinetobacter
baumannii) 		5 / 12 LEU A  39
LEU A  97
ALA A 102
ALA A 101
LEU A  24
 None
 1.24A 1rbpA-3fduA:
undetectable		 1rbpA-3fduA:
21.09
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3JB2_A_SAMA1102_0
(STRUCTURAL PROTEIN
VP3)		 3fdu PUTATIVE ENOYL-COA
HYDRATASE/ISOMERASE
(Acinetobacter
baumannii) 		5 / 12 GLY A 151
GLY A 152
ALA A 235
ALA A 102
PRO A  94
 None
None
None
None
GOL  A   1 (-4.3A)
 0.82A 3jb2A-3fduA:
undetectable		 3jb2A-3fduA:
13.99
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3VW7_A_VPXA2001_2
(PROTEINASE-ACTIVATED
RECEPTOR 1, LYSOZYME)		 3fdu PUTATIVE ENOYL-COA
HYDRATASE/ISOMERASE
(Acinetobacter
baumannii) 		4 / 4 PRO A  94
LEU A  41
HIS A  10
LEU A   9
 GOL  A   1 (-4.3A)
None
None
None
 1.30A 3vw7A-3fduA:
undetectable		 3vw7A-3fduA:
20.85
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4DC3_A_ADNA401_2
(ADENOSINE KINASE)		 3fdu PUTATIVE ENOYL-COA
HYDRATASE/ISOMERASE
(Acinetobacter
baumannii) 		4 / 4 LEU A  35
ILE A 123
GLY A  71
PHE A  68
 None
 1.13A 4dc3A-3fduA:
undetectable		 4dc3A-3fduA:
23.08
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4KJL_A_FOLA201_0
(DIHYDROFOLATE
REDUCTASE)		 3fdu PUTATIVE ENOYL-COA
HYDRATASE/ISOMERASE
(Acinetobacter
baumannii) 		5 / 12 ALA A  70
PHE A  68
ILE A  43
LEU A  61
ILE A 123
 None
 1.03A 4kjlA-3fduA:
undetectable		 4kjlA-3fduA:
19.93
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4KM2_B_TOPB202_1
(DIHYDROFOLATE
REDUCTASE)		 3fdu PUTATIVE ENOYL-COA
HYDRATASE/ISOMERASE
(Acinetobacter
baumannii) 		5 / 12 ILE A 119
LEU A 108
VAL A  59
LEU A  61
ILE A 123
 None
 1.03A 4km2B-3fduA:
undetectable		 4km2B-3fduA:
20.45
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4Q5M_A_ROCA1101_1
(PROTEASE)		 3fdu PUTATIVE ENOYL-COA
HYDRATASE/ISOMERASE
(Acinetobacter
baumannii) 		5 / 12 GLY A 114
ASN A  33
ILE A  26
VAL A 121
VAL A 191
 None
 0.94A 4q5mA-3fduA:
undetectable		 4q5mA-3fduA:
22.06
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4QVN_K_BO2K301_1
(PROTEASOME SUBUNIT
BETA TYPE-5
PROTEASOME SUBUNIT
BETA TYPE-6)		 3fdu PUTATIVE ENOYL-COA
HYDRATASE/ISOMERASE
(Acinetobacter
baumannii) 		5 / 9 THR A 206
ALA A 202
ALA A 198
VAL A  56
GLY A  19
 None
 1.10A 4qvnK-3fduA:
undetectable
4qvnL-3fduA:
undetectable		 4qvnK-3fduA:
20.94
4qvnL-3fduA:
21.43
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4X1I_D_LOCD502_1
(TUBULIN BETA CHAIN)		 3fdu PUTATIVE ENOYL-COA
HYDRATASE/ISOMERASE
(Acinetobacter
baumannii) 		5 / 12 LEU A  47
LEU A  22
LEU A  61
ALA A  15
ILE A  26
 None
 0.91A 4x1iD-3fduA:
undetectable		 4x1iD-3fduA:
20.85
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4X1Y_D_LOCD502_2
(TUBULIN BETA CHAIN)		 3fdu PUTATIVE ENOYL-COA
HYDRATASE/ISOMERASE
(Acinetobacter
baumannii) 		5 / 12 LEU A  47
LEU A  22
LEU A  61
ALA A  15
ILE A  26
 None
 0.95A 4x1yD-3fduA:
undetectable		 4x1yD-3fduA:
20.85
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5HFJ_C_SAMC301_0
(ADENINE SPECIFIC DNA
METHYLTRANSFERASE
(DPNA))		 3fdu PUTATIVE ENOYL-COA
HYDRATASE/ISOMERASE
(Acinetobacter
baumannii) 		5 / 12 ASP A 128
ALA A 127
GLN A 183
GLY A 185
THR A 180
 None
 1.41A 5hfjC-3fduA:
undetectable		 5hfjC-3fduA:
23.73
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5HHJ_B_GLYB404_0
(RETRON-TYPE REVERSE
TRANSCRIPTASE)		 3fdu PUTATIVE ENOYL-COA
HYDRATASE/ISOMERASE
(Acinetobacter
baumannii) 		4 / 4 GLN A 199
ALA A 202
GLN A 203
THR A 206
 None
 0.66A 5hhjB-3fduA:
undetectable		 5hhjB-3fduA:
20.30
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5IFU_B_GBMB801_1
(PROLINE--TRNA LIGASE)		 3fdu PUTATIVE ENOYL-COA
HYDRATASE/ISOMERASE
(Acinetobacter
baumannii) 		5 / 9 TYR A  40
LEU A  97
GLU A 150
ILE A 123
GLY A 120
 None
 1.40A 5ifuB-3fduA:
undetectable		 5ifuB-3fduA:
19.37
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5ND2_B_TA1B601_1
(TUBULIN BETA-2B
CHAIN)		 3fdu PUTATIVE ENOYL-COA
HYDRATASE/ISOMERASE
(Acinetobacter
baumannii) 		5 / 12 VAL A  56
LEU A  13
ALA A  50
ARG A  62
LEU A 108
 None
 0.97A 5nd2B-3fduA:
undetectable		 5nd2B-3fduA:
20.85
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
6EQP_A_BUWA601_1
(CHOLINESTERASE)		 3fdu PUTATIVE ENOYL-COA
HYDRATASE/ISOMERASE
(Acinetobacter
baumannii) 		4 / 8 GLY A 151
GLN A 126
THR A 122
TYR A  40
 None
 1.01A 6eqpA-3fduA:
undetectable		 6eqpA-3fduA:
16.17