SIMILAR PATTERN OF AMINO ACIDS MAPPED TO '3ffv'

List of Similar Pattern of Amino Acids

Hit pattern: 3D amino acid arrangements similar to known drug binding site

Query pattern: Residues from known binding site for annotated drug that match the hit pattern


(Click on the DrReposER ID to view details on interfaces and similar patterns of amino acids)
(Click on the view link on the last column to view superposed patterns of amino acids)
Filter list by:
DrReposER ID / Desc. Hit
PDBID
Hit
Macromolecule
Res.
Matches
Interface HETATM RMSD Dali
Z-score
Seq.
Identity (%)
View Dock
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1GX8_A_RTLA1163_0
(BETA-LACTOGLOBULIN)
3ffv PROTEIN SYD
(Escherichia
coli)
5 / 9 LEU A 101
LEU A 116
GLU A 156
ILE A  77
PHE A 109
None
1.46A 1gx8A-3ffvA:
undetectable
1gx8A-3ffvA:
21.81
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1NT2_A_SAMA301_1
(FIBRILLARIN-LIKE
PRE-RRNA PROCESSING
PROTEIN)
3ffv PROTEIN SYD
(Escherichia
coli)
3 / 3 THR A  79
GLU A  66
ASP A  70
None
0.79A 1nt2A-3ffvA:
undetectable
1nt2A-3ffvA:
21.24
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1V55_P_CHDP4525_0
(CYTOCHROME C OXIDASE
POLYPEPTIDE I
CYTOCHROME C OXIDASE
POLYPEPTIDE III)
3ffv PROTEIN SYD
(Escherichia
coli)
4 / 7 LEU A 177
THR A  13
TYR A  16
TRP A 104
None
1.16A 1v55C-3ffvA:
undetectable
1v55N-3ffvA:
undetectable
1v55P-3ffvA:
undetectable
1v55C-3ffvA:
20.00
1v55N-3ffvA:
14.12
1v55P-3ffvA:
20.00
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2Y69_N_CHDN1517_0
(CYTOCHROME C OXIDASE
SUBUNIT 1
CYTOCHROME C OXIDASE
SUBUNIT 3)
3ffv PROTEIN SYD
(Escherichia
coli)
4 / 8 LEU A 177
THR A  13
TYR A  16
TRP A 104
None
1.11A 2y69C-3ffvA:
undetectable
2y69N-3ffvA:
undetectable
2y69P-3ffvA:
undetectable
2y69C-3ffvA:
20.00
2y69N-3ffvA:
14.12
2y69P-3ffvA:
20.00
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3ASN_P_CHDP1525_0
(CYTOCHROME C OXIDASE
SUBUNIT 1
CYTOCHROME C OXIDASE
SUBUNIT 3)
3ffv PROTEIN SYD
(Escherichia
coli)
4 / 8 LEU A 177
THR A  13
TYR A  16
TRP A 104
None
1.14A 3asnC-3ffvA:
undetectable
3asnN-3ffvA:
undetectable
3asnP-3ffvA:
undetectable
3asnC-3ffvA:
20.00
3asnN-3ffvA:
14.12
3asnP-3ffvA:
20.00
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3ASO_C_CHDC525_0
(CYTOCHROME C OXIDASE
SUBUNIT 1
CYTOCHROME C OXIDASE
SUBUNIT 3)
3ffv PROTEIN SYD
(Escherichia
coli)
4 / 8 THR A  13
TYR A  16
TRP A 104
LEU A 177
None
1.16A 3asoA-3ffvA:
undetectable
3asoC-3ffvA:
undetectable
3asoP-3ffvA:
undetectable
3asoA-3ffvA:
14.12
3asoC-3ffvA:
20.00
3asoP-3ffvA:
20.00
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3ASO_P_CHDP1525_0
(CYTOCHROME C OXIDASE
SUBUNIT 1
CYTOCHROME C OXIDASE
SUBUNIT 3)
3ffv PROTEIN SYD
(Escherichia
coli)
4 / 8 LEU A 177
THR A  13
TYR A  16
TRP A 104
None
1.14A 3asoC-3ffvA:
undetectable
3asoN-3ffvA:
undetectable
3asoP-3ffvA:
undetectable
3asoC-3ffvA:
20.00
3asoN-3ffvA:
14.12
3asoP-3ffvA:
20.00
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3LM8_D_VIBD223_1
(THIAMINE
PYROPHOSPHOKINASE)
3ffv PROTEIN SYD
(Escherichia
coli)
4 / 8 HIS A 119
LEU A 177
LEU A  98
SER A 145
None
0.97A 3lm8B-3ffvA:
undetectable
3lm8D-3ffvA:
undetectable
3lm8B-3ffvA:
23.01
3lm8D-3ffvA:
23.01
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3WG7_C_CHDC306_0
(CYTOCHROME C OXIDASE
SUBUNIT 1
CYTOCHROME C OXIDASE
SUBUNIT 3)
3ffv PROTEIN SYD
(Escherichia
coli)
4 / 8 THR A  13
TYR A  16
TRP A 104
LEU A 177
None
1.13A 3wg7A-3ffvA:
undetectable
3wg7C-3ffvA:
undetectable
3wg7P-3ffvA:
undetectable
3wg7A-3ffvA:
14.12
3wg7C-3ffvA:
20.00
3wg7P-3ffvA:
20.00
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3WG7_P_CHDP307_0
(CYTOCHROME C OXIDASE
SUBUNIT 1
CYTOCHROME C OXIDASE
SUBUNIT 3)
3ffv PROTEIN SYD
(Escherichia
coli)
4 / 8 LEU A 177
THR A  13
TYR A  16
TRP A 104
None
1.12A 3wg7C-3ffvA:
undetectable
3wg7N-3ffvA:
undetectable
3wg7P-3ffvA:
undetectable
3wg7C-3ffvA:
20.00
3wg7N-3ffvA:
14.12
3wg7P-3ffvA:
20.00
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3X2Q_C_CHDC305_0
(CYTOCHROME C OXIDASE
SUBUNIT 1
CYTOCHROME C OXIDASE
SUBUNIT 3)
3ffv PROTEIN SYD
(Escherichia
coli)
4 / 8 THR A  13
TYR A  16
TRP A 104
LEU A 177
None
1.20A 3x2qA-3ffvA:
undetectable
3x2qC-3ffvA:
undetectable
3x2qP-3ffvA:
undetectable
3x2qA-3ffvA:
14.12
3x2qC-3ffvA:
20.00
3x2qP-3ffvA:
20.00
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3X2Q_P_CHDP308_0
(CYTOCHROME C OXIDASE
SUBUNIT 1
CYTOCHROME C OXIDASE
SUBUNIT 3)
3ffv PROTEIN SYD
(Escherichia
coli)
4 / 8 LEU A 177
THR A  13
TYR A  16
TRP A 104
None
1.14A 3x2qC-3ffvA:
undetectable
3x2qN-3ffvA:
undetectable
3x2qP-3ffvA:
undetectable
3x2qC-3ffvA:
20.00
3x2qN-3ffvA:
14.12
3x2qP-3ffvA:
20.00
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5B1A_C_CHDC305_0
(CYTOCHROME C OXIDASE
SUBUNIT 1
CYTOCHROME C OXIDASE
SUBUNIT 3)
3ffv PROTEIN SYD
(Escherichia
coli)
4 / 8 THR A  13
TYR A  16
TRP A 104
LEU A 177
None
1.15A 5b1aA-3ffvA:
undetectable
5b1aC-3ffvA:
undetectable
5b1aP-3ffvA:
undetectable
5b1aA-3ffvA:
14.12
5b1aC-3ffvA:
20.00
5b1aP-3ffvA:
20.00
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5B1B_C_CHDC307_0
(CYTOCHROME C OXIDASE
SUBUNIT 1
CYTOCHROME C OXIDASE
SUBUNIT 3)
3ffv PROTEIN SYD
(Escherichia
coli)
4 / 8 THR A  13
TYR A  16
TRP A 104
LEU A 177
None
1.15A 5b1bA-3ffvA:
undetectable
5b1bC-3ffvA:
undetectable
5b1bP-3ffvA:
undetectable
5b1bA-3ffvA:
14.12
5b1bC-3ffvA:
20.00
5b1bP-3ffvA:
20.00
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5B3S_C_CHDC301_0
(CYTOCHROME C OXIDASE
SUBUNIT 1
CYTOCHROME C OXIDASE
SUBUNIT 3)
3ffv PROTEIN SYD
(Escherichia
coli)
4 / 8 THR A  13
TYR A  16
TRP A 104
LEU A 177
None
1.17A 5b3sA-3ffvA:
undetectable
5b3sC-3ffvA:
undetectable
5b3sP-3ffvA:
undetectable
5b3sA-3ffvA:
14.12
5b3sC-3ffvA:
20.00
5b3sP-3ffvA:
20.00
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5IY5_P_CHDP301_0
(CYTOCHROME C OXIDASE
SUBUNIT 1
CYTOCHROME C OXIDASE
SUBUNIT 3)
3ffv PROTEIN SYD
(Escherichia
coli)
4 / 8 LEU A 177
THR A  13
TYR A  16
TRP A 104
None
1.17A 5iy5C-3ffvA:
undetectable
5iy5N-3ffvA:
undetectable
5iy5P-3ffvA:
undetectable
5iy5C-3ffvA:
21.52
5iy5N-3ffvA:
14.12
5iy5P-3ffvA:
21.52
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5KSN_A_NIZA809_1
(CATALASE-PEROXIDASE)
3ffv PROTEIN SYD
(Escherichia
coli)
5 / 9 ARG A 163
GLY A 159
GLN A 123
LEU A 128
THR A 122
None
1.48A 5ksnA-3ffvA:
undetectable
5ksnA-3ffvA:
13.60
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5SYI_B_NIZB805_1
(CATALASE-PEROXIDASE)
3ffv PROTEIN SYD
(Escherichia
coli)
5 / 9 ARG A 163
GLY A 159
GLN A 123
LEU A 128
THR A 122
None
1.46A 5syiB-3ffvA:
undetectable
5syiB-3ffvA:
13.60
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5WAU_C_CHDC301_0
(CYTOCHROME C OXIDASE
SUBUNIT 1
CYTOCHROME C OXIDASE
SUBUNIT 3)
3ffv PROTEIN SYD
(Escherichia
coli)
4 / 8 THR A  13
TYR A  16
TRP A 104
LEU A 177
None
1.18A 5wauA-3ffvA:
undetectable
5wauC-3ffvA:
undetectable
5wauc-3ffvA:
undetectable
5wauA-3ffvA:
14.12
5wauC-3ffvA:
20.00
5wauc-3ffvA:
20.00
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5XDQ_C_CHDC301_0
(CYTOCHROME C OXIDASE
SUBUNIT 1
CYTOCHROME C OXIDASE
SUBUNIT 3)
3ffv PROTEIN SYD
(Escherichia
coli)
4 / 8 THR A  13
TYR A  16
TRP A 104
LEU A 177
None
1.18A 5xdqA-3ffvA:
undetectable
5xdqC-3ffvA:
undetectable
5xdqP-3ffvA:
undetectable
5xdqA-3ffvA:
14.12
5xdqC-3ffvA:
20.00
5xdqP-3ffvA:
20.00
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5XDQ_P_CHDP301_0
(CYTOCHROME C OXIDASE
SUBUNIT 1
CYTOCHROME C OXIDASE
SUBUNIT 3)
3ffv PROTEIN SYD
(Escherichia
coli)
4 / 8 LEU A 177
THR A  13
TYR A  16
TRP A 104
None
1.13A 5xdqC-3ffvA:
undetectable
5xdqN-3ffvA:
undetectable
5xdqP-3ffvA:
undetectable
5xdqC-3ffvA:
20.00
5xdqN-3ffvA:
14.12
5xdqP-3ffvA:
20.00
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5XDX_P_CHDP301_0
(CYTOCHROME C OXIDASE
SUBUNIT 1
CYTOCHROME C OXIDASE
SUBUNIT 3)
3ffv PROTEIN SYD
(Escherichia
coli)
4 / 8 LEU A 177
THR A  13
TYR A  16
TRP A 104
None
1.17A 5xdxC-3ffvA:
undetectable
5xdxN-3ffvA:
undetectable
5xdxP-3ffvA:
undetectable
5xdxC-3ffvA:
21.52
5xdxN-3ffvA:
14.12
5xdxP-3ffvA:
21.52
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5Z84_C_CHDC301_0
(CYTOCHROME C OXIDASE
SUBUNIT 1
CYTOCHROME C OXIDASE
SUBUNIT 3)
3ffv PROTEIN SYD
(Escherichia
coli)
4 / 8 THR A  13
TYR A  16
TRP A 104
LEU A 177
None
1.17A 5z84A-3ffvA:
undetectable
5z84C-3ffvA:
undetectable
5z84P-3ffvA:
undetectable
5z84A-3ffvA:
14.12
5z84C-3ffvA:
20.00
5z84P-3ffvA:
20.00
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5Z85_C_CHDC301_0
(CYTOCHROME C OXIDASE
SUBUNIT 1
CYTOCHROME C OXIDASE
SUBUNIT 3)
3ffv PROTEIN SYD
(Escherichia
coli)
4 / 8 THR A  13
TYR A  16
TRP A 104
LEU A 177
None
1.18A 5z85A-3ffvA:
undetectable
5z85C-3ffvA:
undetectable
5z85P-3ffvA:
undetectable
5z85A-3ffvA:
14.12
5z85C-3ffvA:
20.00
5z85P-3ffvA:
20.00
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5Z85_P_CHDP301_0
(CYTOCHROME C OXIDASE
SUBUNIT 1
CYTOCHROME C OXIDASE
SUBUNIT 3)
3ffv PROTEIN SYD
(Escherichia
coli)
4 / 7 LEU A 177
THR A  13
TYR A  16
TRP A 104
None
1.17A 5z85C-3ffvA:
undetectable
5z85N-3ffvA:
undetectable
5z85P-3ffvA:
undetectable
5z85C-3ffvA:
20.00
5z85N-3ffvA:
14.12
5z85P-3ffvA:
20.00
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5Z86_C_CHDC301_0
(CYTOCHROME C OXIDASE
SUBUNIT 1
CYTOCHROME C OXIDASE
SUBUNIT 3)
3ffv PROTEIN SYD
(Escherichia
coli)
4 / 8 THR A  13
TYR A  16
TRP A 104
LEU A 177
None
1.19A 5z86A-3ffvA:
undetectable
5z86C-3ffvA:
undetectable
5z86P-3ffvA:
undetectable
5z86A-3ffvA:
14.12
5z86C-3ffvA:
20.00
5z86P-3ffvA:
20.00
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5Z86_P_CHDP301_0
(CYTOCHROME C OXIDASE
SUBUNIT 1
CYTOCHROME C OXIDASE
SUBUNIT 3)
3ffv PROTEIN SYD
(Escherichia
coli)
4 / 8 LEU A 177
THR A  13
TYR A  16
TRP A 104
None
1.14A 5z86C-3ffvA:
undetectable
5z86N-3ffvA:
undetectable
5z86P-3ffvA:
undetectable
5z86C-3ffvA:
20.00
5z86N-3ffvA:
14.12
5z86P-3ffvA:
20.00
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5ZCO_C_CHDC301_0
(CYTOCHROME C OXIDASE
SUBUNIT 1
CYTOCHROME C OXIDASE
SUBUNIT 3)
3ffv PROTEIN SYD
(Escherichia
coli)
4 / 8 THR A  13
TYR A  16
TRP A 104
LEU A 177
None
1.18A 5zcoA-3ffvA:
undetectable
5zcoC-3ffvA:
undetectable
5zcoP-3ffvA:
undetectable
5zcoA-3ffvA:
14.12
5zcoC-3ffvA:
20.00
5zcoP-3ffvA:
20.00
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5ZCO_P_CHDP301_0
(CYTOCHROME C OXIDASE
SUBUNIT 1
CYTOCHROME C OXIDASE
SUBUNIT 3)
3ffv PROTEIN SYD
(Escherichia
coli)
4 / 8 LEU A 177
THR A  13
TYR A  16
TRP A 104
None
1.14A 5zcoC-3ffvA:
undetectable
5zcoN-3ffvA:
undetectable
5zcoP-3ffvA:
undetectable
5zcoC-3ffvA:
20.00
5zcoN-3ffvA:
14.12
5zcoP-3ffvA:
20.00
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5ZCQ_C_CHDC301_0
(CYTOCHROME C OXIDASE
SUBUNIT 1
CYTOCHROME C OXIDASE
SUBUNIT 3)
3ffv PROTEIN SYD
(Escherichia
coli)
4 / 8 THR A  13
TYR A  16
TRP A 104
LEU A 177
None
1.16A 5zcqA-3ffvA:
undetectable
5zcqC-3ffvA:
undetectable
5zcqP-3ffvA:
undetectable
5zcqA-3ffvA:
14.12
5zcqC-3ffvA:
20.00
5zcqP-3ffvA:
20.00
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
6CFQ_B_NIZB809_1
(CATALASE-PEROXIDASE)
3ffv PROTEIN SYD
(Escherichia
coli)
5 / 9 ARG A 163
GLY A 159
GLN A 123
LEU A 128
THR A 122
None
1.47A 6cfqB-3ffvA:
1.3
6cfqB-3ffvA:
15.43