SIMILAR PATTERN OF AMINO ACIDS MAPPED TO '3fkd'

List of Similar Pattern of Amino Acids

Hit pattern: 3D amino acid arrangements similar to known drug binding site

Query pattern: Residues from known binding site for annotated drug that match the hit pattern


(Click on the DrReposER ID to view details on interfaces and similar patterns of amino acids)
(Click on the view link on the last column to view superposed patterns of amino acids)
Filter list by:
DrReposER ID / Desc. Hit
PDBID
Hit
Macromolecule
Res.
Matches
Interface HETATM RMSD Dali
Z-score
Seq.
Identity (%)
View Dock
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1NX9_A_AICA5001_1
(ALPHA-AMINO ACID
ESTER HYDROLASE)
3fkd L-THREONINE-O-3-PHOS
PHATE DECARBOXYLASE

(Porphyromonas
gingivalis)
4 / 8 ARG A 218
GLN A  82
HIS A 111
SER A  90
None
1.09A 1nx9A-3fkdA:
undetectable
1nx9A-3fkdA:
18.69
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1NX9_B_AICB5002_1
(ALPHA-AMINO ACID
ESTER HYDROLASE)
3fkd L-THREONINE-O-3-PHOS
PHATE DECARBOXYLASE

(Porphyromonas
gingivalis)
4 / 8 ARG A 218
GLN A  82
HIS A 111
SER A  90
None
1.10A 1nx9B-3fkdA:
undetectable
1nx9B-3fkdA:
18.69
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1NX9_C_AICC5003_1
(ALPHA-AMINO ACID
ESTER HYDROLASE)
3fkd L-THREONINE-O-3-PHOS
PHATE DECARBOXYLASE

(Porphyromonas
gingivalis)
4 / 8 ARG A 218
GLN A  82
HIS A 111
SER A  90
None
1.12A 1nx9C-3fkdA:
undetectable
1nx9C-3fkdA:
18.69
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1NX9_D_AICD5004_1
(ALPHA-AMINO ACID
ESTER HYDROLASE)
3fkd L-THREONINE-O-3-PHOS
PHATE DECARBOXYLASE

(Porphyromonas
gingivalis)
4 / 8 ARG A 218
GLN A  82
HIS A 111
SER A  90
None
1.11A 1nx9D-3fkdA:
undetectable
1nx9D-3fkdA:
18.69
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2EJ3_A_GBNA2414_1
(BRANCHED-CHAIN AMINO
ACID
AMINOTRANSFERASE)
3fkd L-THREONINE-O-3-PHOS
PHATE DECARBOXYLASE

(Porphyromonas
gingivalis)
4 / 8 GLY A 207
THR A  77
ALA A  78
ALA A  79
None
0.58A 2ej3A-3fkdA:
undetectable
2ej3A-3fkdA:
21.62
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2O7O_A_DXTA222_1
(TETRACYCLINE
REPRESSOR PROTEIN
CLASS D)
3fkd L-THREONINE-O-3-PHOS
PHATE DECARBOXYLASE

(Porphyromonas
gingivalis)
5 / 12 ASN A 140
PHE A  99
PRO A 202
THR A  22
VAL A  24
None
1.45A 2o7oA-3fkdA:
undetectable
2o7oA-3fkdA:
22.22
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2W98_B_P1ZB1359_1
(PROSTAGLANDIN
REDUCTASE 2)
3fkd L-THREONINE-O-3-PHOS
PHATE DECARBOXYLASE

(Porphyromonas
gingivalis)
4 / 6 THR A 337
GLU A 336
MET A 296
PHE A 331
None
1.19A 2w98B-3fkdA:
3.9
2w98B-3fkdA:
19.04
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2XPV_A_MIYA1209_1
(TETRACYCLINE
REPRESSOR PROTEIN
CLASS D)
3fkd L-THREONINE-O-3-PHOS
PHATE DECARBOXYLASE

(Porphyromonas
gingivalis)
5 / 12 ASN A 140
PHE A  99
PRO A 202
THR A  22
VAL A  24
None
1.49A 2xpvA-3fkdA:
undetectable
2xpvA-3fkdA:
22.22
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2XRL_A_DXTA1211_1
(TETRACYCLINE
REPRESSOR PROTEIN
CLASS D)
3fkd L-THREONINE-O-3-PHOS
PHATE DECARBOXYLASE

(Porphyromonas
gingivalis)
5 / 12 ASN A 140
PHE A  99
PRO A 202
THR A  22
VAL A  24
None
1.41A 2xrlA-3fkdA:
undetectable
2xrlA-3fkdA:
22.67
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3EKY_A_DR7A100_2
(PROTEASE)
3fkd L-THREONINE-O-3-PHOS
PHATE DECARBOXYLASE

(Porphyromonas
gingivalis)
5 / 9 ARG A  56
ASP A 166
GLY A  75
ILE A 206
ILE A 209
None
1.22A 3ekyB-3fkdA:
undetectable
3ekyB-3fkdA:
15.38
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3FI0_M_TRPM1001_0
(TRYPTOPHANYL-TRNA
SYNTHETASE)
3fkd L-THREONINE-O-3-PHOS
PHATE DECARBOXYLASE

(Porphyromonas
gingivalis)
5 / 9 GLY A  53
GLN A  57
ILE A 233
VAL A 228
VAL A  72
None
1.41A 3fi0M-3fkdA:
undetectable
3fi0M-3fkdA:
24.48
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3FI0_O_TRPO1001_0
(TRYPTOPHANYL-TRNA
SYNTHETASE)
3fkd L-THREONINE-O-3-PHOS
PHATE DECARBOXYLASE

(Porphyromonas
gingivalis)
5 / 9 GLY A  53
GLN A  57
ILE A 233
VAL A 228
VAL A  72
None
1.41A 3fi0O-3fkdA:
undetectable
3fi0O-3fkdA:
24.48
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3JQA_A_DX4A270_0
(PTERIDINE REDUCTASE
1)
3fkd L-THREONINE-O-3-PHOS
PHATE DECARBOXYLASE

(Porphyromonas
gingivalis)
4 / 6 ARG A 319
SER A  98
PHE A  99
ASP A 104
None
1.44A 3jqaA-3fkdA:
undetectable
3jqaA-3fkdA:
22.46
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3JQA_B_DX4B270_0
(PTERIDINE REDUCTASE
1)
3fkd L-THREONINE-O-3-PHOS
PHATE DECARBOXYLASE

(Porphyromonas
gingivalis)
4 / 6 ARG A 319
SER A  98
PHE A  99
ASP A 104
None
1.43A 3jqaB-3fkdA:
undetectable
3jqaB-3fkdA:
22.46
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3JQA_C_DX4C270_0
(PTERIDINE REDUCTASE
1)
3fkd L-THREONINE-O-3-PHOS
PHATE DECARBOXYLASE

(Porphyromonas
gingivalis)
4 / 6 ARG A 319
SER A  98
PHE A  99
ASP A 104
None
1.41A 3jqaC-3fkdA:
3.6
3jqaC-3fkdA:
22.46
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3JQA_D_DX4D270_0
(PTERIDINE REDUCTASE
1)
3fkd L-THREONINE-O-3-PHOS
PHATE DECARBOXYLASE

(Porphyromonas
gingivalis)
4 / 6 ARG A 319
SER A  98
PHE A  99
ASP A 104
None
1.42A 3jqaD-3fkdA:
undetectable
3jqaD-3fkdA:
22.46
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3KO0_A_TFPA202_1
(PROTEIN S100-A4)
3fkd L-THREONINE-O-3-PHOS
PHATE DECARBOXYLASE

(Porphyromonas
gingivalis)
5 / 12 LEU A 146
ILE A 122
CYH A 133
PHE A 132
LEU A 154
None
1.20A 3ko0A-3fkdA:
undetectable
3ko0B-3fkdA:
undetectable
3ko0C-3fkdA:
undetectable
3ko0D-3fkdA:
undetectable
3ko0A-3fkdA:
12.82
3ko0B-3fkdA:
12.82
3ko0C-3fkdA:
12.82
3ko0D-3fkdA:
12.82
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3KO0_I_TFPI202_1
(PROTEIN S100-A4)
3fkd L-THREONINE-O-3-PHOS
PHATE DECARBOXYLASE

(Porphyromonas
gingivalis)
5 / 12 LEU A 146
ILE A 122
CYH A 133
PHE A 132
LEU A 154
None
1.21A 3ko0G-3fkdA:
undetectable
3ko0H-3fkdA:
undetectable
3ko0I-3fkdA:
undetectable
3ko0J-3fkdA:
undetectable
3ko0G-3fkdA:
12.82
3ko0H-3fkdA:
12.82
3ko0I-3fkdA:
12.82
3ko0J-3fkdA:
12.82
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3KO0_J_TFPJ202_1
(PROTEIN S100-A4)
3fkd L-THREONINE-O-3-PHOS
PHATE DECARBOXYLASE

(Porphyromonas
gingivalis)
5 / 11 LEU A 154
LEU A 146
ILE A 122
CYH A 133
PHE A 132
None
1.23A 3ko0A-3fkdA:
undetectable
3ko0B-3fkdA:
undetectable
3ko0I-3fkdA:
undetectable
3ko0J-3fkdA:
undetectable
3ko0A-3fkdA:
12.82
3ko0B-3fkdA:
12.82
3ko0I-3fkdA:
12.82
3ko0J-3fkdA:
12.82
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3KO0_K_TFPK202_1
(PROTEIN S100-A4)
3fkd L-THREONINE-O-3-PHOS
PHATE DECARBOXYLASE

(Porphyromonas
gingivalis)
5 / 12 LEU A 146
ILE A 122
CYH A 133
PHE A 132
LEU A 154
None
1.18A 3ko0K-3fkdA:
undetectable
3ko0L-3fkdA:
undetectable
3ko0S-3fkdA:
undetectable
3ko0T-3fkdA:
undetectable
3ko0K-3fkdA:
12.82
3ko0L-3fkdA:
12.82
3ko0S-3fkdA:
12.82
3ko0T-3fkdA:
12.82
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3KO0_L_TFPL202_1
(PROTEIN S100-A4)
3fkd L-THREONINE-O-3-PHOS
PHATE DECARBOXYLASE

(Porphyromonas
gingivalis)
5 / 12 LEU A 154
LEU A 146
ILE A 122
CYH A 133
PHE A 132
None
1.18A 3ko0K-3fkdA:
undetectable
3ko0L-3fkdA:
undetectable
3ko0M-3fkdA:
undetectable
3ko0N-3fkdA:
undetectable
3ko0K-3fkdA:
12.82
3ko0L-3fkdA:
12.82
3ko0M-3fkdA:
12.82
3ko0N-3fkdA:
12.82
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3KO0_M_TFPM202_1
(PROTEIN S100-A4)
3fkd L-THREONINE-O-3-PHOS
PHATE DECARBOXYLASE

(Porphyromonas
gingivalis)
5 / 12 LEU A 146
ILE A 122
CYH A 133
PHE A 132
LEU A 154
None
1.21A 3ko0M-3fkdA:
undetectable
3ko0N-3fkdA:
undetectable
3ko0O-3fkdA:
undetectable
3ko0P-3fkdA:
undetectable
3ko0M-3fkdA:
12.82
3ko0N-3fkdA:
12.82
3ko0O-3fkdA:
12.82
3ko0P-3fkdA:
12.82
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3KO0_P_TFPP202_1
(PROTEIN S100-A4)
3fkd L-THREONINE-O-3-PHOS
PHATE DECARBOXYLASE

(Porphyromonas
gingivalis)
5 / 12 LEU A 154
LEU A 146
ILE A 122
CYH A 133
PHE A 132
None
1.15A 3ko0M-3fkdA:
undetectable
3ko0N-3fkdA:
undetectable
3ko0O-3fkdA:
undetectable
3ko0P-3fkdA:
undetectable
3ko0M-3fkdA:
12.82
3ko0N-3fkdA:
12.82
3ko0O-3fkdA:
12.82
3ko0P-3fkdA:
12.82
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3REM_A_SALA301_1
(SALICYLATE
BIOSYNTHESIS PROTEIN
PCHB)
3fkd L-THREONINE-O-3-PHOS
PHATE DECARBOXYLASE

(Porphyromonas
gingivalis)
4 / 8 VAL A 192
TYR A  81
ILE A  83
GLN A  82
None
1.01A 3remA-3fkdA:
undetectable
3remA-3fkdA:
14.86
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3REM_B_SALB301_1
(SALICYLATE
BIOSYNTHESIS PROTEIN
PCHB)
3fkd L-THREONINE-O-3-PHOS
PHATE DECARBOXYLASE

(Porphyromonas
gingivalis)
4 / 8 VAL A 192
TYR A  81
ILE A  83
GLN A  82
None
0.99A 3remB-3fkdA:
undetectable
3remB-3fkdA:
14.86
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4DC3_B_2FAB401_2
(ADENOSINE KINASE)
3fkd L-THREONINE-O-3-PHOS
PHATE DECARBOXYLASE

(Porphyromonas
gingivalis)
4 / 5 LEU A  71
ILE A  83
ALA A 211
PHE A 215
None
0.91A 4dc3B-3fkdA:
3.0
4dc3B-3fkdA:
20.86
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4NED_A_PFNA709_1
(LACTOTRANSFERRIN)
3fkd L-THREONINE-O-3-PHOS
PHATE DECARBOXYLASE

(Porphyromonas
gingivalis)
4 / 6 ASP A 166
VAL A 170
ALA A  79
PHE A  80
None
1.16A 4nedA-3fkdA:
undetectable
4nedA-3fkdA:
21.29
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4V2G_B_CTCB222_0
(TETRACYCLINE
REPRESSOR PROTEIN
CLASS D)
3fkd L-THREONINE-O-3-PHOS
PHATE DECARBOXYLASE

(Porphyromonas
gingivalis)
5 / 12 ASN A 140
PHE A  99
PRO A 202
THR A  22
VAL A  24
None
1.42A 4v2gB-3fkdA:
undetectable
4v2gB-3fkdA:
22.22
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5M35_B_BEZB302_0
(14-3-3 PROTEIN
ZETA/DELTA)
3fkd L-THREONINE-O-3-PHOS
PHATE DECARBOXYLASE

(Porphyromonas
gingivalis)
3 / 3 MET A  58
GLN A  57
ARG A  56
None
1.12A 5m35B-3fkdA:
undetectable
5m35B-3fkdA:
22.84
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5QH8_A_ACTA302_0
(PEROXISOMAL COENZYME
A DIPHOSPHATASE
NUDT7)
3fkd L-THREONINE-O-3-PHOS
PHATE DECARBOXYLASE

(Porphyromonas
gingivalis)
3 / 3 CYH A 114
MET A 130
ASN A 129
None
1.36A 5qh8A-3fkdA:
undetectable
5qh8A-3fkdA:
20.11
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
6FN9_A_BEZA302_0
(14-3-3 PROTEIN
ZETA/DELTA)
3fkd L-THREONINE-O-3-PHOS
PHATE DECARBOXYLASE

(Porphyromonas
gingivalis)
3 / 3 MET A  58
GLN A  57
ARG A  56
None
1.14A 6fn9A-3fkdA:
undetectable
6fn9A-3fkdA:
21.31
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
6FNA_B_BEZB302_0
(14-3-3 PROTEIN
ZETA/DELTA)
3fkd L-THREONINE-O-3-PHOS
PHATE DECARBOXYLASE

(Porphyromonas
gingivalis)
3 / 3 MET A  58
GLN A  57
ARG A  56
None
1.14A 6fnaB-3fkdA:
undetectable
6fnaB-3fkdA:
21.31
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
6FNB_A_BEZA301_0
(14-3-3 PROTEIN
ZETA/DELTA)
3fkd L-THREONINE-O-3-PHOS
PHATE DECARBOXYLASE

(Porphyromonas
gingivalis)
3 / 3 MET A  58
GLN A  57
ARG A  56
None
1.13A 6fnbA-3fkdA:
undetectable
6fnbA-3fkdA:
21.31
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
6NJ9_K_SAMK500_0
(HISTONE-LYSINE
N-METHYLTRANSFERASE,
H3 LYSINE-79
SPECIFIC)
3fkd L-THREONINE-O-3-PHOS
PHATE DECARBOXYLASE

(Porphyromonas
gingivalis)
5 / 12 GLY A  75
GLY A 207
VAL A 192
ALA A 232
PHE A  80
None
1.04A 6nj9K-3fkdA:
4.2
6nj9K-3fkdA:
21.17